BLASTX nr result
ID: Glycyrrhiza24_contig00016828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00016828
(1292 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula] g... 619 e-175
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s... 618 e-175
gb|ABD32640.1| WD40-like [Medicago truncatula] 615 e-174
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast... 535 e-149
ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondr... 535 e-149
>ref|XP_003589659.1| DNA gyrase subunit A [Medicago truncatula]
gi|355478707|gb|AES59910.1| DNA gyrase subunit A
[Medicago truncatula]
Length = 992
Score = 619 bits (1596), Expect = e-175
Identities = 314/343 (91%), Positives = 332/343 (96%)
Frame = -3
Query: 1290 LALSEKGYVKRMKPSTFNLQNRGTIGKSVGKLKVNDTMSDFLVCRAHDHVLYFSDKGTVY 1111
L LSEKGY+KRMKPSTFNLQ+RGTIGKSVGKLK+ND+MSDF+VCRAHD VLYFSDKGTVY
Sbjct: 650 LTLSEKGYLKRMKPSTFNLQHRGTIGKSVGKLKMNDSMSDFIVCRAHDFVLYFSDKGTVY 709
Query: 1110 SARAYKISECSRTAAGTPLVQILSLSDGERITSIIPVSEFSEDQFLLMLTMQGYIKRVPL 931
SARAYKI ECSRTA+GTPLVQILSLSDGERITSIIPVSEF++DQFLLMLTMQGYIKRVPL
Sbjct: 710 SARAYKIPECSRTASGTPLVQILSLSDGERITSIIPVSEFTDDQFLLMLTMQGYIKRVPL 769
Query: 930 NSFSSIRSTGIIAIQLVPGDELKWVRVCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 751
NSFSSIRS+GIIAIQLVPGDELKWVR CTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG
Sbjct: 770 NSFSSIRSSGIIAIQLVPGDELKWVRCCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 829
Query: 750 ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSNGKSQNGPWLLFVSESGYGKRVPLS 571
ALAMRL+EGDRMASVDIIPA MWNNLET+S+ P SNGKS +GPWLLF+SESG+GKRVPLS
Sbjct: 830 ALAMRLKEGDRMASVDIIPAAMWNNLETISKLPESNGKSYDGPWLLFISESGHGKRVPLS 889
Query: 570 SFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDI 391
FRMSSLNRVGLIGYKFSAEDRLAAVFVVGF+LAEDGESDEQVVLVSQSGTVNRIKVRDI
Sbjct: 890 RFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFTLAEDGESDEQVVLVSQSGTVNRIKVRDI 949
Query: 390 SIQSRFARGVRLMRLDHAGKIQSASLISATDCEPEEVLAIAQG 262
SIQSRFARGV LMRLDHAGKIQ+ASLISAT+CEPEE LAIAQG
Sbjct: 950 SIQSRFARGVILMRLDHAGKIQTASLISATECEPEEELAIAQG 992
Score = 60.8 bits (146), Expect = 7e-07
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 6/233 (2%)
Frame = -3
Query: 984 DQFLLMLTMQGYIKRVPLNSFSSIRSTGIIAI---QLVPGDELKWVRVCTNDDFVAMASH 814
++ LL L+ +GY+KR+ ++F +++ G I +L D + VC DFV S
Sbjct: 646 EEMLLTLSEKGYLKRMKPSTF-NLQHRGTIGKSVGKLKMNDSMSDFIVCRAHDFVLYFSD 704
Query: 813 NGMVILSLCSKIRTLGRNTRG---ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSN 643
G V + KI R G + L +G+R+ S IIP +SEF
Sbjct: 705 KGTVYSARAYKIPECSRTASGTPLVQILSLSDGERITS--IIP---------VSEF---- 749
Query: 642 GKSQNGPWLLFVSESGYGKRVPLSSFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAED 463
+ +LL ++ GY KRVPL+SF SS+ G+I + D L V
Sbjct: 750 ---TDDQFLLMLTMQGYIKRVPLNSF--SSIRSSGIIAIQLVPGDELKWVRCC------- 797
Query: 462 GESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVRLMRLDHAGKIQSASLISA 304
+D+ V + S +G V I R RG MRL ++ S +I A
Sbjct: 798 -TNDDFVAMASHNGMVILSLCSKIRTLGRNTRGALAMRLKEGDRMASVDIIPA 849
>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
chloroplastic/mitochondrial-like [Glycine max]
Length = 924
Score = 618 bits (1594), Expect = e-175
Identities = 316/343 (92%), Positives = 329/343 (95%)
Frame = -3
Query: 1290 LALSEKGYVKRMKPSTFNLQNRGTIGKSVGKLKVNDTMSDFLVCRAHDHVLYFSDKGTVY 1111
LALSEKGY+KRMKPSTFNLQNRGTIGKSVGKLKVND+MSDFLVC AHDHVLYFSDKGTVY
Sbjct: 582 LALSEKGYMKRMKPSTFNLQNRGTIGKSVGKLKVNDSMSDFLVCHAHDHVLYFSDKGTVY 641
Query: 1110 SARAYKISECSRTAAGTPLVQILSLSDGERITSIIPVSEFSEDQFLLMLTMQGYIKRVPL 931
SARAYKI ECSRTAAGTPLVQILSLSDGERITSIIPVSEF+EDQFLLMLTMQGYIKRV L
Sbjct: 642 SARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQGYIKRVSL 701
Query: 930 NSFSSIRSTGIIAIQLVPGDELKWVRVCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 751
N FSSIRS GIIAIQLVPGDELKWVR+C+NDDFVAMASHNGMV+LS CSKIRTL RNTRG
Sbjct: 702 NLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLSQCSKIRTLSRNTRG 761
Query: 750 ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSNGKSQNGPWLLFVSESGYGKRVPLS 571
A AMRL++GD+MASVDIIPA MWNNLET S+FPG N KSQNGPWLLFVSE+GYGKRVPLS
Sbjct: 762 APAMRLKKGDKMASVDIIPAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGYGKRVPLS 821
Query: 570 SFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDI 391
SFR+SSLNRVGLIGYKFSAEDRLAAVFVVGFS AEDGESDEQVVLVSQSGTVNRIKVRDI
Sbjct: 822 SFRISSLNRVGLIGYKFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQSGTVNRIKVRDI 881
Query: 390 SIQSRFARGVRLMRLDHAGKIQSASLISATDCEPEEVLAIAQG 262
SIQSRFARGV LMRLDH+GKIQSASLISATDCEPEEVLAIAQG
Sbjct: 882 SIQSRFARGVILMRLDHSGKIQSASLISATDCEPEEVLAIAQG 924
>gb|ABD32640.1| WD40-like [Medicago truncatula]
Length = 398
Score = 615 bits (1586), Expect = e-174
Identities = 312/343 (90%), Positives = 331/343 (96%)
Frame = -3
Query: 1290 LALSEKGYVKRMKPSTFNLQNRGTIGKSVGKLKVNDTMSDFLVCRAHDHVLYFSDKGTVY 1111
L LSEKGY+KRMKPSTFNLQ+RGTIGKSVGKLK+ND+MSDF+VCRAHD VLYFSDKGTVY
Sbjct: 56 LTLSEKGYLKRMKPSTFNLQHRGTIGKSVGKLKMNDSMSDFIVCRAHDFVLYFSDKGTVY 115
Query: 1110 SARAYKISECSRTAAGTPLVQILSLSDGERITSIIPVSEFSEDQFLLMLTMQGYIKRVPL 931
SARAYKI ECSRTA+GTPLVQILSLSDGERITSIIPVSEF++DQFLLMLTMQGYIKRVPL
Sbjct: 116 SARAYKIPECSRTASGTPLVQILSLSDGERITSIIPVSEFTDDQFLLMLTMQGYIKRVPL 175
Query: 930 NSFSSIRSTGIIAIQLVPGDELKWVRVCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 751
NSFSSIRS+GIIAIQLVPGDELKWVR CTNDDFVAMASHNGMVILSLC +IRTLGRNTRG
Sbjct: 176 NSFSSIRSSGIIAIQLVPGDELKWVRCCTNDDFVAMASHNGMVILSLCIQIRTLGRNTRG 235
Query: 750 ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSNGKSQNGPWLLFVSESGYGKRVPLS 571
ALAMRL+EGDRMASVDIIPA MWNNLET+S+ P SNGKS +GPWLLF+SESG+GKRVPLS
Sbjct: 236 ALAMRLKEGDRMASVDIIPAAMWNNLETISKLPESNGKSYDGPWLLFISESGHGKRVPLS 295
Query: 570 SFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDI 391
FRMSSLNRVGLIGYKFSAEDRLAAVFVVGF+LAEDGESDEQVVLVSQSGTVNRIKVRDI
Sbjct: 296 RFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFTLAEDGESDEQVVLVSQSGTVNRIKVRDI 355
Query: 390 SIQSRFARGVRLMRLDHAGKIQSASLISATDCEPEEVLAIAQG 262
SIQSRFARGV LMRLDHAGKIQ+ASLISAT+CEPEE LAIAQG
Sbjct: 356 SIQSRFARGVILMRLDHAGKIQTASLISATECEPEEELAIAQG 398
Score = 60.5 bits (145), Expect = 9e-07
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 6/233 (2%)
Frame = -3
Query: 984 DQFLLMLTMQGYIKRVPLNSFSSIRSTGIIAI---QLVPGDELKWVRVCTNDDFVAMASH 814
++ LL L+ +GY+KR+ ++F +++ G I +L D + VC DFV S
Sbjct: 52 EEMLLTLSEKGYLKRMKPSTF-NLQHRGTIGKSVGKLKMNDSMSDFIVCRAHDFVLYFSD 110
Query: 813 NGMVILSLCSKIRTLGRNTRG---ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSN 643
G V + KI R G + L +G+R+ S IIP +SEF
Sbjct: 111 KGTVYSARAYKIPECSRTASGTPLVQILSLSDGERITS--IIP---------VSEF---- 155
Query: 642 GKSQNGPWLLFVSESGYGKRVPLSSFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAED 463
+ +LL ++ GY KRVPL+SF SS+ G+I + D L V
Sbjct: 156 ---TDDQFLLMLTMQGYIKRVPLNSF--SSIRSSGIIAIQLVPGDELKWVRCC------- 203
Query: 462 GESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVRLMRLDHAGKIQSASLISA 304
+D+ V + S +G V I R RG MRL ++ S +I A
Sbjct: 204 -TNDDFVAMASHNGMVILSLCIQIRTLGRNTRGALAMRLKEGDRMASVDIIPA 255
>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
[Cucumis sativus]
Length = 923
Score = 535 bits (1378), Expect = e-149
Identities = 276/336 (82%), Positives = 298/336 (88%)
Frame = -3
Query: 1290 LALSEKGYVKRMKPSTFNLQNRGTIGKSVGKLKVNDTMSDFLVCRAHDHVLYFSDKGTVY 1111
LA SEKGYVKRMKP+TFNLQ+RGTIGKSVGKL+VND MSDF+VCRAHDHVLYFSDKG VY
Sbjct: 591 LAFSEKGYVKRMKPNTFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVY 650
Query: 1110 SARAYKISECSRTAAGTPLVQILSLSDGERITSIIPVSEFSEDQFLLMLTMQGYIKRVPL 931
SARAYKI EC RTAAGTPLVQ+LSLSDGERITSIIPVSEF DQFLLMLT GYIK+V L
Sbjct: 651 SARAYKIPECGRTAAGTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYGYIKKVSL 710
Query: 930 NSFSSIRSTGIIAIQLVPGDELKWVRVCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 751
N FSSIRSTGIIAIQLV GDELKWVR CTND+ VAMAS NGMVILS C IR LGRNTRG
Sbjct: 711 NFFSSIRSTGIIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRALGRNTRG 770
Query: 750 ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSNGKSQNGPWLLFVSESGYGKRVPLS 571
++AM+L+ GD+MAS+DIIPA +WN+LE ++ KS NGPWLLFVSESG GKRVPL
Sbjct: 771 SVAMKLKTGDKMASMDIIPAAVWNDLER------NSSKSSNGPWLLFVSESGVGKRVPLK 824
Query: 570 SFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDI 391
SFR+S L RVGLIG KFS++DRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRD+
Sbjct: 825 SFRLSPLRRVGLIGCKFSSQDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDV 884
Query: 390 SIQSRFARGVRLMRLDHAGKIQSASLISATDCEPEE 283
SIQSRFARGV LMRLDHAGKIQSASLISA + EPEE
Sbjct: 885 SIQSRFARGVILMRLDHAGKIQSASLISAAETEPEE 920
Score = 58.5 bits (140), Expect = 4e-06
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 6/233 (2%)
Frame = -3
Query: 984 DQFLLMLTMQGYIKRVPLNSFSSIRSTGIIAI---QLVPGDELKWVRVCTNDDFVAMASH 814
++ LL + +GY+KR+ N+F +++ G I +L D + VC D V S
Sbjct: 587 EEMLLAFSEKGYVKRMKPNTF-NLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSD 645
Query: 813 NGMVILSLCSKIRTLGRNTRG---ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSN 643
G+V + KI GR G + L +G+R+ S IIP +SEF G
Sbjct: 646 KGIVYSARAYKIPECGRTAAGTPLVQVLSLSDGERITS--IIP---------VSEFEGDQ 694
Query: 642 GKSQNGPWLLFVSESGYGKRVPLSSFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAED 463
+LL ++ GY K+V L+ F SS+ G+I + + D L V
Sbjct: 695 -------FLLMLTAYGYIKKVSLNFF--SSIRSTGIIAIQLVSGDELKWV--------RR 737
Query: 462 GESDEQVVLVSQSGTVNRIKVRDISIQSRFARGVRLMRLDHAGKIQSASLISA 304
+D V + SQ+G V I R RG M+L K+ S +I A
Sbjct: 738 CTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASMDIIPA 790
>ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative
[Ricinus communis] gi|223534351|gb|EEF36060.1| DNA gyrase
subunit A, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 433
Score = 535 bits (1377), Expect = e-149
Identities = 278/336 (82%), Positives = 299/336 (88%)
Frame = -3
Query: 1290 LALSEKGYVKRMKPSTFNLQNRGTIGKSVGKLKVNDTMSDFLVCRAHDHVLYFSDKGTVY 1111
LA SEKGYVKRMKP TFNLQNRGTIGKSVGKL+VND MSD +VCRAHDHVLYFSD G VY
Sbjct: 76 LAFSEKGYVKRMKPDTFNLQNRGTIGKSVGKLRVNDAMSDSIVCRAHDHVLYFSDLGIVY 135
Query: 1110 SARAYKISECSRTAAGTPLVQILSLSDGERITSIIPVSEFSEDQFLLMLTMQGYIKRVPL 931
SARAYKI ECSRTAAGTPLVQILSLSDGERITSIIPVSEFS DQFLLMLT+ GYIK+VPL
Sbjct: 136 SARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFSGDQFLLMLTVNGYIKKVPL 195
Query: 930 NSFSSIRSTGIIAIQLVPGDELKWVRVCTNDDFVAMASHNGMVILSLCSKIRTLGRNTRG 751
N FS+IRSTGIIAIQLVPGDELKWVR CTN+D VAMAS NGMVILS C IR L RNTRG
Sbjct: 196 NLFSAIRSTGIIAIQLVPGDELKWVRCCTNNDLVAMASLNGMVILSSCENIRALSRNTRG 255
Query: 750 ALAMRLREGDRMASVDIIPATMWNNLETLSEFPGSNGKSQNGPWLLFVSESGYGKRVPLS 571
+AMRL+ GD+MAS+DIIP M +LE + E P SN K +GPWLLFVSE+GYGKRVPLS
Sbjct: 256 GVAMRLKGGDKMASMDIIPVAMRKDLERVLEDPRSNSKG-SGPWLLFVSENGYGKRVPLS 314
Query: 570 SFRMSSLNRVGLIGYKFSAEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDI 391
SFR+S LNRVGLIGYKFSAED+LAAVFVVGF+LAEDGESDEQVVLVSQSGTVNRIKV+DI
Sbjct: 315 SFRLSPLNRVGLIGYKFSAEDQLAAVFVVGFTLAEDGESDEQVVLVSQSGTVNRIKVQDI 374
Query: 390 SIQSRFARGVRLMRLDHAGKIQSASLISATDCEPEE 283
SIQSRFARGV LMRL+ AGKIQSASLIS + EP+E
Sbjct: 375 SIQSRFARGVILMRLEQAGKIQSASLISTMEAEPKE 410