BLASTX nr result

ID: Glycyrrhiza24_contig00016616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016616
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein r...   150   1e-34
ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein r...   142   3e-32
gb|AFK37766.1| unknown [Medicago truncatula]                           87   2e-15
ref|XP_003593237.1| Riboflavin biosynthesis protein [Medicago tr...    87   2e-15
emb|CBI34027.3| unnamed protein product [Vitis vinifera]               73   2e-11

>ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Glycine max]
          Length = 544

 Score =  150 bits (379), Expect = 1e-34
 Identities = 80/110 (72%), Positives = 88/110 (80%), Gaps = 5/110 (4%)
 Frame = -2

Query: 315 MASFNLSYFSSPALSSQRACKHSKMFNDMASIRLNYKFPSSDNAVHRTKATLKSGGGDLL 136
           MASFNLSY SSPALS  RA K  K+FND+  +R+N KFPSSDNA+ R KA L SGGGDLL
Sbjct: 1   MASFNLSYSSSPALSCPRASKQFKLFNDVPFVRMNSKFPSSDNAIGRIKAKLISGGGDLL 60

Query: 135 SYPNGNDIVIDKDLVGDESVGIE-----ALAADTGLTNNVFSLDNDEFDL 1
           SYPNGN IVI K+LVGDESV IE      LAADTGLT+NVFS+DNDEFDL
Sbjct: 61  SYPNGNGIVIGKNLVGDESVRIEVQPNRTLAADTGLTSNVFSIDNDEFDL 110


>ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein ribBA,
           chloroplastic-like [Glycine max]
          Length = 544

 Score =  142 bits (358), Expect = 3e-32
 Identities = 76/109 (69%), Positives = 85/109 (77%), Gaps = 5/109 (4%)
 Frame = -2

Query: 315 MASFNLSYFSSPALSSQRACKHSKMFNDMASIRLNYKFPSSDNAVHRTKATLKSGGGDLL 136
           MASFNLSY SSPALS  RA KH K FND+  +R+N KFPSSDNA  R KA L SGGG+LL
Sbjct: 1   MASFNLSYSSSPALSRPRASKHFKFFNDVPFVRMNSKFPSSDNAFGRIKAMLISGGGELL 60

Query: 135 SYPNGNDIVIDKDLVGDESVGIE-----ALAADTGLTNNVFSLDNDEFD 4
           S+PNGNDIVI  +LVGDESV IE      LA DTGLT+NVFS+DN+EFD
Sbjct: 61  SHPNGNDIVIGTNLVGDESVQIEVQPNGTLADDTGLTSNVFSMDNNEFD 109


>gb|AFK37766.1| unknown [Medicago truncatula]
          Length = 541

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
 Frame = -2

Query: 288 SSPALSSQRACKHSKMFNDMASIRLNYKFPSSDNAVHRTKATLKSGGGDLLSYP-NGNDI 112
           SSP LS  R   H K+FND   ++LNYK  S+ +A  R K+ L SGGGDLLSYP N NDI
Sbjct: 12  SSPLLSCPRPSNHFKLFNDFPLVKLNYKSSSTHSAAFRVKSALASGGGDLLSYPKNTNDI 71

Query: 111 VIDKDL-VGDESVGIEALA-----ADTGLTNNVFSLDNDEFDL 1
           +I KDL VG +S+ ++  +     +D+G+ +  FS D +++DL
Sbjct: 72  IIGKDLVVGTQSILVQEQSNGTPTSDSGIPSTFFSADYNDYDL 114


>ref|XP_003593237.1| Riboflavin biosynthesis protein [Medicago truncatula]
           gi|355482285|gb|AES63488.1| Riboflavin biosynthesis
           protein [Medicago truncatula]
          Length = 541

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 48/103 (46%), Positives = 67/103 (65%), Gaps = 7/103 (6%)
 Frame = -2

Query: 288 SSPALSSQRACKHSKMFNDMASIRLNYKFPSSDNAVHRTKATLKSGGGDLLSYP-NGNDI 112
           SSP LS  R   H K+FND   ++LNYK  S+ +A  R K+ L SGGGDLLSYP N NDI
Sbjct: 12  SSPLLSCPRPSNHFKLFNDFPLVKLNYKSSSTHSAAFRVKSALASGGGDLLSYPKNTNDI 71

Query: 111 VIDKDL-VGDESVGIEALA-----ADTGLTNNVFSLDNDEFDL 1
           +I KDL VG +S+ ++  +     +D+G+ +  FS D +++DL
Sbjct: 72  IIGKDLVVGTQSILVQEQSNGTPTSDSGIPSTFFSADYNDYDL 114


>emb|CBI34027.3| unnamed protein product [Vitis vinifera]
          Length = 845

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 54/129 (41%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
 Frame = -2

Query: 315 MASFNLSYFSSPALSSQRACKHSKMFN---------------DMASIRLNYKFPSSDNAV 181
           MAS N S   + A+S  RACK+ K+FN               D+A IRL  K   +    
Sbjct: 287 MASINASC-PTAAISRLRACKNFKLFNGLHGVNPSLSNWYTSDLALIRLGSKSSFTIKGD 345

Query: 180 HRTKATLKSGGGDLLSYPNGNDIVIDKDLVGDESVGIE---------ALAADTGLTNNVF 28
            RT+ATL SG G LLSY NGN++     +  D+SVGIE          L ADT    N F
Sbjct: 346 GRTRATLISGEGGLLSYSNGNNVAA---ITKDQSVGIEIQPDAIAFGTLEADTAPATNGF 402

Query: 27  SLDNDEFDL 1
            +DNDEFDL
Sbjct: 403 PIDNDEFDL 411


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