BLASTX nr result

ID: Glycyrrhiza24_contig00016804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016804
         (1153 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [...   305   1e-80
ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis...   256   1e-65
ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arab...   243   9e-62
ref|XP_002510162.1| conserved hypothetical protein [Ricinus comm...   239   7e-61
ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [...   238   2e-60

>ref|XP_003523609.1| PREDICTED: protein DCL, chloroplastic-like [Glycine max]
          Length = 203

 Score =  305 bits (782), Expect = 1e-80
 Identities = 147/191 (76%), Positives = 161/191 (84%), Gaps = 2/191 (1%)
 Frame = -1

Query: 916 CFHNSKRFTAGAFVARHRLWCSAATNPQSDEADNKVISG--SNTLNLRSDKYTPPSYPRW 743
           CFHN +RFTAG   ARHRLWCSAA N  SDEA+ K  SG  SN+   R  +Y P S  RW
Sbjct: 15  CFHNYQRFTAGGVAARHRLWCSAAANLPSDEAEKKTNSGGISNSSFARKAQYPPSSEARW 74

Query: 742 KDDPDPDFRKWKDKEDEILRDIEPILLLTKDILHSQRYLDGERLTLEDERAIVEKLLAYH 563
           +DDPD  +RKWKDKE EIL DIEPI++L KDILHS+RY+DG RL  EDE+AIVEKLLAYH
Sbjct: 75  EDDPD--YRKWKDKEKEILSDIEPIVVLAKDILHSRRYMDGARLNEEDEKAIVEKLLAYH 132

Query: 562 PHSEDKIGCGLESIMVDRHPQFQHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPTHAER 383
           PHSEDKIGCGLESIMVDRHPQ++ SRCLFVVRTDGGWIDFSYQKCLREYIR+KYPTHAER
Sbjct: 133 PHSEDKIGCGLESIMVDRHPQYRQSRCLFVVRTDGGWIDFSYQKCLREYIRDKYPTHAER 192

Query: 382 FIREHFKRGSG 350
           FIREHFKRGSG
Sbjct: 193 FIREHFKRGSG 203


>ref|XP_002283006.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|302142270|emb|CBI19473.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  256 bits (653), Expect = 1e-65
 Identities = 125/183 (68%), Positives = 142/183 (77%)
 Frame = -1

Query: 898 RFTAGAFVARHRLWCSAATNPQSDEADNKVISGSNTLNLRSDKYTPPSYPRWKDDPDPDF 719
           R  A  F    R WCS+  + +SD   N   +  NT  L S    P +YPRW D   PDF
Sbjct: 19  RLAAPLFTLAQRPWCSSTESSRSDV--NVSYADKNTTVLSSRD--PANYPRWDD---PDF 71

Query: 718 RKWKDKEDEILRDIEPILLLTKDILHSQRYLDGERLTLEDERAIVEKLLAYHPHSEDKIG 539
           RKWK++E+EILRDIEPI  LTK+ILHS RY+DGERLT EDE+A+VEKLL YHPHSEDKIG
Sbjct: 72  RKWKNREEEILRDIEPITSLTKEILHSDRYMDGERLTAEDEKAVVEKLLIYHPHSEDKIG 131

Query: 538 CGLESIMVDRHPQFQHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPTHAERFIREHFKR 359
           CGL+ IMVDRHPQF+HSRCLFVVRTDGGWIDFSYQKCLR YIR+KYP+HA+RFIR HFKR
Sbjct: 132 CGLDCIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYIRDKYPSHADRFIRVHFKR 191

Query: 358 GSG 350
            SG
Sbjct: 192 SSG 194


>ref|XP_002877497.1| hypothetical protein ARALYDRAFT_905861 [Arabidopsis lyrata subsp.
           lyrata] gi|297323335|gb|EFH53756.1| hypothetical protein
           ARALYDRAFT_905861 [Arabidopsis lyrata subsp. lyrata]
          Length = 203

 Score =  243 bits (619), Expect = 9e-62
 Identities = 118/178 (66%), Positives = 135/178 (75%)
 Frame = -1

Query: 886 GAFVARHRLWCSAATNPQSDEADNKVISGSNTLNLRSDKYTPPSYPRWKDDPDPDFRKWK 707
           G    R RLWCS A  PQ  E D+        +N  S    P     W+ + DPD+RKWK
Sbjct: 30  GILSHRRRLWCSLADKPQFYENDSTAEGSGAGMNTTS----PAVDNSWRFE-DPDYRKWK 84

Query: 706 DKEDEILRDIEPILLLTKDILHSQRYLDGERLTLEDERAIVEKLLAYHPHSEDKIGCGLE 527
           + E EILRDIEPI LL K+ILHS RYLDGERL  EDE+ ++EKLLAYHP+S+DKIGCGL+
Sbjct: 85  NLEAEILRDIEPIALLAKEILHSDRYLDGERLEFEDEKIVMEKLLAYHPYSKDKIGCGLD 144

Query: 526 SIMVDRHPQFQHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPTHAERFIREHFKRGS 353
            IMVDRHPQF+HSRCLFVVRTDGGWIDFSYQKCLR Y+R+KYP+HAERFIREHFKR S
Sbjct: 145 FIMVDRHPQFRHSRCLFVVRTDGGWIDFSYQKCLRAYVRDKYPSHAERFIREHFKRAS 202


>ref|XP_002510162.1| conserved hypothetical protein [Ricinus communis]
           gi|223550863|gb|EEF52349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 234

 Score =  239 bits (611), Expect = 7e-61
 Identities = 121/182 (66%), Positives = 137/182 (75%)
 Frame = -1

Query: 898 RFTAGAFVARHRLWCSAATNPQSDEADNKVISGSNTLNLRSDKYTPPSYPRWKDDPDPDF 719
           R  A  F    R W SAA + + DE  +   +  NT  L S    P  YPRW D   PD+
Sbjct: 60  RIPARIFSPLRRPWSSAADSTRLDEEGSS--ADKNTAVLSS--LEPTKYPRWDD---PDY 112

Query: 718 RKWKDKEDEILRDIEPILLLTKDILHSQRYLDGERLTLEDERAIVEKLLAYHPHSEDKIG 539
            KW++KE+EI+ DI+ I  L K+ILHS RYLDGERLT EDE+AIVEKLLA+HP+SEDKIG
Sbjct: 113 CKWRNKEEEIMNDIQSITALAKEILHSDRYLDGERLTDEDEKAIVEKLLAHHPNSEDKIG 172

Query: 538 CGLESIMVDRHPQFQHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPTHAERFIREHFKR 359
           CGL+SIMVDRHPQF+HSRCLFVVR DGGWIDFSYQKCLR YIR KYP HAERFIREHFKR
Sbjct: 173 CGLDSIMVDRHPQFRHSRCLFVVRIDGGWIDFSYQKCLRAYIRHKYPAHAERFIREHFKR 232

Query: 358 GS 353
           GS
Sbjct: 233 GS 234


>ref|XP_004141276.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
          Length = 196

 Score =  238 bits (608), Expect = 2e-60
 Identities = 115/171 (67%), Positives = 135/171 (78%)
 Frame = -1

Query: 865 RLWCSAATNPQSDEADNKVISGSNTLNLRSDKYTPPSYPRWKDDPDPDFRKWKDKEDEIL 686
           R  CSA     S  +D  + +G N  ++ S    PP Y RW +   PD+RKWK++E+EIL
Sbjct: 32  RFCCSATA--ASTPSDGDLTAGDNATSVVSVS-EPPKYLRWDE---PDYRKWKNQEEEIL 85

Query: 685 RDIEPILLLTKDILHSQRYLDGERLTLEDERAIVEKLLAYHPHSEDKIGCGLESIMVDRH 506
            DIEPI+ LTK+ILHS RY DGERLTLEDER +V++LLA+HPH+EDKIGCGLESIMVDRH
Sbjct: 86  GDIEPIIFLTKEILHSHRYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRH 145

Query: 505 PQFQHSRCLFVVRTDGGWIDFSYQKCLREYIREKYPTHAERFIREHFKRGS 353
           PQF+ SRC FV+RTDGGWIDFSYQKCLR YIR KYP+ AERFIREHFKRGS
Sbjct: 146 PQFRQSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS 196


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