BLASTX nr result

ID: Glycyrrhiza24_contig00017089 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017089
         (248 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635896.1| hypothetical protein MTR_016s1001, partial [...   116   2e-24
ref|XP_003635897.1| Cc-nbs-lrr resistance protein [Medicago trun...   107   8e-22
ref|XP_003621740.1| Cc-nbs-lrr resistance protein [Medicago trun...    89   5e-16
ref|XP_003626885.1| Cc-nbs-lrr resistance protein [Medicago trun...    85   5e-15
ref|XP_003626903.1| NBS resistance protein [Medicago truncatula]...    80   2e-13

>ref|XP_003635896.1| hypothetical protein MTR_016s1001, partial [Medicago truncatula]
           gi|355501831|gb|AES83034.1| hypothetical protein
           MTR_016s1001, partial [Medicago truncatula]
          Length = 109

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/73 (72%), Positives = 62/73 (84%)
 Frame = +3

Query: 6   PDKMCDLLSLEHIKILGCHKLASLPDRMSYLTNLKTLEISDCPLLVERCQRETGADWPKI 185
           P KMCD+LSL+HIK++GCHKLASLP  M  LTNL TLEI DCPLLVERCQ ETG DWP+I
Sbjct: 1   PSKMCDMLSLQHIKMMGCHKLASLPKEMVNLTNLVTLEIWDCPLLVERCQSETGVDWPQI 60

Query: 186 SKIQSRILKKNER 224
           S +Q+RI+K+N R
Sbjct: 61  SHVQNRIMKQNLR 73


>ref|XP_003635897.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355501832|gb|AES83035.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1026

 Score =  107 bits (268), Expect = 8e-22
 Identities = 49/75 (65%), Positives = 59/75 (78%)
 Frame = +3

Query: 3    LPDKMCDLLSLEHIKILGCHKLASLPDRMSYLTNLKTLEISDCPLLVERCQRETGADWPK 182
            LP KMCDL SL+H+K++GCHKLASLP  M  L  L TLEI DCPLLVERCQ ETG DWP+
Sbjct: 952  LPQKMCDLSSLQHVKMMGCHKLASLPKEMVNLNKLVTLEIWDCPLLVERCQSETGVDWPQ 1011

Query: 183  ISKIQSRILKKNERR 227
            +  +Q+ ILK+N R+
Sbjct: 1012 VKHVQNIILKENLRQ 1026


>ref|XP_003621740.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355496755|gb|AES77958.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 523

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/71 (59%), Positives = 53/71 (74%)
 Frame = +3

Query: 3   LPDKMCDLLSLEHIKILGCHKLASLPDRMSYLTNLKTLEISDCPLLVERCQRETGADWPK 182
           LPD +C+L SL+HI I  C  LASLP RMS L NL+TLEI++CPLL+E C+ +T A WPK
Sbjct: 449 LPDWICNLSSLQHITIKDCQNLASLPKRMSRLANLQTLEITECPLLLEECETQTSATWPK 508

Query: 183 ISKIQSRILKK 215
           I+ I   ILK+
Sbjct: 509 IAHIPIIILKR 519


>ref|XP_003626885.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
           gi|355520907|gb|AET01361.1| Cc-nbs-lrr resistance
           protein [Medicago truncatula]
          Length = 842

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = +3

Query: 3   LPDKMCDLLSLEHIKILGCHKLASLPDRMSYLTNLKTLEISDCPLLVERCQRETGADWPK 182
           LPD +C+L SL+HI I  C  LASLP RM +L  L+TLE+ DCPLL+E C+ +T A WPK
Sbjct: 741 LPDWICNLSSLQHITIEYCENLASLPGRMPHLAKLQTLEVIDCPLLLEECETQTSATWPK 800

Query: 183 ISKIQSRILK 212
           I+ I + ILK
Sbjct: 801 IAHIPNIILK 810


>ref|XP_003626903.1| NBS resistance protein [Medicago truncatula]
            gi|355520925|gb|AET01379.1| NBS resistance protein
            [Medicago truncatula]
          Length = 950

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 35/61 (57%), Positives = 46/61 (75%)
 Frame = +3

Query: 3    LPDKMCDLLSLEHIKILGCHKLASLPDRMSYLTNLKTLEISDCPLLVERCQRETGADWPK 182
            LPD +C+L SL+H+++  C  LASLP+ M  LTNL+T+EI  CP+LVE CQ +TG  WPK
Sbjct: 846  LPDWICNLSSLQHLRVYDCINLASLPEGMPRLTNLQTIEIIGCPILVEECQTQTGETWPK 905

Query: 183  I 185
            I
Sbjct: 906  I 906


Top