BLASTX nr result

ID: Glycyrrhiza24_contig00016677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016677
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554297.1| PREDICTED: rho GDP-dissociation inhibitor 1-...   107   2e-42
gb|AFK38850.1| unknown [Lotus japonicus]                              102   6e-39
gb|ACJ85966.1| unknown [Medicago truncatula] gi|388520799|gb|AFK...    86   9e-34
emb|CAF02295.1| Rho GDP dissociation inhibitor 1 [Medicago trunc...    86   9e-34
ref|XP_003542434.1| PREDICTED: rho GDP-dissociation inhibitor 1-...    81   2e-30

>ref|XP_003554297.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max]
          Length = 233

 Score =  107 bits (268), Expect(2) = 2e-42
 Identities = 60/93 (64%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -2

Query: 477 GGNGKNRALEEEQAGPSSGIDATRLEMSEKPLXXXXXXXXXXXXXXEG-IGDNKNGVFVP 301
           GGNGK      E+AGPSSGID  +LEM+EK                EG I D+KNG FVP
Sbjct: 4   GGNGKRA---HEEAGPSSGIDGRKLEMTEKASDDDKEEEEEEEEEEEGAIEDSKNGFFVP 60

Query: 300 APLVSLKEQIERDKEDESLRRWKEKLLGCLESD 202
            PL+SLKEQIERDKEDESLRRWKEKLLGCLESD
Sbjct: 61  GPLLSLKEQIERDKEDESLRRWKEKLLGCLESD 93



 Score = 90.9 bits (224), Expect(2) = 2e-42
 Identities = 43/46 (93%), Positives = 45/46 (97%)
 Frame = -3

Query: 140 SDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENQNGRTLFTLRE 3
           SD+DGQLDPEVKFHSIGILSEDFGEIVTPLPVDEN+NG TLFTLRE
Sbjct: 92  SDIDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENRNGCTLFTLRE 137


>gb|AFK38850.1| unknown [Lotus japonicus]
          Length = 236

 Score =  102 bits (255), Expect(2) = 6e-39
 Identities = 60/94 (63%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = -2

Query: 477 GGNGKNRALEEEQAGPS-SGIDATRLEMSEKPLXXXXXXXXXXXXXXE-GIGDNKNGVFV 304
           GGNGK +  EEEQAG S SG+D T+ EM EKP               E G G +  GVFV
Sbjct: 4   GGNGK-KPQEEEQAGTSASGVDPTKQEMIEKPFHDGKEEEEEAEEEEEEGTGVHTKGVFV 62

Query: 303 PAPLVSLKEQIERDKEDESLRRWKEKLLGCLESD 202
           P PL+SLKEQIERDKEDESLRRWKEKLLGCLESD
Sbjct: 63  PGPLLSLKEQIERDKEDESLRRWKEKLLGCLESD 96



 Score = 84.0 bits (206), Expect(2) = 6e-39
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -3

Query: 140 SDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENQNGRTLFTLRE 3
           SDLD Q+DPEVKFHSIGILSEDFGEIVTPLPV+E+QNGR LFTL E
Sbjct: 95  SDLDAQVDPEVKFHSIGILSEDFGEIVTPLPVEESQNGRPLFTLWE 140


>gb|ACJ85966.1| unknown [Medicago truncatula] gi|388520799|gb|AFK48461.1| unknown
           [Medicago truncatula]
          Length = 231

 Score = 85.5 bits (210), Expect(2) = 9e-34
 Identities = 51/94 (54%), Positives = 61/94 (64%)
 Frame = -2

Query: 483 MEGGNGKNRALEEEQAGPSSGIDATRLEMSEKPLXXXXXXXXXXXXXXEGIGDNKNGVFV 304
           MEGG    ++ E+EQAGPSS ID T    +EKP                   +++  VFV
Sbjct: 1   MEGGK---KSHEQEQAGPSSAIDKT----TEKPTHTFHVASEDE--------EDEGQVFV 45

Query: 303 PAPLVSLKEQIERDKEDESLRRWKEKLLGCLESD 202
           P+PL+SLKEQIE+DKEDESLRRWKEKLLG LESD
Sbjct: 46  PSPLLSLKEQIEKDKEDESLRRWKEKLLGSLESD 79



 Score = 84.0 bits (206), Expect(2) = 9e-34
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -3

Query: 140 SDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENQNGRTLFTLRE 3
           SDLD QL+PEVKFHSIGILSEDFGEIVTPLPV+E+QN R LFTLRE
Sbjct: 78  SDLDDQLEPEVKFHSIGILSEDFGEIVTPLPVEEHQNSRMLFTLRE 123


>emb|CAF02295.1| Rho GDP dissociation inhibitor 1 [Medicago truncatula]
          Length = 219

 Score = 85.5 bits (210), Expect(2) = 9e-34
 Identities = 51/94 (54%), Positives = 61/94 (64%)
 Frame = -2

Query: 483 MEGGNGKNRALEEEQAGPSSGIDATRLEMSEKPLXXXXXXXXXXXXXXEGIGDNKNGVFV 304
           MEGG    ++ E+EQAGPSS ID T    +EKP                   +++  VFV
Sbjct: 1   MEGGK---KSHEQEQAGPSSAIDKT----TEKPTHTFHVASEDE--------EDEGQVFV 45

Query: 303 PAPLVSLKEQIERDKEDESLRRWKEKLLGCLESD 202
           P+PL+SLKEQIE+DKEDESLRRWKEKLLG LESD
Sbjct: 46  PSPLLSLKEQIEKDKEDESLRRWKEKLLGSLESD 79



 Score = 84.0 bits (206), Expect(2) = 9e-34
 Identities = 40/46 (86%), Positives = 43/46 (93%)
 Frame = -3

Query: 140 SDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENQNGRTLFTLRE 3
           SDLD QL+PEVKFHSIGILSEDFGEIVTPLPV+E+QN R LFTLRE
Sbjct: 78  SDLDDQLEPEVKFHSIGILSEDFGEIVTPLPVEEHQNSRMLFTLRE 123


>ref|XP_003542434.1| PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max]
          Length = 239

 Score = 80.9 bits (198), Expect(2) = 2e-30
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -3

Query: 140 SDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVDENQNGRTLFTLRE 3
           SDLDGQ+ PEVKFHSIGI+SEDFGE++TPL VDE+QNG  LFTL+E
Sbjct: 99  SDLDGQIHPEVKFHSIGIISEDFGEVITPLSVDESQNGHILFTLKE 144



 Score = 77.4 bits (189), Expect(2) = 2e-30
 Identities = 45/103 (43%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
 Frame = -2

Query: 483 MEGGNGKNRALEEEQAGPSSGIDATRLEMSEKP---------LXXXXXXXXXXXXXXEGI 331
           MEG N K   + EE+AGPSS       +    P                        + +
Sbjct: 1   MEGANWK---ITEEEAGPSSSSGIASNKQQNPPETFHHQHHRKEAAAEEEETEEEEEDDV 57

Query: 330 GDNKNGVFVPAPLVSLKEQIERDKEDESLRRWKEKLLGCLESD 202
             + N  FVP PL+SLK+QIE+DKEDESLRRWKEKLLGC+ESD
Sbjct: 58  DHHNNSTFVPGPLLSLKDQIEKDKEDESLRRWKEKLLGCMESD 100


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