BLASTX nr result

ID: Glycyrrhiza24_contig00017082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017082
         (1635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540090.1| PREDICTED: zinc finger CCCH domain-containin...   500   e-139
ref|XP_003607452.1| Zinc finger CCCH domain-containing protein [...   477   e-132
gb|AFK43143.1| unknown [Medicago truncatula]                          475   e-131
ref|XP_003538992.1| PREDICTED: zinc finger CCCH domain-containin...   397   e-108
ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containin...   340   8e-91

>ref|XP_003540090.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Glycine max]
          Length = 374

 Score =  500 bits (1288), Expect = e-139
 Identities = 260/383 (67%), Positives = 284/383 (74%), Gaps = 1/383 (0%)
 Frame = +3

Query: 168  MREICRNFQRGSCQYGERCRYMHVLQQPRKSNVQGFGGQSTSHQQQNTNPXXXXXXXXXX 347
            MR+ICRNFQRGSCQYGERCRY+HV QQ RK NV GFGGQS+SHQQQNTNP          
Sbjct: 1    MRDICRNFQRGSCQYGERCRYLHV-QQQRKPNVNGFGGQSSSHQQQNTNPFGFGSGSGS- 58

Query: 348  XXXHQQQKTNPFGFGMQNSSQINGSPQSEFKTNQFKPFENKWNRPSSKPQSGTSRQSDNN 527
                QQQK NPFGFG  NSSQ+NG P SE K NQ+KPFENKWNR SSKPQ    +  +N 
Sbjct: 59   ---QQQQKGNPFGFGKHNSSQLNGGPHSENKPNQYKPFENKWNRQSSKPQQNGVKSENNP 115

Query: 528  SQPVNHKCTDPEICKRQIVEDFEQEKPLWILTCYGHCKGAPCDIVGDISYEELRAMAYED 707
             Q  +H CTDPE CKRQI  DFEQEKPLWILTCY HCKGAPCDIVGDISYEELRA AYED
Sbjct: 116  KQSEHHICTDPENCKRQIAVDFEQEKPLWILTCYSHCKGAPCDIVGDISYEELRASAYED 175

Query: 708  AKNGMSFQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSSPDIQKFQSSGDNANPFSLTT 887
            A  GMS QSIVEKERNILKSKLVEF+KLLSEPYK+P++SS   Q  QS G NANPFS T+
Sbjct: 176  ANRGMSLQSIVEKERNILKSKLVEFDKLLSEPYKIPISSSLGSQTPQSIGANANPFS-TS 234

Query: 888  QNNGPLSVSSFSQLGASLNVGFERPSSPLMNNLAQPTPFGSGGNFLTSNTTNLFGSGVSS 1067
            Q+NGPLSVSSFSQL   LN+GFERPS+PL N   +P  FGSGGN L SNT NL  +GV  
Sbjct: 235  QSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTPTKPGFFGSGGNSLASNTANLNSNGVFG 294

Query: 1068 AQSSRYSTPVELTLFPGXXXXXXXXXXXXXXXXXXXMVQTTSDVE-LNKSQVENVSGDVS 1244
             QS  YSTP++L +FPG                   M QTT DV+ L++SQVE VS D S
Sbjct: 295  VQSGPYSTPLDLKMFPG---STQETSTAFSNSGPTSMFQTTPDVQLLSQSQVEKVSVDPS 351

Query: 1245 IWLKEKWNPGEIPEEAPPDEFVR 1313
            IWLKEKWNPGEIPEEAPPD FVR
Sbjct: 352  IWLKEKWNPGEIPEEAPPDTFVR 374


>ref|XP_003607452.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355508507|gb|AES89649.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 393

 Score =  477 bits (1227), Expect = e-132
 Identities = 253/399 (63%), Positives = 277/399 (69%), Gaps = 18/399 (4%)
 Frame = +3

Query: 168  MREICRNFQRGSCQYGERCRYMHVLQQPRKSNVQGFGGQSTSHQQQNTNPXXXXXXXXXX 347
            MREIC++F RG C++G  CR +H  QQ R SN  GFGG     QQ NTNP          
Sbjct: 1    MREICQHFLRGRCRFGTTCRNIHQ-QQQRTSNNNGFGGGGGGGQQ-NTNPFGFGSTSTSA 58

Query: 348  XXXHQQQKTNPFGFGMQNSSQINGSPQSEFKTNQFKPFEN-KWNRPSSKPQSGTSRQSDN 524
               HQ  KTNPFGFG QN    NG+P+S+FK NQ +P EN KW+R SSKPQ+GT RQSDN
Sbjct: 59   SNNHQP-KTNPFGFGSQN----NGAPRSDFKPNQSQPLENNKWSRSSSKPQNGTPRQSDN 113

Query: 525  NSQPVNHKCTDPEICKRQIVEDFEQEKPLWILTCYGHCKGAPCDIVGDISYEELRAMAYE 704
            NSQ VNHKCTDPE CKRQIVEDF+QEKPLWILTCYGHCKGAPCDIVGDISYEELRA AYE
Sbjct: 114  NSQTVNHKCTDPEACKRQIVEDFQQEKPLWILTCYGHCKGAPCDIVGDISYEELRAAAYE 173

Query: 705  DAKNGMSFQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSS-----------------PD 833
            D K GMS   IVEKE+NIL+SKLVEF KLLSEPYKMPL SS                 P 
Sbjct: 174  DNKKGMSLPQIVEKEKNILQSKLVEFNKLLSEPYKMPLTSSLNIQNFQSNGANVNAFQPA 233

Query: 834  IQKFQSSGDNANPFSLTTQNNGPLSVSSFSQLGASLNVGFERPSSPLMNNLAQPTPFGSG 1013
             Q FQS+G NAN F   TQNNGPLSVSSFSQLGASLN GF RPS+PLM+   QP+  G G
Sbjct: 234  TQNFQSNGANANAFQPATQNNGPLSVSSFSQLGASLNPGFGRPSAPLMSTPVQPSSIGGG 293

Query: 1014 GNFLTSNTTNLFGSGVSSAQSSRYSTPVELTLFPGXXXXXXXXXXXXXXXXXXXMVQTTS 1193
            GNF T N+ NLFGSG+S  Q + + TPV LT FPG                   M QT  
Sbjct: 294  GNFFTPNSGNLFGSGISGGQVNPFPTPVGLTGFPGSTSQFQQPPFGFNNTSSTTMFQTAP 353

Query: 1194 DVELNKSQVENVSGDVSIWLKEKWNPGEIPEEAPPDEFV 1310
            DV+LN SQVENVS D SIWLKEKWNPGEIPE+APPD FV
Sbjct: 354  DVQLNTSQVENVSVDDSIWLKEKWNPGEIPEQAPPDRFV 392


>gb|AFK43143.1| unknown [Medicago truncatula]
          Length = 393

 Score =  475 bits (1222), Expect = e-131
 Identities = 252/399 (63%), Positives = 277/399 (69%), Gaps = 18/399 (4%)
 Frame = +3

Query: 168  MREICRNFQRGSCQYGERCRYMHVLQQPRKSNVQGFGGQSTSHQQQNTNPXXXXXXXXXX 347
            MREIC++F RG C++G  CR +H  QQ R SN  GFGG     QQ NTNP          
Sbjct: 1    MREICQHFLRGRCRFGTTCRNIHQ-QQQRTSNNNGFGGGGGGGQQ-NTNPFGFGSTSTSA 58

Query: 348  XXXHQQQKTNPFGFGMQNSSQINGSPQSEFKTNQFKPFEN-KWNRPSSKPQSGTSRQSDN 524
               HQ  KT+PFGFG QN    NG+P+S+FK NQ +P EN KW+R SSKPQ+GT RQSDN
Sbjct: 59   SNNHQP-KTDPFGFGSQN----NGAPRSDFKPNQSQPLENNKWSRSSSKPQNGTPRQSDN 113

Query: 525  NSQPVNHKCTDPEICKRQIVEDFEQEKPLWILTCYGHCKGAPCDIVGDISYEELRAMAYE 704
            NSQ VNHKCTDPE CKRQIVEDF+QEKPLWILTCYGHCKGAPCDIVGDISYEELRA AYE
Sbjct: 114  NSQTVNHKCTDPEACKRQIVEDFQQEKPLWILTCYGHCKGAPCDIVGDISYEELRAAAYE 173

Query: 705  DAKNGMSFQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSS-----------------PD 833
            D K GMS   IVEKE+NIL+SKLVEF KLLSEPYKMPL SS                 P 
Sbjct: 174  DNKKGMSLPQIVEKEKNILQSKLVEFNKLLSEPYKMPLTSSLNIQNFQSNGANVNAFQPA 233

Query: 834  IQKFQSSGDNANPFSLTTQNNGPLSVSSFSQLGASLNVGFERPSSPLMNNLAQPTPFGSG 1013
             Q FQS+G NAN F   TQNNGPLSVSSFSQLGASLN GF RPS+PLM+   QP+  G G
Sbjct: 234  TQNFQSNGANANAFQPATQNNGPLSVSSFSQLGASLNPGFGRPSAPLMSTPVQPSSIGGG 293

Query: 1014 GNFLTSNTTNLFGSGVSSAQSSRYSTPVELTLFPGXXXXXXXXXXXXXXXXXXXMVQTTS 1193
            GNF T N+ NLFGSG+S  Q + + TPV LT FPG                   M QT  
Sbjct: 294  GNFFTPNSGNLFGSGISGGQVNPFPTPVGLTGFPGSTSQFQQPPFGFNNTSSTTMFQTAP 353

Query: 1194 DVELNKSQVENVSGDVSIWLKEKWNPGEIPEEAPPDEFV 1310
            DV+LN SQVENVS D SIWLKEKWNPGEIPE+APPD FV
Sbjct: 354  DVQLNTSQVENVSVDDSIWLKEKWNPGEIPEQAPPDRFV 392


>ref|XP_003538992.1| PREDICTED: zinc finger CCCH domain-containing protein 46-like
            [Glycine max]
          Length = 279

 Score =  397 bits (1021), Expect = e-108
 Identities = 203/285 (71%), Positives = 225/285 (78%), Gaps = 2/285 (0%)
 Frame = +3

Query: 168  MREICRNFQRGSCQYGERCRYMHVLQQPRKSNVQGFGGQSTSHQQQNTNPXXXXXXXXXX 347
            MR+ICRNFQRGSCQYGERCRY+HV QQ RK NV GFGGQS+S+QQQNTNP          
Sbjct: 1    MRDICRNFQRGSCQYGERCRYLHV-QQQRKPNVNGFGGQSSSYQQQNTNPFGFGSGSQQ- 58

Query: 348  XXXHQQQKTNPFGFGMQNSSQINGSPQSEFKTNQFKPFENKWNRPSSKPQSGTSRQSDNN 527
                QQQK NPFGFG QNSSQ+NG P SE K NQ+KPFENKWNR SSKPQ    + S+NN
Sbjct: 59   ---QQQQKGNPFGFGKQNSSQLNGGPHSEHKPNQYKPFENKWNRQSSKPQQNGVK-SENN 114

Query: 528  SQPVNHKCTDPEICKRQIVEDFEQEKPLWILTCYGHCKGAPCDIVGDISYEELRAMAYED 707
            S+  +H CTDPE CKRQI  DFEQEKPLWILTCY HCKGAPCDIVGDISYEELRA AYED
Sbjct: 115  SKQTDHICTDPENCKRQIAVDFEQEKPLWILTCYSHCKGAPCDIVGDISYEELRASAYED 174

Query: 708  AKNGMSFQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSSPDIQKFQS--SGDNANPFSL 881
            AK GM+ QSIVEKERNIL SKLVEF+KLLSEPY++P++SS      QS  +  NANPFS 
Sbjct: 175  AKRGMNLQSIVEKERNILNSKLVEFQKLLSEPYQIPISSSLGSPTPQSIVANANANPFS- 233

Query: 882  TTQNNGPLSVSSFSQLGASLNVGFERPSSPLMNNLAQPTPFGSGG 1016
            T+Q+NGPLSVSSFSQL   LN+GFERPS+PL N L +P  FGSGG
Sbjct: 234  TSQSNGPLSVSSFSQLSTPLNMGFERPSAPLTNTLTKPGFFGSGG 278


>ref|XP_002274515.2| PREDICTED: zinc finger CCCH domain-containing protein 16-like [Vitis
            vinifera]
          Length = 383

 Score =  340 bits (871), Expect = 8e-91
 Identities = 201/413 (48%), Positives = 236/413 (57%), Gaps = 33/413 (7%)
 Frame = +3

Query: 171  REICRNFQRGSCQYGERCRYMHVLQQPRKSNVQGFGGQSTSHQQQNTNPXXXXXXXXXXX 350
            +E CRNFQRGSCQYGERC+++HV QQ  K NV GFG Q TS   Q+TN            
Sbjct: 5    KEPCRNFQRGSCQYGERCKFLHVTQQQPKPNVSGFGAQ-TSSNFQHTNV----------- 52

Query: 351  XXHQQQKTNPFGFGMQNSSQINGSPQSEFKTNQFKPFENKWNRPS---SKPQSGTSRQSD 521
               QQQ++NPFGFG+Q++S               KPFENKW R S   +   S +SRQSD
Sbjct: 53   ---QQQRSNPFGFGVQSNSLP-------------KPFENKWTRFSPLTTGSSSSSSRQSD 96

Query: 522  NNSQPVNHKCTDPEICKRQIVEDFEQEKPLWILTCYGHCKGAPCDIVGDISYEELRAMAY 701
            N  QP NHKCTDPE CKRQIVEDFE E+P+W LTCYGHCK APCDIVGDISYEELR  AY
Sbjct: 97   NQVQPANHKCTDPESCKRQIVEDFEHERPIWKLTCYGHCKSAPCDIVGDISYEELRLAAY 156

Query: 702  EDAKNGMSFQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSSPDIQKFQSSGDNANPFSL 881
            +DA  G+S QSIVE+ER++L SKL+EF+ LL +PY  P NS+  I   QS   N +  SL
Sbjct: 157  DDAGRGLSLQSIVERERSLLNSKLIEFDSLLRKPYAAPPNSTLAI---QSPAPNPDASSL 213

Query: 882  TTQNNGPLSVSSFSQLGASLNVGF-ERPSSPLMNNLAQPT-----------------PFG 1007
            T QNN P S SSFSQL  S N+GF  RPS+P  N   Q                    FG
Sbjct: 214  TAQNNTPPSASSFSQLSTSPNMGFGTRPSTPSNNAFGQSNSIQFSSQTSGAFGTNNLAFG 273

Query: 1008 SGGNF------------LTSNTTNLFGSGVSSAQSSRYSTPVELTLFPGXXXXXXXXXXX 1151
            + G+F            L SNT   F     SA S  +S P                   
Sbjct: 274  NAGSFGSQLPVQMHGSPLPSNTAG-FSHNNMSAGSKAFSPPAASPQI--ISFANNQSPIL 330

Query: 1152 XXXXXXXXMVQTTSDVELNKSQVENVSGDVSIWLKEKWNPGEIPEEAPPDEFV 1310
                      ++T   +L K Q +N SGD+SIWLKE+WNPGEIPEE PPD FV
Sbjct: 331  SSGTNSMFSAESTMHAQLEKMQRDNFSGDMSIWLKEEWNPGEIPEEEPPDAFV 383


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