BLASTX nr result

ID: Glycyrrhiza24_contig00016764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016764
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containi...   228   5e-58
ref|XP_003590654.1| WD repeat-containing protein [Medicago trunc...   206   1e-51
ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containi...   186   1e-45
emb|CBI26594.3| unnamed protein product [Vitis vinifera]              186   1e-45
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   180   9e-44

>ref|XP_003536907.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  228 bits (580), Expect = 5e-58
 Identities = 110/128 (85%), Positives = 121/128 (94%)
 Frame = -3

Query: 441 PSYTTWELLTWGYLKKKDVKKILDYFSKAISSVKKWSPDHRLVQEAFEVIEEQAHTEGAE 262
           P YTTWEL TWGYLK+KDV+K LDYFSKAISSV KWSPD RLVQEAF++IEEQAHT+GAE
Sbjct: 388 PCYTTWELFTWGYLKRKDVEKFLDYFSKAISSVTKWSPDQRLVQEAFKIIEEQAHTKGAE 447

Query: 261 QLLVILRDAGHVNTNIYNLFLKTYATAGKMPLIVSERMKKDNVQLDEETHRLLGLTSKMC 82
           QLLVILR+AGHVNTNIYNLFLKTYATAGKMP+IV+ERM+KDNV+LDEET RLL LTSKMC
Sbjct: 448 QLLVILRNAGHVNTNIYNLFLKTYATAGKMPMIVAERMRKDNVKLDEETRRLLDLTSKMC 507

Query: 81  VSNVSRIL 58
           VS+VSRIL
Sbjct: 508 VSDVSRIL 515


>ref|XP_003590654.1| WD repeat-containing protein [Medicago truncatula]
           gi|355479702|gb|AES60905.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 562

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/120 (85%), Positives = 110/120 (91%)
 Frame = -3

Query: 438 SYTTWELLTWGYLKKKDVKKILDYFSKAISSVKKWSPDHRLVQEAFEVIEEQAHTEGAEQ 259
           SY++WELLT GYLKKKDVKK L YF KAISSVK+W PD RLVQEAF VI+EQAH EGAEQ
Sbjct: 385 SYSSWELLTRGYLKKKDVKKFLHYFGKAISSVKQWIPDPRLVQEAFTVIQEQAHIEGAEQ 444

Query: 258 LLVILRDAGHVNTNIYNLFLKTYATAGKMPLIVSERMKKDNVQLDEETHRLLGLTSKMCV 79
           LLVILR+AGHVNTNIYNLFLKTYA AGKMPL+V+ERMKKDNVQLD+ETHRLL LTSKMCV
Sbjct: 445 LLVILRNAGHVNTNIYNLFLKTYAAAGKMPLVVAERMKKDNVQLDKETHRLLDLTSKMCV 504


>ref|XP_002279399.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02820,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/125 (69%), Positives = 106/125 (84%)
 Frame = -3

Query: 441 PSYTTWELLTWGYLKKKDVKKILDYFSKAISSVKKWSPDHRLVQEAFEVIEEQAHTEGAE 262
           PSYTTWELLTWGYLKKK ++K+LDYF KA+ SVKKW+PD +LV+E ++ +EEQ + EGAE
Sbjct: 512 PSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAE 571

Query: 261 QLLVILRDAGHVNTNIYNLFLKTYATAGKMPLIVSERMKKDNVQLDEETHRLLGLTSKMC 82
           ++LVILR AGHV+T IYN  L+ YA AGKMPLIV+E MKKD V++DEETHRL+  TSKMC
Sbjct: 572 KVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 631

Query: 81  VSNVS 67
           VS VS
Sbjct: 632 VSEVS 636


>emb|CBI26594.3| unnamed protein product [Vitis vinifera]
          Length = 529

 Score =  186 bits (473), Expect = 1e-45
 Identities = 87/125 (69%), Positives = 106/125 (84%)
 Frame = -3

Query: 441 PSYTTWELLTWGYLKKKDVKKILDYFSKAISSVKKWSPDHRLVQEAFEVIEEQAHTEGAE 262
           PSYTTWELLTWGYLKKK ++K+LDYF KA+ SVKKW+PD +LV+E ++ +EEQ + EGAE
Sbjct: 399 PSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAE 458

Query: 261 QLLVILRDAGHVNTNIYNLFLKTYATAGKMPLIVSERMKKDNVQLDEETHRLLGLTSKMC 82
           ++LVILR AGHV+T IYN  L+ YA AGKMPLIV+E MKKD V++DEETHRL+  TSKMC
Sbjct: 459 KVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 518

Query: 81  VSNVS 67
           VS VS
Sbjct: 519 VSEVS 523


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  180 bits (457), Expect = 9e-44
 Identities = 83/120 (69%), Positives = 102/120 (85%)
 Frame = -3

Query: 441 PSYTTWELLTWGYLKKKDVKKILDYFSKAISSVKKWSPDHRLVQEAFEVIEEQAHTEGAE 262
           PSYTTWELLTWGYLKKK ++K+LDYF KA+ SVKKW+PD +LV+E ++ +EEQ + EGAE
Sbjct: 399 PSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQGNIEGAE 458

Query: 261 QLLVILRDAGHVNTNIYNLFLKTYATAGKMPLIVSERMKKDNVQLDEETHRLLGLTSKMC 82
           ++LVILR AGHV+T IYN  L+ YA AGKMPLIV+E MKKD V++DEETHRL+  TSKMC
Sbjct: 459 KVLVILRKAGHVSTEIYNWLLRAYAKAGKMPLIVAEWMKKDKVEMDEETHRLIKETSKMC 518


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