BLASTX nr result

ID: Glycyrrhiza24_contig00016987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016987
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28581.1| Zinc finger, RING-type [Medicago truncatula]            93   3e-17
ref|XP_003624102.1| Ring finger protein [Medicago truncatula] gi...    93   3e-17
ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like...    83   3e-14
ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like...    81   1e-13
ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like...    79   3e-13

>gb|ABD28581.1| Zinc finger, RING-type [Medicago truncatula]
          Length = 179

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 60  NAAVGLDDNVINSYPRFQFSRDAATTVVGQNTTCSICLCEYKDSEMLRMM 209
           NA VGL+DN+INSYPRFQFSRD+AT V+GQNTTCSICLCEYKDSEMLRMM
Sbjct: 76  NAVVGLEDNMINSYPRFQFSRDSAT-VLGQNTTCSICLCEYKDSEMLRMM 124


>ref|XP_003624102.1| Ring finger protein [Medicago truncatula]
           gi|355499117|gb|AES80320.1| Ring finger protein
           [Medicago truncatula]
          Length = 298

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = +3

Query: 60  NAAVGLDDNVINSYPRFQFSRDAATTVVGQNTTCSICLCEYKDSEMLRMM 209
           NA VGL+DN+INSYPRFQFSRD+AT V+GQNTTCSICLCEYKDSEMLRMM
Sbjct: 76  NAVVGLEDNMINSYPRFQFSRDSAT-VLGQNTTCSICLCEYKDSEMLRMM 124


>ref|XP_003534530.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 184

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/69 (65%), Positives = 48/69 (69%)
 Frame = +3

Query: 3   LPRVIFVAXXXXXXXXXXXNAAVGLDDNVINSYPRFQFSRDAATTVVGQNTTCSICLCEY 182
           LPRVIFVA           + AVG D +VINSYPRFQF+RD A      NTTCSICLCEY
Sbjct: 65  LPRVIFVAEDEDEDG----SVAVGFDQSVINSYPRFQFNRDNARNNNIINTTCSICLCEY 120

Query: 183 KDSEMLRMM 209
           KDSEMLRMM
Sbjct: 121 KDSEMLRMM 129


>ref|XP_004133841.1| PREDICTED: RING-H2 finger protein ATL67-like [Cucumis sativus]
           gi|449480258|ref|XP_004155843.1| PREDICTED: RING-H2
           finger protein ATL67-like [Cucumis sativus]
          Length = 184

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/69 (57%), Positives = 46/69 (66%)
 Frame = +3

Query: 3   LPRVIFVAXXXXXXXXXXXNAAVGLDDNVINSYPRFQFSRDAATTVVGQNTTCSICLCEY 182
           LP++IFVA           N  VGLD  VINSYP+F FSRD   ++ G N  CSICLCEY
Sbjct: 64  LPQIIFVAEDDAAPDRDDDNGVVGLDQTVINSYPKFPFSRD--KSMAGANCVCSICLCEY 121

Query: 183 KDSEMLRMM 209
           KD+EMLRMM
Sbjct: 122 KDAEMLRMM 130


>ref|XP_003552426.1| PREDICTED: RING-H2 finger protein ATL68-like [Glycine max]
          Length = 179

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/70 (62%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = +3

Query: 3   LPRVIFVAXXXXXXXXXXXNAAVGLDDNVINSYPRFQFSRDA-ATTVVGQNTTCSICLCE 179
           LPRVIFVA              VGLD +VINSYPRFQF++D+ A  ++  NTTCSICLCE
Sbjct: 59  LPRVIFVAEDDDEDADACM--VVGLDQSVINSYPRFQFNKDSDARNII--NTTCSICLCE 114

Query: 180 YKDSEMLRMM 209
           YKDSEMLRMM
Sbjct: 115 YKDSEMLRMM 124


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