BLASTX nr result

ID: Glycyrrhiza24_contig00016709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016709
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex ...   290   6e-77
gb|AFK34824.1| unknown [Medicago truncatula]                          289   1e-76
ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex ...   251   6e-65
emb|CBI33274.3| unnamed protein product [Vitis vinifera]              251   6e-65
ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854...   249   2e-64

>ref|XP_003529686.1| PREDICTED: snRNA-activating protein complex subunit 3-like [Glycine
           max]
          Length = 435

 Score =  290 bits (743), Expect = 6e-77
 Identities = 129/150 (86%), Positives = 140/150 (93%)
 Frame = -2

Query: 499 KKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGYLYCHQGDCS 320
           KKWEYII GELQ+KQKAIMGE S S LPHF S+EMHKIRFCDLSF+LGAGYLYCHQGDC+
Sbjct: 286 KKWEYIITGELQKKQKAIMGEKSASQLPHFRSIEMHKIRFCDLSFQLGAGYLYCHQGDCT 345

Query: 319 HTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDDKWTPENPCY 140
           HTLVIRDMRLIHP+DVHNRAVYP++TFQLK+RFQKC VCKIFRATKVTVDDKWTPENPCY
Sbjct: 346 HTLVIRDMRLIHPEDVHNRAVYPIITFQLKLRFQKCNVCKIFRATKVTVDDKWTPENPCY 405

Query: 139 FCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 50
           FCD+CFSLLH   DG+ LYTDF+EYDYNHD
Sbjct: 406 FCDECFSLLHQADDGTLLYTDFVEYDYNHD 435


>gb|AFK34824.1| unknown [Medicago truncatula]
          Length = 447

 Score =  289 bits (740), Expect = 1e-76
 Identities = 132/151 (87%), Positives = 140/151 (92%), Gaps = 1/151 (0%)
 Frame = -2

Query: 499 KKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGYLYCHQGDCS 320
           KKWEYIINGELQQKQKAI+GEASVSHLP F S EMHKI FCDL FRLGAGYLYCHQGDC+
Sbjct: 297 KKWEYIINGELQQKQKAIVGEASVSHLPRFASFEMHKIHFCDLGFRLGAGYLYCHQGDCT 356

Query: 319 HTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDDKWTPENPCY 140
           HTLVIRDMRLIH DDV N AVYP+VTFQLK+RFQKCGVCKIFRATKVTVDDKWTP+NPCY
Sbjct: 357 HTLVIRDMRLIHADDVQNWAVYPIVTFQLKIRFQKCGVCKIFRATKVTVDDKWTPDNPCY 416

Query: 139 FCDDCFSLLHLDVD-GSPLYTDFLEYDYNHD 50
           FCD+CFSLLHL  D GSP+YTDF+EYDYNHD
Sbjct: 417 FCDECFSLLHLAEDGGSPMYTDFIEYDYNHD 447


>ref|XP_002265978.2| PREDICTED: snRNA-activating protein complex subunit 3-like, partial
           [Vitis vinifera]
          Length = 315

 Score =  251 bits (640), Expect = 6e-65
 Identities = 108/150 (72%), Positives = 129/150 (86%)
 Frame = -2

Query: 499 KKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGYLYCHQGDCS 320
           +KWE II+G+LQQKQKA++G+ ++SHLPHF +V+MHK RFCDL FRLGAGYLYCHQGDC 
Sbjct: 166 EKWECIISGDLQQKQKALLGDPTISHLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCR 225

Query: 319 HTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDDKWTPENPCY 140
           HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDDKW PENPCY
Sbjct: 226 HTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCY 285

Query: 139 FCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 50
           FCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 286 FCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 315


>emb|CBI33274.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  251 bits (640), Expect = 6e-65
 Identities = 108/150 (72%), Positives = 129/150 (86%)
 Frame = -2

Query: 499 KKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGYLYCHQGDCS 320
           +KWE II+G+LQQKQKA++G+ ++SHLPHF +V+MHK RFCDL FRLGAGYLYCHQGDC 
Sbjct: 96  EKWECIISGDLQQKQKALLGDPTISHLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCR 155

Query: 319 HTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDDKWTPENPCY 140
           HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDDKW PENPCY
Sbjct: 156 HTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCY 215

Query: 139 FCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 50
           FCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 216 FCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 245


>ref|XP_003635535.1| PREDICTED: uncharacterized protein LOC100854109 [Vitis vinifera]
          Length = 443

 Score =  249 bits (635), Expect = 2e-64
 Identities = 108/150 (72%), Positives = 128/150 (85%)
 Frame = -2

Query: 499 KKWEYIINGELQQKQKAIMGEASVSHLPHFTSVEMHKIRFCDLSFRLGAGYLYCHQGDCS 320
           +KWE II+GELQQKQKA++G+ ++S LPHF +V+MHK RFCDL FRLGAGYLYCHQGDC 
Sbjct: 294 EKWECIISGELQQKQKALLGDPTISRLPHFKAVDMHKTRFCDLQFRLGAGYLYCHQGDCR 353

Query: 319 HTLVIRDMRLIHPDDVHNRAVYPVVTFQLKMRFQKCGVCKIFRATKVTVDDKWTPENPCY 140
           HT+VIRDMRL HP+DV +RA YP++TFQLK R QKC VCKI+RATKVTVDDKW PENPCY
Sbjct: 354 HTIVIRDMRLFHPEDVGDRAAYPILTFQLKSRVQKCCVCKIYRATKVTVDDKWAPENPCY 413

Query: 139 FCDDCFSLLHLDVDGSPLYTDFLEYDYNHD 50
           FCD+C+ LLH   DGS LY +F  YDY+H+
Sbjct: 414 FCDNCYFLLHYSEDGSLLYKEFSVYDYHHE 443


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