BLASTX nr result

ID: Glycyrrhiza24_contig00016701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016701
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]       106   2e-21
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...   103   2e-20
ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819...   103   2e-20
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]    96   2e-18
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...    91   1e-16

>gb|ABD32333.1| polyprotein-like, putative [Medicago truncatula]
          Length = 635

 Score =  106 bits (265), Expect = 2e-21
 Identities = 48/79 (60%), Positives = 59/79 (74%)
 Frame = +3

Query: 3   DITHVVQPLSQFLASPTAVHFKYDQRVLRYLKGNPGKGIFFPRSSPLQLLGFTHVDWTGC 182
           DIT + Q LSQFL+ PT  H+    RVL+YLKG+PGKGIFFPR+S L + G+T  DW GC
Sbjct: 403 DITFITQQLSQFLSKPTQTHYHATLRVLKYLKGSPGKGIFFPRASGLHIQGYTDADWVGC 462

Query: 183 PDSRRFVSGYCFFLA*SLI 239
            D+RR +SG+CFFL  SLI
Sbjct: 463 KDTRRSISGHCFFLGQSLI 481


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = +3

Query: 3    DITHVVQPLSQFLASPTAVHFKYDQRVLRYLKGNPGKGIFFPRSSPLQLLGFTHVDWTGC 182
            DI    Q LSQF+ +PT VHF    RVLRYLK NPG+GIFF R+S +QL+G++  DW GC
Sbjct: 1207 DIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGC 1266

Query: 183  PDSRRFVSGYCFFLA*SLI 239
             DSR+ +SGYCFF+  SL+
Sbjct: 1267 MDSRKSISGYCFFIGKSLV 1285


>ref|XP_003551446.1| PREDICTED: uncharacterized protein LOC100819074 [Glycine max]
          Length = 1750

 Score =  103 bits (256), Expect = 2e-20
 Identities = 46/79 (58%), Positives = 58/79 (73%)
 Frame = +3

Query: 3    DITHVVQPLSQFLASPTAVHFKYDQRVLRYLKGNPGKGIFFPRSSPLQLLGFTHVDWTGC 182
            DI    Q LSQF+ +PT VHF    RVLRYLK NPG+GIFF R+S +QL+G++  DW GC
Sbjct: 1043 DIAFATQQLSQFMQAPTNVHFNAACRVLRYLKNNPGQGIFFSRTSEMQLIGYSDADWAGC 1102

Query: 183  PDSRRFVSGYCFFLA*SLI 239
             DSR+ +SGYCFF+  SL+
Sbjct: 1103 MDSRKSISGYCFFIGKSLV 1121


>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
          Length = 1243

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = +3

Query: 3    DITHVVQPLSQFLASPTAVHFKYDQRVLRYLKGNPGKGIFFPRSSPLQLLGFTHVDWTGC 182
            DI++VV  LSQF++ P   H    QR+LRYLKGNPG G+FFP +S L L+ +T  DW  C
Sbjct: 1057 DISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTDSDWARC 1116

Query: 183  PDSRRFVSGYCFFLA*SLI 239
            PDSRR V+G+C FL  SL+
Sbjct: 1117 PDSRRSVTGFCVFLGNSLV 1135


>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 43/79 (54%), Positives = 55/79 (69%)
 Frame = +3

Query: 3    DITHVVQPLSQFLASPTAVHFKYDQRVLRYLKGNPGKGIFFPRSSPLQLLGFTHVDWTGC 182
            DIT  V  LSQFL++PT +H +   +VLRYLKGNPG+G+ +  SS L L GF+  DW  C
Sbjct: 833  DITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTC 892

Query: 183  PDSRRFVSGYCFFLA*SLI 239
             DSRR V+G+C +L  SLI
Sbjct: 893  KDSRRSVTGFCIYLGTSLI 911


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