BLASTX nr result
ID: Glycyrrhiza24_contig00016805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00016805
(344 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ... 171 4e-41
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2... 148 4e-34
gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japo... 102 3e-20
ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group] g... 102 3e-20
gb|ABR16388.1| unknown [Picea sitchensis] 100 1e-19
>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498638|gb|AES79841.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 583
Score = 171 bits (434), Expect = 4e-41
Identities = 82/110 (74%), Positives = 98/110 (89%)
Frame = +2
Query: 14 DLGPDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEG 193
++G DVYSY+AVM+GLCKVGRSDEAMEL +EA+ +GL+P+VVTFN LI+GYSREGR MEG
Sbjct: 246 NIGVDVYSYSAVMNGLCKVGRSDEAMELFDEAVGVGLRPDVVTFNALIEGYSREGREMEG 305
Query: 194 VSVLKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFEV 343
V VLK+MK +HGCV D I+Y TVLHGLLKWNE +EA GVY+EMVR+GFEV
Sbjct: 306 VGVLKMMK-EHGCVADLINYKTVLHGLLKWNETVEAFGVYKEMVRIGFEV 354
Score = 60.5 bits (145), Expect = 1e-07
Identities = 38/104 (36%), Positives = 57/104 (54%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD + T +++ LCK G+ +AME+ GLK V +N L++G + GR E V +
Sbjct: 179 PDSATITVLINSLCKRGKVKKAMEVFEFLERKGLKLGVQAYNCLLRGLAYVGRVDEAVEI 238
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLG 334
L MK + V D SYS V++GL K EA+ ++ E V +G
Sbjct: 239 LMDMKTGNIGV-DVYSYSAVMNGLCKVGRSDEAMELFDEAVGVG 281
>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
predicted protein [Populus trichocarpa]
Length = 535
Score = 148 bits (374), Expect = 4e-34
Identities = 70/106 (66%), Positives = 86/106 (81%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD+Y+YTA+MDG CKVGRSDEAMELLNEA+EMGL PNVVTFNTL+ GY++EGRP++G V
Sbjct: 279 PDIYTYTAMMDGFCKVGRSDEAMELLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGFGV 338
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFE 340
LKLMK + C+PD ISYST+LHGLL W + + L ++ EM G E
Sbjct: 339 LKLMKQRK-CMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEGSGLE 383
>gb|EAZ26836.1| hypothetical protein OsJ_10752 [Oryza sativa Japonica Group]
Length = 523
Score = 102 bits (255), Expect = 3e-20
Identities = 47/106 (44%), Positives = 67/106 (63%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD+Y++T V+DG CKVGR+DEA + ++A+ GL P + T+N L+ G+ +EG P++ S+
Sbjct: 267 PDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSL 326
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFE 340
L M C PD IS+S VL LL+ E A Y+ M R GFE
Sbjct: 327 LMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFE 372
Score = 62.4 bits (150), Expect = 4e-08
Identities = 35/104 (33%), Positives = 55/104 (52%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
P V +++AV+ LCK GR AME+ + +G +P + T+N+LI G GR E + +
Sbjct: 196 PTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDL 255
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLG 334
L +K PD +++ VL G K EA ++ + VR G
Sbjct: 256 LNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNG 299
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/100 (31%), Positives = 50/100 (50%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD SY + LC+ G DEA E L+E + G +P V TF+ ++ + GR + V
Sbjct: 161 PDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEV 220
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREM 322
M+ GC P +Y++++ GL EAL + ++
Sbjct: 221 FDTMR-AVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKL 259
>ref|NP_001050037.1| Os03g0336000 [Oryza sativa Japonica Group]
gi|108708021|gb|ABF95816.1| expressed protein [Oryza
sativa Japonica Group] gi|113548508|dbj|BAF11951.1|
Os03g0336000 [Oryza sativa Japonica Group]
gi|125543773|gb|EAY89912.1| hypothetical protein
OsI_11461 [Oryza sativa Indica Group]
gi|215712300|dbj|BAG94427.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 545
Score = 102 bits (255), Expect = 3e-20
Identities = 47/106 (44%), Positives = 67/106 (63%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD+Y++T V+DG CKVGR+DEA + ++A+ GL P + T+N L+ G+ +EG P++ S+
Sbjct: 267 PDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNGLSPTIFTYNALLNGHCKEGNPLKAYSL 326
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFE 340
L M C PD IS+S VL LL+ E A Y+ M R GFE
Sbjct: 327 LMEMCGNAACPPDRISFSIVLQALLRAGETSAAWQAYKRMERAGFE 372
Score = 62.4 bits (150), Expect = 4e-08
Identities = 35/104 (33%), Positives = 55/104 (52%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
P V +++AV+ LCK GR AME+ + +G +P + T+N+LI G GR E + +
Sbjct: 196 PTVATFSAVVGCLCKRGRVTRAMEVFDTMRAVGCEPTIRTYNSLIGGLCYVGRLEEALDL 255
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLG 334
L +K PD +++ VL G K EA ++ + VR G
Sbjct: 256 LNKLKESPKQTPDIYTFTIVLDGFCKVGRTDEATPIFHDAVRNG 299
Score = 57.4 bits (137), Expect = 1e-06
Identities = 31/100 (31%), Positives = 50/100 (50%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PD SY + LC+ G DEA E L+E + G +P V TF+ ++ + GR + V
Sbjct: 161 PDAQSYATAVQCLCRKGAPDEAKEALDEMVARGFRPTVATFSAVVGCLCKRGRVTRAMEV 220
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREM 322
M+ GC P +Y++++ GL EAL + ++
Sbjct: 221 FDTMR-AVGCEPTIRTYNSLIGGLCYVGRLEEALDLLNKL 259
>gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 100 bits (249), Expect = 1e-19
Identities = 47/107 (43%), Positives = 75/107 (70%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
P++Y+YT + GLCK+ R D A E+ NEA+ GLKPN VT+NTL+ GY R R +E + +
Sbjct: 426 PNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDI 485
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFEV 343
LK M +++ C PD ++Y+T++ GL++ N+ +AL ++ EM G++V
Sbjct: 486 LKEM-HQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDV 531
Score = 65.1 bits (157), Expect = 6e-09
Identities = 36/106 (33%), Positives = 58/106 (54%)
Frame = +2
Query: 23 PDVYSYTAVMDGLCKVGRSDEAMELLNEAIEMGLKPNVVTFNTLIQGYSREGRPMEGVSV 202
PDV +YT V+ LCK ++A +L + E G +PN+ T+N LIQG RP E + +
Sbjct: 356 PDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALEL 415
Query: 203 LKLMKNKHGCVPDCISYSTVLHGLLKWNEGMEALGVYREMVRLGFE 340
+ LM+ + G P+ +Y+ + HGL K A ++ E + G +
Sbjct: 416 VTLME-QGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLK 460