BLASTX nr result

ID: Glycyrrhiza24_contig00016784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016784
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatul...   215   3e-54
ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synth...   204   5e-51
ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synth...   201   7e-50
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              192   2e-47
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   192   2e-47

>ref|XP_003615969.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517304|gb|AES98927.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 483

 Score =  215 bits (547), Expect = 3e-54
 Identities = 106/128 (82%), Positives = 118/128 (92%)
 Frame = -2

Query: 386 TLLGHDYVEINICGDSFMLHQIRKMVATAVAVKRELIPRDILSLSLVKFSRITLPIAPPE 207
           TLLG++Y+EI++ GDSFMLHQIRKMV TAVAVKR  IP+DI  LSL+KFSRI LPIAPPE
Sbjct: 325 TLLGYNYIEIDVWGDSFMLHQIRKMVGTAVAVKRNSIPKDIFLLSLIKFSRIVLPIAPPE 384

Query: 206 VLILRGNSFRMRSGAGNHTRPEMVSMVESEQILKAVDEFYTSVMLPQLSKFLDSSKSPWA 27
           VLILRGN+FRM S  G++TRPEMVSMVESEQILK+VDEFYTSVMLP+LSKFLDSSKSPWA
Sbjct: 385 VLILRGNAFRMWSSGGSYTRPEMVSMVESEQILKSVDEFYTSVMLPELSKFLDSSKSPWA 444

Query: 26  DWVEKLDK 3
           DWVEKLDK
Sbjct: 445 DWVEKLDK 452


>ref|XP_003518334.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 516

 Score =  204 bits (520), Expect = 5e-51
 Identities = 101/128 (78%), Positives = 114/128 (89%)
 Frame = -2

Query: 386 TLLGHDYVEINICGDSFMLHQIRKMVATAVAVKRELIPRDILSLSLVKFSRITLPIAPPE 207
           T LG+DY+E++I GDSFMLHQIRKMV TAVAVKR LIPRD + LSL KFSRI LP+APPE
Sbjct: 358 TSLGYDYIEVHIWGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVLPLAPPE 417

Query: 206 VLILRGNSFRMRSGAGNHTRPEMVSMVESEQILKAVDEFYTSVMLPQLSKFLDSSKSPWA 27
           VLILRGN+F+MR+ AGN TR EMVSMVESEQIL+AVDEFYTSV+LP++SKFLDSS SPWA
Sbjct: 418 VLILRGNAFKMRASAGNFTRQEMVSMVESEQILEAVDEFYTSVVLPEVSKFLDSSNSPWA 477

Query: 26  DWVEKLDK 3
            WVE LDK
Sbjct: 478 KWVENLDK 485


>ref|XP_003557058.1| PREDICTED: putative tRNA pseudouridine synthase-like [Glycine max]
          Length = 518

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/128 (77%), Positives = 111/128 (86%)
 Frame = -2

Query: 386 TLLGHDYVEINICGDSFMLHQIRKMVATAVAVKRELIPRDILSLSLVKFSRITLPIAPPE 207
           T LG+DYVE+++ GDSFMLHQIRKMV TAVAVKR LIPRD + LSL KFSRI  P+APPE
Sbjct: 360 TSLGYDYVEVHVWGDSFMLHQIRKMVGTAVAVKRNLIPRDAILLSLSKFSRIVFPLAPPE 419

Query: 206 VLILRGNSFRMRSGAGNHTRPEMVSMVESEQILKAVDEFYTSVMLPQLSKFLDSSKSPWA 27
           VLILRGN+F+MR+ AGN TR EMVSMVESE ILKA DEFYTSV+LP++SKFLDSS SPWA
Sbjct: 420 VLILRGNAFKMRASAGNFTRQEMVSMVESEPILKAADEFYTSVVLPEVSKFLDSSSSPWA 479

Query: 26  DWVEKLDK 3
            WVE LDK
Sbjct: 480 KWVENLDK 487


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/124 (75%), Positives = 110/124 (88%)
 Frame = -2

Query: 380 LGHDYVEINICGDSFMLHQIRKMVATAVAVKRELIPRDILSLSLVKFSRITLPIAPPEVL 201
           LG DYVE++ICG+SFMLHQIRKMV TA+AVKREL+PRDIL+LSL KFSRI LP+AP EVL
Sbjct: 339 LGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVL 398

Query: 200 ILRGNSFRMRSGAGNHTRPEMVSMVESEQILKAVDEFYTSVMLPQLSKFLDSSKSPWADW 21
           ILRGNSF +R   GN  RPEM++++ESE+ILK+VDEFYTSV+LPQ+SKFLD SKSPW DW
Sbjct: 399 ILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDW 458

Query: 20  VEKL 9
           +E L
Sbjct: 459 LENL 462


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  192 bits (489), Expect = 2e-47
 Identities = 93/124 (75%), Positives = 110/124 (88%)
 Frame = -2

Query: 380 LGHDYVEINICGDSFMLHQIRKMVATAVAVKRELIPRDILSLSLVKFSRITLPIAPPEVL 201
           LG DYVE++ICG+SFMLHQIRKMV TA+AVKREL+PRDIL+LSL KFSRI LP+AP EVL
Sbjct: 360 LGLDYVELSICGESFMLHQIRKMVGTAIAVKRELLPRDILTLSLTKFSRIVLPLAPSEVL 419

Query: 200 ILRGNSFRMRSGAGNHTRPEMVSMVESEQILKAVDEFYTSVMLPQLSKFLDSSKSPWADW 21
           ILRGNSF +R   GN  RPEM++++ESE+ILK+VDEFYTSV+LPQ+SKFLD SKSPW DW
Sbjct: 420 ILRGNSFSVRKKPGNVKRPEMLTLMESEEILKSVDEFYTSVILPQVSKFLDPSKSPWHDW 479

Query: 20  VEKL 9
           +E L
Sbjct: 480 LENL 483