BLASTX nr result

ID: Glycyrrhiza24_contig00016568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016568
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   113   2e-23
ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula] g...   112   3e-23
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   111   5e-23
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]   111   7e-23
ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]   110   1e-22

>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/68 (82%), Positives = 62/68 (91%)
 Frame = -3

Query: 241 MLSELGRRPVLGSNDGSFGVELEKEIGMMLREQRRHEVDDCEPELNMYRSGSAPPSVEGS 62
           MLSELGRRP+LGSN+GSFG ELEKEIGM+LREQRR E DD E ELN+YRSGSAPP+VEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIYRSGSAPPTVEGS 60

Query: 61  LSALDGLF 38
           LSA+ GLF
Sbjct: 61  LSAVGGLF 68


>ref|XP_003597396.1| Pumilio-like protein [Medicago truncatula]
           gi|87241276|gb|ABD33134.1| Nucleic acid binding NABP
           [Medicago truncatula] gi|355486444|gb|AES67647.1|
           Pumilio-like protein [Medicago truncatula]
          Length = 1047

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/69 (79%), Positives = 63/69 (91%), Gaps = 1/69 (1%)
 Frame = -3

Query: 241 MLSELGRRPVLGS-NDGSFGVELEKEIGMMLREQRRHEVDDCEPELNMYRSGSAPPSVEG 65
           MLS++GRRPV+G  N+GSFG E EKEIGM+LR+QRRHEVDD EPELNMYRSGSAPP+VEG
Sbjct: 1   MLSDMGRRPVIGGGNEGSFGDEFEKEIGMLLRDQRRHEVDDHEPELNMYRSGSAPPTVEG 60

Query: 64  SLSALDGLF 38
           SLSA+ GLF
Sbjct: 61  SLSAVGGLF 69


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  111 bits (278), Expect = 5e-23
 Identities = 55/68 (80%), Positives = 62/68 (91%)
 Frame = -3

Query: 241 MLSELGRRPVLGSNDGSFGVELEKEIGMMLREQRRHEVDDCEPELNMYRSGSAPPSVEGS 62
           MLSELGRRP+LGSN+GSFG ELEKEIGM+LREQRR E DD E ELN++RSGSAPP+VEGS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVEGS 60

Query: 61  LSALDGLF 38
           LSA+ GLF
Sbjct: 61  LSAVGGLF 68


>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1054

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/68 (80%), Positives = 61/68 (89%)
 Frame = -3

Query: 241 MLSELGRRPVLGSNDGSFGVELEKEIGMMLREQRRHEVDDCEPELNMYRSGSAPPSVEGS 62
           MLSELG RP+LG N+GSFG ELEKEIGM+LREQRR EVDD E ELN+YRSGSAPP+VEGS
Sbjct: 1   MLSELGTRPMLGGNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSAPPTVEGS 60

Query: 61  LSALDGLF 38
           LSA+ GLF
Sbjct: 61  LSAVGGLF 68


>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/68 (79%), Positives = 62/68 (91%)
 Frame = -3

Query: 241 MLSELGRRPVLGSNDGSFGVELEKEIGMMLREQRRHEVDDCEPELNMYRSGSAPPSVEGS 62
           MLSELGRRP+LGSN+GSFG ELEKEIGM+LREQRR E DD E ELN++RSGSAPP+V+GS
Sbjct: 1   MLSELGRRPMLGSNEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPTVDGS 60

Query: 61  LSALDGLF 38
           LSA+ GLF
Sbjct: 61  LSAVGGLF 68


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