BLASTX nr result

ID: Glycyrrhiza24_contig00016659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016659
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601289.1| Polygalacturonase-1 non-catalytic subunit be...   115   4e-24
ref|XP_003522375.1| PREDICTED: polygalacturonase-1 non-catalytic...   108   6e-22
ref|XP_003528153.1| PREDICTED: polygalacturonase-1 non-catalytic...   101   7e-20
emb|CBI15046.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002279813.1| PREDICTED: probable polygalacturonase non-ca...    74   9e-12

>ref|XP_003601289.1| Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula] gi|355490337|gb|AES71540.1|
           Polygalacturonase-1 non-catalytic subunit beta [Medicago
           truncatula]
          Length = 628

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/88 (67%), Positives = 66/88 (75%)
 Frame = +1

Query: 85  HSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHKP 264
           +SKQ  NPF+PKASLIR+WNT+ SNKLPIPN  LSKASPLTP  YA LIN      K KP
Sbjct: 30  YSKQKTNPFTPKASLIRHWNTKTSNKLPIPNFFLSKASPLTPQHYANLIN----LFKQKP 85

Query: 265 FFSSQFHQSLCSTPNLFCTFDHPNTPHQ 348
             SS  H +LCSTP LFC+FDHPNT +Q
Sbjct: 86  -SSSNLHNTLCSTPYLFCSFDHPNTLYQ 112


>ref|XP_003522375.1| PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like
           [Glycine max]
          Length = 664

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/90 (62%), Positives = 65/90 (72%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q + ++INPFSPKASLIRYWNTR+SN LPIP+ LLSKAS LTPH YAIL   LN     K
Sbjct: 67  QTTLELINPFSPKASLIRYWNTRVSNNLPIPHLLLSKASTLTPHHYAILSKLLN----QK 122

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQ 351
           P  +   H SLCS+PNL C+FD  +TP  Q
Sbjct: 123 PKPNENLHHSLCSSPNLLCSFD--DTPFAQ 150


>ref|XP_003528153.1| PREDICTED: polygalacturonase-1 non-catalytic subunit beta-like
           [Glycine max]
          Length = 629

 Score =  101 bits (251), Expect = 7e-20
 Identities = 53/90 (58%), Positives = 66/90 (73%)
 Frame = +1

Query: 82  QHSKQIINPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILINHLNLHIKHK 261
           Q + ++INPFSPKASLIRYWNTR+SN   IP+ LLSKASPLTP  YA+L N L  + K +
Sbjct: 31  QTTHELINPFSPKASLIRYWNTRVSNNNQIPHFLLSKASPLTPQNYAVL-NKLLTNQKPR 89

Query: 262 PFFSSQFHQSLCSTPNLFCTFDHPNTPHQQ 351
           P  +   H SLCS+PNL C+FD  +TP+ Q
Sbjct: 90  P--NENLHHSLCSSPNLLCSFD--DTPNAQ 115


>emb|CBI15046.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = +1

Query: 103 NPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILI-----NHLNLHIKHKPF 267
           NPF+ KASLIRYWN +ISNKLP P+ LLSKASPL     A+L      N L+ H+     
Sbjct: 40  NPFTAKASLIRYWNKQISNKLPKPSFLLSKASPLNAVDSAVLTKLATQNALSSHL----- 94

Query: 268 FSSQFHQSLCSTPNLFCTFDHPNTPHQQ 351
                  S CS+ NLFC FD   T  +Q
Sbjct: 95  ------SSFCSSANLFCVFDSSPTSEKQ 116


>ref|XP_002279813.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Vitis vinifera]
          Length = 630

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
 Frame = +1

Query: 103 NPFSPKASLIRYWNTRISNKLPIPNSLLSKASPLTPHQYAILI-----NHLNLHIKHKPF 267
           NPF+ KASLIRYWN +ISNKLP P+ LLSKASPL     A+L      N L+ H+     
Sbjct: 37  NPFTAKASLIRYWNKQISNKLPKPSFLLSKASPLNAVDSAVLTKLATQNALSSHL----- 91

Query: 268 FSSQFHQSLCSTPNLFCTFDHPNTPHQQ 351
                  S CS+ NLFC FD   T  +Q
Sbjct: 92  ------SSFCSSANLFCVFDSSPTSEKQ 113


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