BLASTX nr result

ID: Glycyrrhiza24_contig00016746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016746
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago ...    78   9e-13
ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783...    77   1e-12
ref|NP_001235674.1| uncharacterized protein LOC100306482 [Glycin...    71   1e-10
gb|AFK35294.1| unknown [Medicago truncatula]                           69   5e-10
ref|XP_003598460.1| Sigma factor binding protein [Medicago trunc...    69   5e-10

>ref|XP_003627923.1| hypothetical protein MTR_8g040080 [Medicago truncatula]
           gi|355521945|gb|AET02399.1| hypothetical protein
           MTR_8g040080 [Medicago truncatula]
          Length = 118

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 56/106 (52%), Positives = 65/106 (61%), Gaps = 8/106 (7%)
 Frame = -2

Query: 317 VKVKTSASNFRALVQELTGQDSNVAEITSM--------SSLLGTTNYSAPQQQQWRVQDH 162
           VKVKT+ASNFRALVQELTGQDSNVAE T+M           +    YS    QQWRV DH
Sbjct: 23  VKVKTNASNFRALVQELTGQDSNVAETTTMPLQEKYCDDERVNKGAYST--HQQWRV-DH 79

Query: 161 VPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 24
           VP       + T LK DYS EFLSR + +   ++H +  DLLSF M
Sbjct: 80  VPH------QNTFLKPDYS-EFLSRQSFVEPLSEH-VQCDLLSFDM 117


>ref|XP_003546708.1| PREDICTED: uncharacterized protein LOC100783939 [Glycine max]
          Length = 122

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 54/108 (50%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
 Frame = -2

Query: 317 VKVKTSASNFRALVQELTGQDSNVAEIT--------SMSSLLGTTNYSAPQQQQWRVQDH 162
           VKVKTSASNFRALVQELTGQ SNVAE +            +  T ++   + QQWRV   
Sbjct: 24  VKVKTSASNFRALVQELTGQYSNVAETSIPMEEDNGHSERVHRTHHHHESETQQWRVN-- 81

Query: 161 VPQYGYLHDEATLL--KHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 24
                   DE T L   H+YS EFLSRS + P N Q  L YDL+SF M
Sbjct: 82  -------VDEGTNLMKPHEYS-EFLSRSLMEPFNQQQLLQYDLMSFDM 121


>ref|NP_001235674.1| uncharacterized protein LOC100306482 [Glycine max]
           gi|255628679|gb|ACU14684.1| unknown [Glycine max]
          Length = 123

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 51/108 (47%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
 Frame = -2

Query: 317 VKVKTSASNFRALVQELTGQDSNVAEITSMSSLLGTTNYS----------APQQQQWRVQ 168
           VKVKTSASNFRALVQELTGQ SNVAE TSM        +S            + Q WRV 
Sbjct: 24  VKVKTSASNFRALVQELTGQYSNVAE-TSMPMEEEENGHSERVHKTHLLHESETQLWRVD 82

Query: 167 DHVPQYGYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 24
                   + +   L+K     E+LSRS + P N Q  L YDLLSF M
Sbjct: 83  --------VDEGTNLMKPLEYSEYLSRSLMEPFNQQQHLQYDLLSFDM 122


>gb|AFK35294.1| unknown [Medicago truncatula]
          Length = 135

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
 Frame = -2

Query: 317 VKVKTSASNFRALVQELTGQDSNVA----EITSMSSLLGTTNYSAPQQQQWRVQDHVPQY 150
           +KVKTSASNFRALVQELTGQDSNVA    E+     +    N      +QW   D+    
Sbjct: 38  MKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQWS-SDNNSSE 96

Query: 149 GYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 24
           G++ D +T +K     ++  RS++ PLN   QL YD LSF M
Sbjct: 97  GFMPDYSTWMK--LEDDYNLRSSMEPLNG--QLQYDFLSFDM 134


>ref|XP_003598460.1| Sigma factor binding protein [Medicago truncatula]
           gi|355487508|gb|AES68711.1| Sigma factor binding protein
           [Medicago truncatula]
          Length = 128

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 46/102 (45%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
 Frame = -2

Query: 317 VKVKTSASNFRALVQELTGQDSNVA----EITSMSSLLGTTNYSAPQQQQWRVQDHVPQY 150
           +KVKTSASNFRALVQELTGQDSNVA    E+     +    N      +QW   D+    
Sbjct: 31  MKVKTSASNFRALVQELTGQDSNVADMFVEVNDFVHVDDVQNQQKNSIEQWS-SDNNSSE 89

Query: 149 GYLHDEATLLKHDYSHEFLSRSTLLPLNNQHQLPYDLLSFPM 24
           G++ D +T +K     ++  RS++ PLN   QL YD LSF M
Sbjct: 90  GFMPDYSTWMK--LEDDYNLRSSMEPLNG--QLQYDFLSFDM 127


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