BLASTX nr result

ID: Glycyrrhiza24_contig00016919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016919
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycin...   349   9e-94
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...   349   1e-93
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   300   5e-79
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...   289   1e-75
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2...   286   7e-75

>ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
          Length = 394

 Score =  349 bits (896), Expect = 9e-94
 Identities = 185/287 (64%), Positives = 208/287 (72%), Gaps = 24/287 (8%)
 Frame = -2

Query: 952 TVQENSSNREGKMPEXXXXXXXXXXXXXSQENGDVVSTATKVYVGGIPYYSTEDDIRSYF 773
           T +EN SN  G+MPE              Q+NGD  +T TK+YVGGIPYYSTEDDIRSYF
Sbjct: 112 TAKENESNGGGEMPEATELTKTNTTTS--QDNGDAPNTNTKIYVGGIPYYSTEDDIRSYF 169

Query: 772 EGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQ 593
           E CGTITEVDCMTFPE+GKFRGIAII+FKTE            DMGGLFLKIQPYKA T+
Sbjct: 170 ESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQPYKA-TR 228

Query: 592 PFKAEARFAPEMMEGYNRIYVGNLSWDITEDEVRKFFSKCNITSIKFGMDKETGEFRGYA 413
             KA + FAPE++EGYNRIYVGNLSWDITE+E+RKFF+   ITS++FGMDKETGEFRGYA
Sbjct: 229 ANKA-SDFAPEILEGYNRIYVGNLSWDITEEELRKFFNNSEITSLRFGMDKETGEFRGYA 287

Query: 412 HVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLKKKPGEQPS----------------- 284
           HVDFGDSQSLK AL LDQ+VLFGRPVRISCAVPLKKK G   S                 
Sbjct: 288 HVDFGDSQSLKKALALDQNVLFGRPVRISCAVPLKKKTGTHASSTVNEANGDKSSSTGSD 347

Query: 283 -------EQPSPTVSGKMKRRICYECREKGHTLSACPNKKTVASTTT 164
                  ++ S T SGKM+RR CYEC EKGHT +ACP K+TVA+TTT
Sbjct: 348 KINGADGDKSSSTGSGKMRRRTCYECGEKGHTFAACPTKQTVAATTT 394


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score =  349 bits (895), Expect = 1e-93
 Identities = 187/287 (65%), Positives = 211/287 (73%), Gaps = 24/287 (8%)
 Frame = -2

Query: 952 TVQENSSNREGKMPEXXXXXXXXXXXXXSQENGDVVSTATKVYVGGIPYYSTEDDIRSYF 773
           T +EN SN  G+MPE              ++NGD   T TK YVGGIPYYSTEDDIRSYF
Sbjct: 130 TAEENESNGGGEMPEATELTKTNTTTS--KDNGDA-PTNTKAYVGGIPYYSTEDDIRSYF 186

Query: 772 EGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQ 593
           E CGTITEVDCMTFPE+GKFRGIAII+FKTE            DMGGLFLKIQPYKA T+
Sbjct: 187 ESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALDGADMGGLFLKIQPYKA-TR 245

Query: 592 PFKAEARFAPEMMEGYNRIYVGNLSWDITEDEVRKFFSKCNITSIKFGMDKETGEFRGYA 413
             KA + FAPE++EGYNRIYVGNLSWDITE+E+RKFF+ C ITS++FGMDKETGEFRGYA
Sbjct: 246 ANKA-SDFAPEILEGYNRIYVGNLSWDITEEELRKFFNGCEITSLRFGMDKETGEFRGYA 304

Query: 412 HVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLKKKP------------GEQPS----- 284
           HVDF DSQSLKTAL LDQ+VLFGRPVRISCAVPLKKK             G++PS     
Sbjct: 305 HVDFSDSQSLKTALALDQNVLFGRPVRISCAVPLKKKTGTHTSSTVNGANGDKPSSTGSD 364

Query: 283 -------EQPSPTVSGKMKRRICYECREKGHTLSACPNKKTVASTTT 164
                  ++PS T SGKM+RR CYEC EKGHT +ACP K+TVA+TTT
Sbjct: 365 RIDGADGDKPSSTGSGKMRRRTCYECGEKGHTFAACPKKQTVAATTT 411


>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  300 bits (769), Expect = 5e-79
 Identities = 156/239 (65%), Positives = 173/239 (72%), Gaps = 12/239 (5%)
 Frame = -2

Query: 865 QENGDVVSTATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFK 686
           QENGD    + KVYVGGIPYYSTEDDIRSYF+ CGTITEVDCM FPESGKFRGIAIISFK
Sbjct: 175 QENGDA---SNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFK 231

Query: 685 TEXXXXXXXXXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLSWDIT 506
           TE            DMGGLFLKIQPYK  T      + FAPEM+EGYNRIYVGNL WDIT
Sbjct: 232 TEAAAKRALALDGADMGGLFLKIQPYK--TTRANKSSDFAPEMVEGYNRIYVGNLPWDIT 289

Query: 505 EDEVRKFFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRIS 326
           EDEVRKFFS+CN++SI+FGMDKET EFRGYAHVDF D+ SL  AL LDQ ++ GRP +I 
Sbjct: 290 EDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKIR 349

Query: 325 CAVPLKKKPGEQPSEQPSPTV------------SGKMKRRICYECREKGHTLSACPNKK 185
           CAVP   K G +    P+P+             SGKMKRR CYEC E+GH  SACP K+
Sbjct: 350 CAVP---KKGAKDYSTPAPSSEKAENDGGLTSGSGKMKRRTCYECGERGHISSACPKKQ 405


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score =  289 bits (739), Expect = 1e-75
 Identities = 145/237 (61%), Positives = 174/237 (73%), Gaps = 12/237 (5%)
 Frame = -2

Query: 841 TATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXX 662
           +ATKVYVGGIPYYSTE+DIRSYFEGCGTITEVDCMTFP+SGKFRGIAII FKTE      
Sbjct: 179 SATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFKTEAAAKRA 238

Query: 661 XXXXXXDMGGLFLKIQPYKAPTQPFKAE--ARFAPEMMEGYNRIYVGNLSWDITEDEVRK 488
                 DMGG FLKIQPYK  T+ F+A+  + FAP+++EGYNRIYVGNLSWDITE+++RK
Sbjct: 239 LALDGSDMGGFFLKIQPYKT-TRTFQAKKVSDFAPKIVEGYNRIYVGNLSWDITEEDLRK 297

Query: 487 FFSKCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLK 308
           FFS C I+S+++G DKETGEFRGY HV+F D+ SL  AL LDQ ++ GR ++ISCAVP+K
Sbjct: 298 FFSGCKISSVRWGTDKETGEFRGYGHVEFSDNLSLLMALKLDQQIVCGRAIKISCAVPMK 357

Query: 307 ----------KKPGEQPSEQPSPTVSGKMKRRICYECREKGHTLSACPNKKTVASTT 167
                        G +       TVSGKM+RR CYEC +KGH  +ACP     A+ T
Sbjct: 358 GAKVHATAAPTATGNEADNGELSTVSGKMRRRTCYECHQKGHVSTACPKVLASAAAT 414


>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  286 bits (733), Expect = 7e-75
 Identities = 150/248 (60%), Positives = 171/248 (68%), Gaps = 25/248 (10%)
 Frame = -2

Query: 838 ATKVYVGGIPYYSTEDDIRSYFEGCGTITEVDCMTFPESGKFRGIAIISFKTEXXXXXXX 659
           A +VYVGGIPYYSTEDDIRS+FEGCGTITEVDCMTFP+SGKFRGIAIISFKTE       
Sbjct: 194 ADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAKRAL 253

Query: 658 XXXXXDMGGLFLKIQPYKAPTQPFKAEARFAPEMMEGYNRIYVGNLSWDITEDEVRKFFS 479
                DMGG +LKIQPYK  T     E  FAP ++EGYNRIYVGNLSWDITED+++KFFS
Sbjct: 254 DLDGSDMGGFYLKIQPYK--TTKVNKEPNFAPGIVEGYNRIYVGNLSWDITEDDLKKFFS 311

Query: 478 KCNITSIKFGMDKETGEFRGYAHVDFGDSQSLKTALTLDQSVLFGRPVRISCAVPLKKKP 299
            C I+SI+FGMDKETGEFRGY HVDF D+ SL  AL LDQ ++ GRP++ISCAVP  KK 
Sbjct: 312 DCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPIKISCAVP--KKG 369

Query: 298 GEQPSEQPS------------------------PTV-SGKMKRRICYECREKGHTLSACP 194
           G+    Q                          P++ SGK+KRR CYEC EKGH  +ACP
Sbjct: 370 GKLQENQNQIVEEAKIQSTAMPMITSDEVNNGVPSISSGKIKRRTCYECGEKGHISTACP 429

Query: 193 NKKTVAST 170
            K T   T
Sbjct: 430 KKLTADPT 437


Top