BLASTX nr result

ID: Glycyrrhiza24_contig00017006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017006
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38905.1| unknown [Medicago truncatula]                          163   2e-38
ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-...   162   6e-38
ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycin...   159   4e-37
gb|AFK35597.1| unknown [Lotus japonicus]                              152   5e-35
ref|XP_002305996.1| high mobility group family [Populus trichoca...   146   3e-33

>gb|AFK38905.1| unknown [Medicago truncatula]
          Length = 152

 Score =  163 bits (413), Expect = 2e-38
 Identities = 90/139 (64%), Positives = 95/139 (68%)
 Frame = -2

Query: 614 MAKKAKGSEKTPXXXXXXXXXXXXSGKLVLRIKSNEGLKRSVXXXXXXXXXXXXXXXXXX 435
           MAKKAK S                 GKLVL IKSNEG+KRS+                  
Sbjct: 1   MAKKAKASNSLKNASSSSASTS---GKLVLAIKSNEGMKRSLRQTKSRDITKAVQKKNKQ 57

Query: 434 KIDAXXXXXXPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDI 255
           KIDA      PTAFFYFLEDFRKEF++QNPDVKSMRDIGKACGEKWKTMT+EEKVQYYDI
Sbjct: 58  KIDAKKPKKPPTAFFYFLEDFRKEFKDQNPDVKSMRDIGKACGEKWKTMTFEEKVQYYDI 117

Query: 254 ATEKRAEFDRATAEYNKKM 198
           ATEKRAEFDRAT EYNKKM
Sbjct: 118 ATEKRAEFDRATTEYNKKM 136


>ref|XP_003531090.1| PREDICTED: high mobility group B protein 14-like [Glycine max]
          Length = 148

 Score =  162 bits (409), Expect = 6e-38
 Identities = 89/139 (64%), Positives = 92/139 (66%)
 Frame = -2

Query: 614 MAKKAKGSEKTPXXXXXXXXXXXXSGKLVLRIKSNEGLKRSVXXXXXXXXXXXXXXXXXX 435
           MAKKAKGS                  KLVLRIKSNEG+KRSV                  
Sbjct: 1   MAKKAKGSHSASSASASSR-------KLVLRIKSNEGIKRSVRQTNSRKKPKAKQKKNKQ 53

Query: 434 KIDAXXXXXXPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDI 255
             DA      PTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDI
Sbjct: 54  MFDAMKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDI 113

Query: 254 ATEKRAEFDRATAEYNKKM 198
           AT+KR EFD A AE+NKKM
Sbjct: 114 ATKKREEFDNAMAEFNKKM 132


>ref|NP_001237839.1| uncharacterized protein LOC100305607 [Glycine max]
           gi|255626057|gb|ACU13373.1| unknown [Glycine max]
          Length = 150

 Score =  159 bits (402), Expect = 4e-37
 Identities = 89/139 (64%), Positives = 92/139 (66%)
 Frame = -2

Query: 614 MAKKAKGSEKTPXXXXXXXXXXXXSGKLVLRIKSNEGLKRSVXXXXXXXXXXXXXXXXXX 435
           MAKKAKGS                  KLVLRIKSNEG KRSV                  
Sbjct: 1   MAKKAKGSHSASSASASSSSD-----KLVLRIKSNEGTKRSVRQTNSRKKLKAKQKKNKQ 55

Query: 434 KIDAXXXXXXPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDI 255
           K DA      PTAFFYFLEDFRKEFQEQNPDV+SMRDIGKACGEKWKTMTYEEKVQYYDI
Sbjct: 56  KFDAMKPRKPPTAFFYFLEDFRKEFQEQNPDVRSMRDIGKACGEKWKTMTYEEKVQYYDI 115

Query: 254 ATEKRAEFDRATAEYNKKM 198
           AT+KR EFD A AE+NKKM
Sbjct: 116 ATKKREEFDSAMAEFNKKM 134


>gb|AFK35597.1| unknown [Lotus japonicus]
          Length = 162

 Score =  152 bits (384), Expect = 5e-35
 Identities = 78/113 (69%), Positives = 84/113 (74%)
 Frame = -2

Query: 536 KLVLRIKSNEGLKRSVXXXXXXXXXXXXXXXXXXKIDAXXXXXXPTAFFYFLEDFRKEFQ 357
           KLVLR+KS+E +KRS                   +IDA      PTAFFYFLEDFRKEFQ
Sbjct: 30  KLVLRVKSSEQMKRSAQQTKSTKKPKAKQKTSKQRIDANKPKKPPTAFFYFLEDFRKEFQ 89

Query: 356 EQNPDVKSMRDIGKACGEKWKTMTYEEKVQYYDIATEKRAEFDRATAEYNKKM 198
            QNPDVK+MRDIGK+CGEKWKTMTYEEKVQYYDIATEKRAEFDRA  EYNKKM
Sbjct: 90  VQNPDVKTMRDIGKSCGEKWKTMTYEEKVQYYDIATEKRAEFDRAMTEYNKKM 142


>ref|XP_002305996.1| high mobility group family [Populus trichocarpa]
           gi|222848960|gb|EEE86507.1| high mobility group family
           [Populus trichocarpa]
          Length = 165

 Score =  146 bits (369), Expect = 3e-33
 Identities = 81/148 (54%), Positives = 93/148 (62%), Gaps = 4/148 (2%)
 Frame = -2

Query: 632 LASTSHMAKKAKGSEKTPXXXXXXXXXXXXSGKLVLRIKSNEGLKRSVXXXXXXXXXXXX 453
           +A  +  +KK + S  +              GK+VLRI+SNE  KRS             
Sbjct: 1   MAKKASKSKKCRSSSSSSLASSTSSKRVSKEGKMVLRIRSNEITKRSTRQQRVVRSENER 60

Query: 452 XXXXXXK----IDAXXXXXXPTAFFYFLEDFRKEFQEQNPDVKSMRDIGKACGEKWKTMT 285
                 K     DA      PTAFFYFLEDFRKEFQEQNPDVKSMR++GKACGEKWKTMT
Sbjct: 61  RPKSKTKKNKKFDAKKPKKPPTAFFYFLEDFRKEFQEQNPDVKSMREVGKACGEKWKTMT 120

Query: 284 YEEKVQYYDIATEKRAEFDRATAEYNKK 201
           YEEKV+YYDIATEKRAEFDRAT+EY K+
Sbjct: 121 YEEKVKYYDIATEKRAEFDRATSEYIKR 148


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