BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016631
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   553   e-155
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   453   e-125
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   445   e-122
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   432   e-119
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-...   405   e-110

>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  553 bits (1425), Expect = e-155
 Identities = 288/343 (83%), Positives = 315/343 (91%)
 Frame = +3

Query: 6    DVRIGIVAVEISTGDVVYGEFNDNFLRSALEAAVVSLSPAELLLGEPLSKQTEKLLRAFA 185
            D RIGIVAVEISTGDVV+GEF D FLRSALEA V++LSPAELLLG+PLSKQTEKLL  FA
Sbjct: 241  DARIGIVAVEISTGDVVFGEFCDGFLRSALEAVVLNLSPAELLLGDPLSKQTEKLLLDFA 300

Query: 186  GTASNVRVEHASLDCFTNGGALAEVMTLYENMHVDSSSDSMQSNNLTEHRSQEMVVKEVM 365
            G ASNVRVE  S DCF +GGALAEVMTLYENMH+DS SDS+QSN+LTE+RSQ++++KEVM
Sbjct: 301  GPASNVRVERFSRDCFIDGGALAEVMTLYENMHIDSPSDSIQSNDLTENRSQKLIIKEVM 360

Query: 366  NLPDLAIQALALTIRHLKEFGFERILGSGASLRPFVSNTEMILSANTLQQLEVLQNNSDG 545
            N+PDLA+QALALTIRHLKEFGFERIL SGAS+RPF SNTEM LSAN LQQLEVL+NNSDG
Sbjct: 361  NMPDLAVQALALTIRHLKEFGFERILCSGASIRPFSSNTEMTLSANALQQLEVLKNNSDG 420

Query: 546  SESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAESMGSCNGMKNLG 725
            SE GSLLQIMN TLTIFGSRLLRHWVSHPLCDQTLISARL+AVSEIA+SMGSCN +KNL 
Sbjct: 421  SEIGSLLQIMNRTLTIFGSRLLRHWVSHPLCDQTLISARLHAVSEIAQSMGSCNSVKNLV 480

Query: 726  RFEEDPDVAIVQPELAYILSVVLTALGRAPDIQRGITRIFHGTATPSEFIAVIQAILSAG 905
            R EEDPDVAIVQPELAY LS+VLT LGRAPDIQRGITRIFH TATPSEF+AVIQAILSAG
Sbjct: 481  RVEEDPDVAIVQPELAYTLSLVLTTLGRAPDIQRGITRIFHCTATPSEFVAVIQAILSAG 540

Query: 906  KRLQQLNIGEEDNNKLRSDLLKKLILTSSSPSVIGNAAKLLSS 1034
            K+LQQLNIGE +NN LR +LLKKLILT+SS SVIGNAAK+LSS
Sbjct: 541  KQLQQLNIGEGNNNTLRPNLLKKLILTASSDSVIGNAAKMLSS 583


>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  453 bits (1165), Expect = e-125
 Identities = 240/352 (68%), Positives = 284/352 (80%), Gaps = 8/352 (2%)
 Frame = +3

Query: 3    FDVRIGIVAVEISTGDVVYGEFNDNFLRSALEAAVVSLSPAELLLGEPLSKQTEKLLRAF 182
            FDVRIGIVAVE+STGDVV+GEFNDNF+R+ LEA ++S+SPAELLLG PLSKQTEKLL A+
Sbjct: 265  FDVRIGIVAVEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAY 324

Query: 183  AGTASNVRVEHASLDCFTNGGALAEVMTLYENMHVDSSSDSMQSNN-LTEHRSQEMVVKE 359
            AG ASNVRVE  S DCF++GGALAEVM+LYEN+  +S +D    N  + E  +  + ++ 
Sbjct: 325  AGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRADHQVDNTEVMEQENHCLAIEG 384

Query: 360  VMNLPDLAIQALALTIRHLKEFGFERILGSGASLRPFVSNTEMILSANTLQQLEVLQNNS 539
            +M++PDLA+QALALTIRHLK+FG ERIL  GAS RPF SN EM LSAN LQQLEVL N+S
Sbjct: 385  IMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANALQQLEVLNNHS 444

Query: 540  DGSESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAESMGSCNGMKN 719
            DGSESGSLL  MNHTLTIFGSRLLRHWVSHPLCD  +ISARL+AVSEI  SMGSC   +N
Sbjct: 445  DGSESGSLLHTMNHTLTIFGSRLLRHWVSHPLCDSNMISARLDAVSEIVMSMGSCKASQN 504

Query: 720  LGRFEE-DPDVAIVQPELAYILSVVLTALGRAPDIQRGITRIFHGTATPSEFIAVIQAIL 896
             G  +E D DV  VQPE+ Y+LS VLT LGR+PDIQRG+TRIFH TAT SEFI+V QAIL
Sbjct: 505  FGGIDEGDSDVTYVQPEVNYLLSSVLTTLGRSPDIQRGLTRIFHRTATASEFISVTQAIL 564

Query: 897  SAGKRLQQLNIGEED------NNKLRSDLLKKLILTSSSPSVIGNAAKLLSS 1034
             AGK+LQ+L+I E+D      +  +RS LL+KLILT+SS  +IGNAAKLLS+
Sbjct: 565  FAGKQLQRLHIEEKDVDEKGQSRSVRSVLLRKLILTASSSGIIGNAAKLLST 616


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  445 bits (1144), Expect = e-122
 Identities = 244/354 (68%), Positives = 282/354 (79%), Gaps = 10/354 (2%)
 Frame = +3

Query: 3    FDVRIGIVAVEISTGDVVYGEFNDNFLRSALEAAVVSLSPAELLLGEPLSKQTEKLLRAF 182
            FD RIG VAVEISTGDVVYGEFND FLRS LEA V+SL PAELLLG+PLSKQTEKLL A+
Sbjct: 256  FDTRIGFVAVEISTGDVVYGEFNDGFLRSGLEAVVLSLMPAELLLGDPLSKQTEKLLLAY 315

Query: 183  AGTASNVRVEHASLDCFTNGGALAEVMTLYENMHVDSSSDSMQSNNLTEHRSQE---MVV 353
            AG +SNVRVE AS   F +GGALAEV+ LYENM    + D    N + E   Q+   + +
Sbjct: 316  AGPSSNVRVERASGHHFNDGGALAEVILLYENMGEHKAEDD--ENQMMERTHQDISYLAI 373

Query: 354  KEVMNLPDLAIQALALTIRHLKEFGFERILGSGASLRPFVSNTEMILSANTLQQLEVLQN 533
            + +MN+PDLA+QALALTI HLK+FGFE+IL  GAS RP  SN EM LSANTLQQLEVL+N
Sbjct: 374  EGIMNMPDLAVQALALTISHLKQFGFEQILRLGASFRPLTSNVEMNLSANTLQQLEVLRN 433

Query: 534  NSDGSESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAESMGSCNGM 713
            NS+GS+SGSL  IMNHTLTI GSRLLRHWV+HPLCD+ +ISARL+AVSEIAESMGS   +
Sbjct: 434  NSNGSDSGSLFNIMNHTLTISGSRLLRHWVTHPLCDRNMISARLDAVSEIAESMGSYKAL 493

Query: 714  KNLGRF-EEDPDVAIVQPELAYILSVVLTALGRAPDIQRGITRIFHGTATPSEFIAVIQA 890
            +N G F EED DVAI+QP+  ++LS VL  LGR+PDIQRGITRIFH TAT SEFIAVIQA
Sbjct: 494  QNTGDFDEEDSDVAIIQPDFYHLLSTVLEMLGRSPDIQRGITRIFHRTATASEFIAVIQA 553

Query: 891  ILSAGKRLQQLNIGEEDNNK------LRSDLLKKLILTSSSPSVIGNAAKLLSS 1034
            IL AGK+L++L I EE NNK      +RS LLKKLILT SS SV+G+AAKLLS+
Sbjct: 554  ILIAGKQLRRLQIEEEQNNKRVQAKTVRSVLLKKLILTVSSSSVVGHAAKLLST 607


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  432 bits (1110), Expect = e-119
 Identities = 237/379 (62%), Positives = 288/379 (75%), Gaps = 35/379 (9%)
 Frame = +3

Query: 3    FDVRIGIVAVEISTGDVVYGEFNDNFLRSALEAAVVSLSPAELLLGEPLSKQTEKLLRAF 182
            FDVR+G+VAVEISTGDVVYGEFND F+RS LEA V+SL+PAELLLG+PLSKQTEKLL A+
Sbjct: 240  FDVRVGVVAVEISTGDVVYGEFNDGFMRSGLEAFVLSLAPAELLLGDPLSKQTEKLLLAY 299

Query: 183  AGTASNVRVEHASLDCFTNGGALAEVMTLYENMHVDSSSDS-MQSNNLTEHRSQEMVVKE 359
            +G +SNVRVE  S DCF++GGALA+VM+LYENM  D+  D+  Q  +  E  S  + ++ 
Sbjct: 300  SGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGDNEKQMTDAKEQGSCHLAIEG 359

Query: 360  VMNLPDLAIQALALTIRHLKEFGFERILGSGASLRPFVSNTEMILSANTLQQLEVLQNNS 539
            V+ +PDLA++ALALT+RHLK+FGF+R+L  GAS RPF SN EM LSANTLQQLEVL+NNS
Sbjct: 360  VIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFSSNMEMNLSANTLQQLEVLRNNS 419

Query: 540  DGSESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAESMGSCNGMKN 719
            DGSESGSLL IMNHTLTI+GSRLLRHWV+HPLCD+ +ISARL+AVSEIAE MG     + 
Sbjct: 420  DGSESGSLLHIMNHTLTIYGSRLLRHWVTHPLCDRNMISARLDAVSEIAECMGFSKDSQR 479

Query: 720  LGRF-EEDPDVAIVQPELAYILSVVLTALGRAPDIQRGITRIFHGTATPSE--------- 869
            +    E+D +VAIVQP+L Y+LS VLTALGR+PDI+RGITRIFH TAT SE         
Sbjct: 480  VSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIERGITRIFHRTATASEFLLMFLIMY 539

Query: 870  ------------------FIAVIQAILSAGKRLQQLNIGEEDN------NKLRSDLLKKL 977
                              FIAV QAIL+AGK+L++L I EE N        ++S LLK+L
Sbjct: 540  LTYLSSFSSPIAVLVWLWFIAVFQAILAAGKQLKRLCIQEEHNYDGVGSKTVKSVLLKRL 599

Query: 978  ILTSSSPSVIGNAAKLLSS 1034
            IL +SS SV+GNAAKLLS+
Sbjct: 600  ILAASSSSVVGNAAKLLST 618


>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
          Length = 1094

 Score =  405 bits (1040), Expect = e-110
 Identities = 219/350 (62%), Positives = 267/350 (76%), Gaps = 7/350 (2%)
 Frame = +3

Query: 6    DVRIGIVAVEISTGDVVYGEFNDNFLRSALEAAVVSLSPAELLLGEPLSKQTEKLLRAFA 185
            DV+IG+VA+EISTGDV+YGE++DNF+R+ LEA ++SLSPAELLLG+P+SK TEKLL  +A
Sbjct: 267  DVKIGMVAMEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYA 326

Query: 186  GTASNVRVEHASLDCFTNGGALAEVMTLYENMHVDS-SSDSMQSNNLTEHRSQEMVVKEV 362
            G A NVRVE  S DCF +G ALAEVM+LYEN+  ++ + D+     L   +S    +KE+
Sbjct: 327  GPALNVRVERVSGDCFKDGSALAEVMSLYENIDQNNFTEDNNPEKVLVGQKSNRSAIKEI 386

Query: 363  MNLPDLAIQALALTIRHLKEFGFERILGSGASLRPFVSNTEMILSANTLQQLEVLQNNSD 542
            +N+P+LA+QALALTIRHLK+FG ERI+   +S RPF    EM LS NTL QLEVL+NN D
Sbjct: 387  VNMPNLALQALALTIRHLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDD 446

Query: 543  GSESGSLLQIMNHTLTIFGSRLLRHWVSHPLCDQTLISARLNAVSEIAESMGSCN-GMKN 719
            GSE+GSLL  MNHTLTIFGSRLLR W++HPLCD+ +I AR  AVSEIA SM S      N
Sbjct: 447  GSETGSLLHCMNHTLTIFGSRLLRQWITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNN 506

Query: 720  LGRFEEDPDVAIVQPELAYILSVVLTALGRAPDIQRGITRIFHGTATPSEFIAVIQAILS 899
                EE  DV +++PEL YILS VLT LGRAPDIQRGITRIFH TA PSEFIAVIQAIL 
Sbjct: 507  RALDEEYSDVIVIEPELNYILSSVLTTLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILF 566

Query: 900  AGKRLQQLNIGEEDNN-----KLRSDLLKKLILTSSSPSVIGNAAKLLSS 1034
            AGK+LQQ +I EED+N      + S LL+KLIL++SS  +I  AAKLLS+
Sbjct: 567  AGKQLQQFHIDEEDDNCSSESIIGSKLLRKLILSASSSGLINIAAKLLST 616