BLASTX nr result

ID: Glycyrrhiza24_contig00017000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00017000
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago trun...   358   3e-97
ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago...   358   3e-97
ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like...   333   1e-89
ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vit...   254   7e-66
ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like...   231   1e-58

>gb|ABN08837.1| Helix-hairpin-helix motif, class 2 [Medicago truncatula]
          Length = 547

 Score =  358 bits (920), Expect = 3e-97
 Identities = 164/207 (79%), Positives = 189/207 (91%)
 Frame = +3

Query: 3   DCFFCGMNRKHKEQKRLENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPRIS 182
           DC  C MNRKHKEQK++ENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGP+IS
Sbjct: 251 DCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPQIS 310

Query: 183 WERPNIEMVIDFLNFHQNWDPSYIRRMVFPMMSTIFLRDVATTTVESLLFGQYEFDSLER 362
           WERPN+++++DFLNFHQNWDPSYIRR++FPMMSTIFLR++ATT  +SLLFGQ+EF SL+R
Sbjct: 311 WERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMATTPTDSLLFGQFEFASLKR 370

Query: 363 VKVRYGYQFYVVKWKRAVGNIAFKTPSNKSGTRQDDVIDEPDETVDLLDDCDAPEIHEDD 542
           VK RYGYQFYVVKWKRA+GNIA KTP+NKSG ++D +  + DETVDLLDDCD P+I E+D
Sbjct: 371 VKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLLDDCDFPQICEED 430

Query: 543 GCSFLLTDENMDLVGAAFPAEVERVWQ 623
           GCSFLLTDENMDLVGAA+P EV+R  Q
Sbjct: 431 GCSFLLTDENMDLVGAAYPEEVKRFRQ 457


>ref|XP_003623847.1| Flap endonuclease GEN-like protein [Medicago truncatula]
           gi|124360235|gb|ABN08248.1| Helix-hairpin-helix motif,
           class 2 [Medicago truncatula]
           gi|355498862|gb|AES80065.1| Flap endonuclease GEN-like
           protein [Medicago truncatula]
          Length = 612

 Score =  358 bits (920), Expect = 3e-97
 Identities = 164/207 (79%), Positives = 189/207 (91%)
 Frame = +3

Query: 3   DCFFCGMNRKHKEQKRLENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPRIS 182
           DC  C MNRKHKEQK++ENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGP+IS
Sbjct: 316 DCNSCCMNRKHKEQKKMENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPQIS 375

Query: 183 WERPNIEMVIDFLNFHQNWDPSYIRRMVFPMMSTIFLRDVATTTVESLLFGQYEFDSLER 362
           WERPN+++++DFLNFHQNWDPSYIRR++FPMMSTIFLR++ATT  +SLLFGQ+EF SL+R
Sbjct: 376 WERPNMDLLVDFLNFHQNWDPSYIRRIMFPMMSTIFLREMATTPTDSLLFGQFEFASLKR 435

Query: 363 VKVRYGYQFYVVKWKRAVGNIAFKTPSNKSGTRQDDVIDEPDETVDLLDDCDAPEIHEDD 542
           VK RYGYQFYVVKWKRA+GNIA KTP+NKSG ++D +  + DETVDLLDDCD P+I E+D
Sbjct: 436 VKTRYGYQFYVVKWKRAMGNIASKTPANKSGMQEDVIELDVDETVDLLDDCDFPQICEED 495

Query: 543 GCSFLLTDENMDLVGAAFPAEVERVWQ 623
           GCSFLLTDENMDLVGAA+P EV+R  Q
Sbjct: 496 GCSFLLTDENMDLVGAAYPEEVKRFRQ 522


>ref|XP_003534589.1| PREDICTED: flap endonuclease GEN-like 1-like [Glycine max]
          Length = 607

 Score =  333 bits (855), Expect = 1e-89
 Identities = 158/207 (76%), Positives = 178/207 (85%)
 Frame = +3

Query: 3   DCFFCGMNRKHKEQKRLENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPRIS 182
           DCF C MNRKHKE+KRLEN HT    KIA+EPNFPKDEIIDMYLCNDNGYFSA+D P I 
Sbjct: 315 DCFSCDMNRKHKEKKRLENQHTIFFHKIAEEPNFPKDEIIDMYLCNDNGYFSASDSPHIV 374

Query: 183 WERPNIEMVIDFLNFHQNWDPSYIRRMVFPMMSTIFLRDVATTTVESLLFGQYEFDSLER 362
           W  PNIEM+I+FLNFHQ+W+P+Y+RRM+FPM+STIFLRD+ TTTVE+ LFGQYEFDS+ER
Sbjct: 375 WGNPNIEMLINFLNFHQHWEPAYVRRMMFPMISTIFLRDMTTTTVETTLFGQYEFDSVER 434

Query: 363 VKVRYGYQFYVVKWKRAVGNIAFKTPSNKSGTRQDDVIDEPDETVDLLDDCDAPEIHEDD 542
           VK+RYGYQF+VVKWKRA  NI+ K P  +S  +QDD I E DE VDLLDD DAPEIH DD
Sbjct: 435 VKMRYGYQFFVVKWKRAGVNISCKVPLKESSVQQDDAI-ELDEMVDLLDDFDAPEIHGDD 493

Query: 543 GCSFLLTDENMDLVGAAFPAEVERVWQ 623
           GCSFLLTDENMDLVGAAFPAEV+R WQ
Sbjct: 494 GCSFLLTDENMDLVGAAFPAEVKRFWQ 520


>ref|XP_002273159.1| PREDICTED: flap endonuclease GEN-like 1 [Vitis vinifera]
           gi|296089141|emb|CBI38844.3| unnamed protein product
           [Vitis vinifera]
          Length = 667

 Score =  254 bits (650), Expect = 7e-66
 Identities = 115/207 (55%), Positives = 156/207 (75%), Gaps = 3/207 (1%)
 Frame = +3

Query: 3   DCFFCGMNRKHKEQKRLENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPRIS 182
           DC  C M+RK K QK+ ENW  ++C KIA E NFP +EII++YL N++G+F+  DGP IS
Sbjct: 372 DCSTCDMDRKEKAQKKQENWQLRVCKKIAMEQNFPNNEIIELYLSNNHGHFTEKDGPHIS 431

Query: 183 WERPNIEMVIDFLNFHQNWDPSYIRRMVFPMMSTIFLRDVATTTVESLLFGQYEFDSLER 362
           WE P  E+++DFL +HQ+W+PSYIR+ + PM+STIF R+ A     +LL+GQYEFDS++R
Sbjct: 432 WESPKTEVLVDFLAYHQHWEPSYIRQRMLPMLSTIFFREKALNPTNTLLYGQYEFDSIQR 491

Query: 363 VKVRYGYQFYVVKWKRAV---GNIAFKTPSNKSGTRQDDVIDEPDETVDLLDDCDAPEIH 533
           VKVR+G+QF+VVKWK+AV    ++A+  P +     + + + E DE++DLLD+C+ P+IH
Sbjct: 492 VKVRFGHQFFVVKWKKAVHAMASVAYTIPGDSD--IEQEKLTEVDESIDLLDECNVPQIH 549

Query: 534 EDDGCSFLLTDENMDLVGAAFPAEVER 614
            DDGC FLLTDENMDLV AAFP EV R
Sbjct: 550 VDDGCWFLLTDENMDLVRAAFPEEVNR 576


>ref|XP_004144985.1| PREDICTED: flap endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449472478|ref|XP_004153607.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
           gi|449516535|ref|XP_004165302.1| PREDICTED: flap
           endonuclease GEN-like 1-like [Cucumis sativus]
          Length = 606

 Score =  231 bits (588), Expect = 1e-58
 Identities = 110/209 (52%), Positives = 151/209 (72%), Gaps = 2/209 (0%)
 Frame = +3

Query: 3   DCFFCGMNRKHKEQKRLENWHTKICDKIAKEPNFPKDEIIDMYLCNDNGYFSANDGPRIS 182
           +C  C M+R+ KE+K+ ENW  ++ +KIA EPNFP  E+I MY C+++ YFS +D   +S
Sbjct: 318 NCSSCNMDREEKEKKKQENWRLRVRNKIAMEPNFPSSELIQMYQCDNHSYFS-DDDLVLS 376

Query: 183 WERPNIEMVIDFLNFHQNWDPSYIRRMVFPMMSTIFLRDVATTTVESLLFGQYEFDSLER 362
           W  P  EM++DFL FH  W+PSYIR+ + PM+STIFLR++A    ++LL+GQYEFDS+ R
Sbjct: 377 WGSPRTEMLVDFLVFHLQWEPSYIRQRMLPMLSTIFLREMANNPTQTLLYGQYEFDSILR 436

Query: 363 VKVRYGYQFYVVKWKRAVGNIA--FKTPSNKSGTRQDDVIDEPDETVDLLDDCDAPEIHE 536
            K+RYG+ FYVVKWK+AV  I+  ++  S + GT  DD ID  DE V+L D+ D+P+IH 
Sbjct: 437 EKIRYGHSFYVVKWKKAVPAISSTYEDSSGEFGTGPDDAID-VDEAVNLTDESDSPKIHI 495

Query: 537 DDGCSFLLTDENMDLVGAAFPAEVERVWQ 623
            DGCSFLLTDENM+LV AA+P +  +  Q
Sbjct: 496 QDGCSFLLTDENMELVAAAYPEQAAKFLQ 524


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