BLASTX nr result

ID: Glycyrrhiza24_contig00017016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017016
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU18217.1| unknown [Glycine max]                                  260   7e-68
ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_002532367.1| ring finger protein, putative [Ricinus commu...   198   4e-49
ref|XP_003520597.1| PREDICTED: RING-H2 finger protein ATL1-like ...   179   2e-43
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   174   7e-42

>gb|ACU18217.1| unknown [Glycine max]
          Length = 264

 Score =  260 bits (665), Expect = 7e-68
 Identities = 123/154 (79%), Positives = 132/154 (85%), Gaps = 1/154 (0%)
 Frame = -3

Query: 460 KLGYQALPPIIAQASTLHHPPQPVS-DYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSN 284
           KLGY+A PPI  QA TL HPPQP S DYAFPI  IVV+SILATVLLLLSYFTFLTK CSN
Sbjct: 12  KLGYEAFPPIKTQAGTLQHPPQPASSDYAFPILVIVVLSILATVLLLLSYFTFLTKYCSN 71

Query: 283 WHQFNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGDQSVYG 104
           W Q NP+RWISILRARHDEDPFIA SP+ WNRGLD+S+IREIPTF+FI+ EG      YG
Sbjct: 72  WRQVNPMRWISILRARHDEDPFIAFSPTMWNRGLDDSIIREIPTFKFIKEEGEDQSVYYG 131

Query: 103 CVVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQ 2
           CVVCLTEF+E DVLKVLPNCNHAFHLDCIDIWLQ
Sbjct: 132 CVVCLTEFKEHDVLKVLPNCNHAFHLDCIDIWLQ 165


>ref|XP_002300781.1| predicted protein [Populus trichocarpa] gi|222842507|gb|EEE80054.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  204 bits (518), Expect = 8e-51
 Identities = 92/141 (65%), Positives = 113/141 (80%)
 Frame = -3

Query: 424 QASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSNWHQFNPLRWISIL 245
           Q + ++  P P SD+AFP+ AI V+SI+ T  LL+ Y+ F+ KCCSNW+QFN LRW ++ 
Sbjct: 16  QQNLIYQQPSPTSDHAFPLLAIAVLSIMGTAFLLVGYYVFVNKCCSNWNQFNLLRWFTVW 75

Query: 244 RARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGDQSVYGCVVCLTEFQEQDV 65
           RAR +ED FIALSP+ WNRGLDESVIREIPTFQ+ R E G ++S  GCVVCL EFQEQD+
Sbjct: 76  RARRNEDSFIALSPTMWNRGLDESVIREIPTFQY-RREEGRERSSCGCVVCLNEFQEQDM 134

Query: 64  LKVLPNCNHAFHLDCIDIWLQ 2
           L+VLPNC+HAFHLDCIDIW Q
Sbjct: 135 LRVLPNCSHAFHLDCIDIWFQ 155


>ref|XP_002532367.1| ring finger protein, putative [Ricinus communis]
           gi|223527923|gb|EEF30010.1| ring finger protein,
           putative [Ricinus communis]
          Length = 345

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/152 (61%), Positives = 111/152 (73%)
 Frame = -3

Query: 457 LGYQALPPIIAQASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSNWH 278
           L   ALP    Q    +  P P SD+AFPI AI ++SI+AT +LL  Y+ F+ KCC NW 
Sbjct: 11  LELHALPFKTQQNPIYNQSPSPTSDHAFPILAIALLSIMATAILLFGYYVFVNKCCFNWQ 70

Query: 277 QFNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGGGDQSVYGCV 98
           Q N LRW+S    R +ED FIALSP+ WNRGLDESVIR IP FQ+ RGE    +S+YGCV
Sbjct: 71  QVNLLRWVSTWLVRRNEDSFIALSPTMWNRGLDESVIRGIPAFQYRRGE-AQQRSIYGCV 129

Query: 97  VCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQ 2
           VCL EFQE+D+L+VLPNCNH+FHLDCIDIWLQ
Sbjct: 130 VCLNEFQEEDMLRVLPNCNHSFHLDCIDIWLQ 161


>ref|XP_003520597.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 335

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/145 (62%), Positives = 104/145 (71%), Gaps = 8/145 (5%)
 Frame = -3

Query: 412 LHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSNWHQFNPLRWISILRARH 233
           ++H  QP SD   PI AI+V SI  T  +L++Y T +TKCCSNWHQ NPLRWIS L+A  
Sbjct: 22  IYHTTQPASD--LPILAIIVPSIFVTAFILITYLTLVTKCCSNWHQLNPLRWISTLQASQ 79

Query: 232 DE-----DPFIALS--PSTWNRGLDESVIREIPTFQFIRGEGGGD-QSVYGCVVCLTEFQ 77
            E     DPFIALS  P  WN GLDES I+EIPT +  + E   + QSV GCVVCLTEFQ
Sbjct: 80  HEHQDHQDPFIALSLSPMMWNHGLDESAIKEIPTLECTKAEAEKNIQSVCGCVVCLTEFQ 139

Query: 76  EQDVLKVLPNCNHAFHLDCIDIWLQ 2
           E D+LKVLPNC+HAFHL CIDIWLQ
Sbjct: 140 EHDMLKVLPNCSHAFHLHCIDIWLQ 164


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/153 (54%), Positives = 108/153 (70%), Gaps = 2/153 (1%)
 Frame = -3

Query: 454 GYQALPPIIAQASTLHHPPQPVSDYAFPIFAIVVVSILATVLLLLSYFTFLTKCCSNWHQ 275
           G QA  PI +QAS++   P   SD +FPI AI V+ ILAT  LL+SY+ F+ KCC NWH+
Sbjct: 19  GSQAFSPIKSQASSVLPSPSHSSDTSFPIIAIAVIGILATAFLLVSYYIFVIKCCLNWHR 78

Query: 274 FNPLRWISILRARHDEDPFIALSPSTWNRGLDESVIREIPTFQFIRGEGG--GDQSVYGC 101
            + LR  S  R+RH EDP +  SP+  +RGLDESVIR IP FQF +G G   G++S   C
Sbjct: 79  IDLLRRFSFSRSRHPEDPLMVYSPAIESRGLDESVIRSIPIFQFRKGGGREFGERSHCEC 138

Query: 100 VVCLTEFQEQDVLKVLPNCNHAFHLDCIDIWLQ 2
            VCL EFQE++ L+++PNC+H FH+DCID+WLQ
Sbjct: 139 AVCLNEFQEEEKLRIIPNCSHIFHIDCIDVWLQ 171


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