BLASTX nr result

ID: Glycyrrhiza24_contig00017076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017076
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328453.1| predicted protein [Populus trichocarpa] gi|2...    84   5e-14
ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago...    82   2e-13
ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus tric...    80   7e-13
gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago trunc...    78   3e-12
ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago tru...    78   3e-12

>ref|XP_002328453.1| predicted protein [Populus trichocarpa] gi|222838168|gb|EEE76533.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 66/189 (34%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
 Frame = +3

Query: 3   LDVSSCPRLRSLPVLPFMLQDLNASNCISLETVSNFGIAMLQDSFDRLKKRALVRQIQEE 182
           LD+  C RL+ LP LP  LQ L AS CISL ++++  I                   Q E
Sbjct: 5   LDLHGCERLQHLPELPSSLQVLMASYCISLRSLASIFI-------------------QGE 45

Query: 183 EQMSIRHGDYLGRYEFSNCIKLDQIACKTIMEEALIRIQLAAYLSSTIDEFYDVSKNFDP 362
           ++ +        ++ FSNC+KLDQ AC  IME+A +RI+  A            S  F+ 
Sbjct: 46  KEYAAASQ----QFNFSNCLKLDQNACTRIMEDAHLRIRRMA------------SSLFNR 89

Query: 363 EDFVYISRPIYV--ILPGSEVPDWFVHKRTDSSTITIKL-FKRWLEYCMHPGFAFCLVVG 533
           E   Y  +PI V   +PG EVP+WF +K T  S++ I   + R        GF FC VV 
Sbjct: 90  E---YFGKPIRVRLCIPGLEVPEWFCYKNTGGSSLNIPAHWHRTTNTDQFLGFTFCAVVS 146

Query: 534 PISHSDRKK 560
              HS +K+
Sbjct: 147 -FGHSKKKR 154


>ref|XP_003605840.1| NBS-LRR resistance-like protein 4G [Medicago truncatula]
            gi|355506895|gb|AES88037.1| NBS-LRR resistance-like
            protein 4G [Medicago truncatula]
          Length = 1264

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 16/289 (5%)
 Frame = +3

Query: 3    LDVSSCPRLRSLPVLPFMLQDLNASNCISLETVSNFGIAMLQDSFDRLKKRALVRQIQEE 182
            LD+  C  ++ LP LP  ++ L+ +NC SLETV                    + ++ +E
Sbjct: 846  LDLCKCMSIQYLPELPPSIEVLDVTNCTSLETVFTC---------------PAIDELLQE 890

Query: 183  EQMSIRHGDYLGRYEFSNCIKLDQIACKTIMEEALIRIQLAAY--LSSTID-EFYDVSKN 353
             ++ I          F NC++L++ +   IM +A +R++ AAY  +S+ I+    D    
Sbjct: 891  HKVFI---------SFKNCVELNEYSRNGIMLDAQVRLKEAAYVDVSAKIEGSESDPCFF 941

Query: 354  FDPEDFVYISRPIYVILPGSEVPDWFVHKRTDSSTITIKLFKRWLEYCMHPGFAFCLVVG 533
            F  E       P  VI PGS VPDWF H R+  ++ITI+L           GF FCL++ 
Sbjct: 942  FKSEATSSYHHPPTVICPGSRVPDWF-HYRSTEASITIELSVSHSPQSNIFGFIFCLIL- 999

Query: 534  PISHSDRKKIHHTGSGSMAGCRYYF--GDKYAGTCIIKSSCNY--DAESDQVLLWHDK-I 698
            P S  + K ++        GC  Y   G+    T    S C++     SD V LW+D+  
Sbjct: 1000 PQSLPNEKNLNW-----KIGCECYMEGGENIRNT----SMCSFATGLVSDHVYLWYDENF 1050

Query: 699  ETEIADGTSNVPPND----VVVEVSFKFFVTP----GLHVKQCGIRSLH 821
              ++ + T     ND       ++SF+FFV       + +K+CGI  ++
Sbjct: 1051 CFDMFNTTGKSRTNDDYSAYKPKLSFQFFVETEDKMNVVIKECGICQIY 1099


>ref|XP_002328445.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222838160|gb|EEE76525.1| tir-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1176

 Score = 80.1 bits (196), Expect = 7e-13
 Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
 Frame = +3

Query: 3    LDVSSCPRLRSLPVLPFMLQDLNASNCISLETVSNFGIAMLQDSFDRLKKRALVRQIQEE 182
            LD+  C RL+ LP LP  LQ L AS CISL ++++  I          K+ A   Q    
Sbjct: 945  LDLHGCERLQHLPELPSSLQVLMASYCISLRSLASIFI-------QGGKEYAAASQ---- 993

Query: 183  EQMSIRHGDYLGRYEFSNCIKLDQIACKTIMEEALIRIQLAAYLSSTIDEFYDVSKNFDP 362
                        ++ FSNC+KLDQ AC  IME+  +RI+  A            S  F+ 
Sbjct: 994  ------------QFNFSNCLKLDQNACNRIMEDVHLRIRRMA------------SSLFNR 1029

Query: 363  EDFVYISRPIYV--ILPGSEVPDWFVHKRTDSSTITIKL-FKRWLEYCMHPGFAFCLVVG 533
            E   Y  +PI V   +PG EVP+WF +K T  S++ I   + R        GF FC VV 
Sbjct: 1030 E---YFGKPIRVRLCIPGLEVPEWFCYKNTGGSSLNIPAHWHRTTNTDQFLGFTFCAVVS 1086

Query: 534  PISHSDRKKIH-------HTGSGSMAGCRYYFGDKYAGTCIIKSSCNYDAESDQVLLW 686
              +   ++ ++        T  G+ +   +Y  ++       K  C +  E D V +W
Sbjct: 1087 FGNSKKKRPVNIRCECHLITQGGNQSDLNFYCYEEVER----KERCLW--EGDHVFIW 1138


>gb|ABD28507.1| Leucine-rich repeat; Leucine-rich [Medicago truncatula]
          Length = 1006

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 17/278 (6%)
 Frame = +3

Query: 3    LDVSSCPRLRSLPVLPFMLQDLNASNCISLETVSNFGIAMLQDSFDRLKKRALVRQIQEE 182
            LDV  C RL+++P LP  L++L A++C SLETV         ++ D L+ +A        
Sbjct: 694  LDVKGCRRLQNMPELPPSLKELYATDCSSLETVM-----FNWNASDLLQLQA-------- 740

Query: 183  EQMSIRHGDYLGRYEFSNCIKLDQIACKTIMEEALIRIQLAAY--LSSTIDEFYDVSKNF 356
                     Y    +F NC+ LD+++ + I   A + ++  AY  LS+   +F D     
Sbjct: 741  ---------YKLHTQFQNCVNLDELSLRAIEVNAQVNMKKLAYNHLSTLGSKFLD----- 786

Query: 357  DPEDFVYISRPIYVILPGSEVPDWFVHKRTDSSTITIKLFKRWLEYCMHPGFAFCLVVGP 536
                      P+ VI PGS+VP+W +++ T++S +T+             GF FC+V G 
Sbjct: 787  ---------GPVDVIYPGSKVPEWLMYRTTEAS-VTVDFSS--APKSKFVGFIFCVVAGQ 834

Query: 537  ISHSDRKKIH-----HTGSGSMAGCRYYFGDKYAGTCIIKSSCNYDAESDQVLLWHDKI- 698
            +   D+  I       TG+G     +   G     T I  S    +  SD + +W+D++ 
Sbjct: 835  LPSDDKNFIGCDCYLETGNGE----KVSLGSMDTWTSIHSS----EFFSDHIFMWYDELC 886

Query: 699  -------ETEIADG--TSNVPPNDVVVEVSFKFFVTPG 785
                   E E  D    S +P      +VSF+FF   G
Sbjct: 887  CLQNSKPEKENMDELMASYIP------KVSFEFFAQSG 918


>ref|XP_003597591.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355486639|gb|AES67842.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1169

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 77/278 (27%), Positives = 123/278 (44%), Gaps = 17/278 (6%)
 Frame = +3

Query: 3    LDVSSCPRLRSLPVLPFMLQDLNASNCISLETVSNFGIAMLQDSFDRLKKRALVRQIQEE 182
            LDV  C RL+++P LP  L++L A++C SLETV         ++ D L+ +A        
Sbjct: 857  LDVKGCRRLQNMPELPPSLKELYATDCSSLETVM-----FNWNASDLLQLQA-------- 903

Query: 183  EQMSIRHGDYLGRYEFSNCIKLDQIACKTIMEEALIRIQLAAY--LSSTIDEFYDVSKNF 356
                     Y    +F NC+ LD+++ + I   A + ++  AY  LS+   +F D     
Sbjct: 904  ---------YKLHTQFQNCVNLDELSLRAIEVNAQVNMKKLAYNHLSTLGSKFLD----- 949

Query: 357  DPEDFVYISRPIYVILPGSEVPDWFVHKRTDSSTITIKLFKRWLEYCMHPGFAFCLVVGP 536
                      P+ VI PGS+VP+W +++ T++S +T+             GF FC+V G 
Sbjct: 950  ---------GPVDVIYPGSKVPEWLMYRTTEAS-VTVDFSS--APKSKFVGFIFCVVAGQ 997

Query: 537  ISHSDRKKIH-----HTGSGSMAGCRYYFGDKYAGTCIIKSSCNYDAESDQVLLWHDKI- 698
            +   D+  I       TG+G     +   G     T I  S    +  SD + +W+D++ 
Sbjct: 998  LPSDDKNFIGCDCYLETGNGE----KVSLGSMDTWTSIHSS----EFFSDHIFMWYDELC 1049

Query: 699  -------ETEIADG--TSNVPPNDVVVEVSFKFFVTPG 785
                   E E  D    S +P      +VSF+FF   G
Sbjct: 1050 CLQNSKPEKENMDELMASYIP------KVSFEFFAQSG 1081


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