BLASTX nr result

ID: Glycyrrhiza24_contig00016837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016837
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34885.1| unknown [Medicago truncatula]                           78   9e-13
ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like do...    77   1e-12
ref|XP_003527102.1| PREDICTED: LRR repeats and ubiquitin-like do...    75   4e-12
ref|XP_002321465.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_003522997.1| PREDICTED: LRR repeats and ubiquitin-like do...    75   7e-12

>gb|AFK34885.1| unknown [Medicago truncatula]
          Length = 261

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 36/41 (87%), Positives = 41/41 (100%)
 Frame = -2

Query: 123 IRSFPDEVLDLDRSVRTLDLTHNRIVDIPVEISKLINVQRL 1
           +++FPDE++DLDRSVRTLDLTHNRIVDIPVEISKLINVQRL
Sbjct: 32  LKTFPDEIIDLDRSVRTLDLTHNRIVDIPVEISKLINVQRL 72


>ref|XP_003527101.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like isoform 1 [Glycine max]
          Length = 261

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 36/41 (87%), Positives = 41/41 (100%)
 Frame = -2

Query: 123 IRSFPDEVLDLDRSVRTLDLTHNRIVDIPVEISKLINVQRL 1
           +++FPDE+L+LDRSVRTLDLTHNRIVDIPVEISKLINVQRL
Sbjct: 32  LKTFPDEILELDRSVRTLDLTHNRIVDIPVEISKLINVQRL 72


>ref|XP_003527102.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like isoform 2 [Glycine max]
          Length = 263

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/39 (92%), Positives = 39/39 (100%)
 Frame = -2

Query: 117 SFPDEVLDLDRSVRTLDLTHNRIVDIPVEISKLINVQRL 1
           +FPDE+L+LDRSVRTLDLTHNRIVDIPVEISKLINVQRL
Sbjct: 36  TFPDEILELDRSVRTLDLTHNRIVDIPVEISKLINVQRL 74


>ref|XP_002321465.1| predicted protein [Populus trichocarpa] gi|222868461|gb|EEF05592.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 42/72 (58%), Positives = 52/72 (72%)
 Frame = -2

Query: 216 KSTGFVLIYDFVENAKKHEPFVRITLLYYRLIRSFPDEVLDLDRSVRTLDLTHNRIVDIP 37
           +STG V   D    A        IT +Y+  I +FPDEVLDLD++VRTLDLTHN++VDIP
Sbjct: 20  RSTGIVAFRDAKLKA--------ITYIYFIFI-AFPDEVLDLDKAVRTLDLTHNKLVDIP 70

Query: 36  VEISKLINVQRL 1
           +EISKLIN+QRL
Sbjct: 71  MEISKLINLQRL 82


>ref|XP_003522997.1| PREDICTED: LRR repeats and ubiquitin-like domain-containing protein
           At2g30105-like [Glycine max]
          Length = 261

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/41 (85%), Positives = 40/41 (97%)
 Frame = -2

Query: 123 IRSFPDEVLDLDRSVRTLDLTHNRIVDIPVEISKLINVQRL 1
           +++FPDE+L+LD SVRTLDLTHNRIVDIPVEISKLINVQRL
Sbjct: 32  LKTFPDEILELDTSVRTLDLTHNRIVDIPVEISKLINVQRL 72