BLASTX nr result

ID: Glycyrrhiza24_contig00016640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016640
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536002.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   290   8e-77
ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   288   4e-76
ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   287   7e-76
ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   286   1e-75
ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   277   7e-73

>ref|XP_003536002.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 736

 Score =  290 bits (742), Expect = 8e-77
 Identities = 147/167 (88%), Positives = 162/167 (97%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 LFPIQRAVLLPAMEGRDIIARAKTGTGKTLAFGIPIIRGIT-DDEQTTHRRSGRLPKVLV 324
           LFPIQRAVL+PA+EG+DIIARAKTGTGKTLAFGIPI++G+T DDEQ+ HRRSGRLPK LV
Sbjct: 115 LFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPILKGLTNDDEQSPHRRSGRLPKALV 174

Query: 323 LAPTRELARQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLING 144
           LAPTRELA+QVEKEI+ESAPYL TVCVYGGVSYVTQQ+ALSRGVDVVVGTPGRIIDL+NG
Sbjct: 175 LAPTRELAKQVEKEIQESAPYLKTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLVNG 234

Query: 143 NSLKLSEVQYVVLDEADQMLAVGFAEDVEVILEEVPSQRQTMLFSAT 3
           NSLKLSEVQY+VLDEADQMLAVGF EDVEVIL++VP+QRQTMLFSAT
Sbjct: 235 NSLKLSEVQYLVLDEADQMLAVGFEEDVEVILDKVPTQRQTMLFSAT 281


>ref|XP_003554590.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  288 bits (736), Expect = 4e-76
 Identities = 147/167 (88%), Positives = 161/167 (96%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 LFPIQRAVLLPAMEGRDIIARAKTGTGKTLAFGIPIIRGITDDEQT-THRRSGRLPKVLV 324
           LFPIQRAVL+PA+EGRDIIARAKTGTGKTLAFGIPII+G+T+DE   +HRRSGRLP+ LV
Sbjct: 133 LFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEDEHAPSHRRSGRLPRFLV 192

Query: 323 LAPTRELARQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLING 144
           LAPTRELA+QVEKEIKESAPYL+TVCVYGGVSYVTQQ+ALSRGVDVVVGTPGRIIDLING
Sbjct: 193 LAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQSALSRGVDVVVGTPGRIIDLING 252

Query: 143 NSLKLSEVQYVVLDEADQMLAVGFAEDVEVILEEVPSQRQTMLFSAT 3
           NSLKLSEVQY+VLDEADQMLAVGF EDVE+ILE +PSQRQ+MLFSAT
Sbjct: 253 NSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPSQRQSMLFSAT 299


>ref|XP_003555166.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 736

 Score =  287 bits (734), Expect = 7e-76
 Identities = 145/167 (86%), Positives = 161/167 (96%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 LFPIQRAVLLPAMEGRDIIARAKTGTGKTLAFGIPIIRGITDD-EQTTHRRSGRLPKVLV 324
           LFPIQRAVL+PA+EG+DIIARAKTGTGKTLAFGIPI++G+TDD EQ++HRRSGRLPK LV
Sbjct: 117 LFPIQRAVLVPALEGKDIIARAKTGTGKTLAFGIPILKGLTDDDEQSSHRRSGRLPKALV 176

Query: 323 LAPTRELARQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLING 144
           LAPTRELA+QVEKEI+ESAPYL TVCVYGGVSYVTQQ ALS GVDVVVGTPGRIIDL+NG
Sbjct: 177 LAPTRELAKQVEKEIQESAPYLKTVCVYGGVSYVTQQGALSHGVDVVVGTPGRIIDLVNG 236

Query: 143 NSLKLSEVQYVVLDEADQMLAVGFAEDVEVILEEVPSQRQTMLFSAT 3
           NSLKLSEVQY+VLDEAD+MLAVGF EDVEVIL++VP+QRQTMLFSAT
Sbjct: 237 NSLKLSEVQYLVLDEADRMLAVGFEEDVEVILDKVPAQRQTMLFSAT 283


>ref|XP_003521635.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  286 bits (732), Expect = 1e-75
 Identities = 146/167 (87%), Positives = 160/167 (95%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 LFPIQRAVLLPAMEGRDIIARAKTGTGKTLAFGIPIIRGITDDEQT-THRRSGRLPKVLV 324
           LFPIQRAVL+PA+EGRDIIARAKTGTGKTLAFGIPII+G+T+DE   +HRRSGRLP+ LV
Sbjct: 134 LFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPIIKGLTEDEHAPSHRRSGRLPRFLV 193

Query: 323 LAPTRELARQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLING 144
           LAPTRELA+QVEKEIKESAPYL+TVCVYGGVSYVTQQ ALSRGVDVVVGTPGRIIDLING
Sbjct: 194 LAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQGALSRGVDVVVGTPGRIIDLING 253

Query: 143 NSLKLSEVQYVVLDEADQMLAVGFAEDVEVILEEVPSQRQTMLFSAT 3
           NSLKLSEVQY+VLDEADQMLAVGF EDVE+ILE +P+QRQ+MLFSAT
Sbjct: 254 NSLKLSEVQYLVLDEADQMLAVGFEEDVEMILENLPAQRQSMLFSAT 300


>ref|XP_002278318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
           [Vitis vinifera] gi|296089875|emb|CBI39694.3| unnamed
           protein product [Vitis vinifera]
          Length = 764

 Score =  277 bits (708), Expect = 7e-73
 Identities = 141/168 (83%), Positives = 160/168 (95%), Gaps = 2/168 (1%)
 Frame = -1

Query: 500 LFPIQRAVLLPAMEGRDIIARAKTGTGKTLAFGIPIIRGITDDEQ--TTHRRSGRLPKVL 327
           LFPIQRAVL+PA+EGRD+IARAKTGTGKTLAFGIPII+ +++D++  T+ RRSGRLP+VL
Sbjct: 139 LFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIKRLSEDDEKRTSQRRSGRLPRVL 198

Query: 326 VLAPTRELARQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLIN 147
           VLAPTRELA+QVEKEIKESAPYL+TVCVYGGVSY+TQQNALSRGVDVVVGTPGRIIDLI 
Sbjct: 199 VLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYITQQNALSRGVDVVVGTPGRIIDLIK 258

Query: 146 GNSLKLSEVQYVVLDEADQMLAVGFAEDVEVILEEVPSQRQTMLFSAT 3
           GNSLKL EVQ +VLDEADQMLAVGF EDVEVILE++PS+RQ+MLFSAT
Sbjct: 259 GNSLKLGEVQNLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSAT 306