BLASTX nr result

ID: Glycyrrhiza24_contig00016532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016532
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   270   1e-70
ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807...   254   8e-66
ref|XP_003626275.1| DNA polymerase [Medicago truncatula] gi|3555...   238   6e-61
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...    87   2e-15
ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...    79   6e-13

>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  270 bits (689), Expect = 1e-70
 Identities = 134/178 (75%), Positives = 154/178 (86%)
 Frame = -2

Query: 534  DDEIHSHHKRASGRSVRTHSIRKNTSFSRSKDDEPDFDSDEQLSVISNFKPSHVSAAALK 355
            DD++H+ HK ASGRSV++ SIRKNTSFS SKDDE DF +DEQLSV+SNFK  HVSA+  K
Sbjct: 2500 DDKMHARHKTASGRSVQSRSIRKNTSFSGSKDDELDFGTDEQLSVVSNFKYGHVSASDRK 2559

Query: 354  RKGRGPTKKLSFGSESDEDVGGGLYSDENDDLNEAYSSRKNKGNNYDPSRQSKGNRNDSG 175
            RKGRGP+KKLSFGSES+ED+GGGLYSDE+ DLNE YS RKNKGN  DP RQ+KGNR+DSG
Sbjct: 2560 RKGRGPSKKLSFGSESEEDMGGGLYSDEDGDLNEEYSFRKNKGNKGDPCRQNKGNRHDSG 2619

Query: 174  RRNFTKDRKSGSVGGRKANMFSDDDFDESSRKSYRNGRGSQGSDRDWKRFGDFDGSSR 1
            RRNFTKDRKSGS+GGR+ANM S DDFD SS++SYRN RGSQG+DR+ K F DFDG SR
Sbjct: 2620 RRNFTKDRKSGSIGGRRANMLS-DDFDGSSQQSYRNSRGSQGNDRNRKSFEDFDGPSR 2676


>ref|XP_003553723.1| PREDICTED: uncharacterized protein LOC100807006 [Glycine max]
          Length = 846

 Score =  254 bits (648), Expect = 8e-66
 Identities = 127/178 (71%), Positives = 148/178 (83%)
 Frame = -2

Query: 534  DDEIHSHHKRASGRSVRTHSIRKNTSFSRSKDDEPDFDSDEQLSVISNFKPSHVSAAALK 355
            DD++H+  K ASGRS ++ SIRKNTSFS S DDE  F +DEQLSV+SNFK  HVSAA  K
Sbjct: 553  DDKMHARRKTASGRSAQSRSIRKNTSFSGSDDDELKFGTDEQLSVVSNFKSGHVSAADRK 612

Query: 354  RKGRGPTKKLSFGSESDEDVGGGLYSDENDDLNEAYSSRKNKGNNYDPSRQSKGNRNDSG 175
            RKGRGP+KKLSFGSES+E++G GLYSDE+DDLNE YS RKNKGN  D SRQ+KGNR+DSG
Sbjct: 613  RKGRGPSKKLSFGSESEEEIGAGLYSDEDDDLNEEYSFRKNKGNKRDLSRQNKGNRHDSG 672

Query: 174  RRNFTKDRKSGSVGGRKANMFSDDDFDESSRKSYRNGRGSQGSDRDWKRFGDFDGSSR 1
            RRNFTKDRKSGS+GGR+ NMFS DDFD SS++SYRN RGS+ +D + K F DFDG SR
Sbjct: 673  RRNFTKDRKSGSIGGRQTNMFS-DDFDGSSQQSYRNSRGSRENDHNRKSFEDFDGPSR 729


>ref|XP_003626275.1| DNA polymerase [Medicago truncatula] gi|355501290|gb|AES82493.1| DNA
            polymerase [Medicago truncatula]
          Length = 886

 Score =  238 bits (606), Expect = 6e-61
 Identities = 127/181 (70%), Positives = 145/181 (80%), Gaps = 2/181 (1%)
 Frame = -2

Query: 537  IDDEIHSHHKR--ASGRSVRTHSIRKNTSFSRSKDDEPDFDSDEQLSVISNFKPSHVSAA 364
            IDD++H+H+K   ASGR+ RT S+RKNTSFSRSK+DE D+DSDEQ S++S FK SHV AA
Sbjct: 559  IDDKMHAHNKSKTASGRTERTRSVRKNTSFSRSKEDELDYDSDEQRSLLSKFKSSHVFAA 618

Query: 363  ALKRKGRGPTKKLSFGSESDEDVGGGLYSDENDDLNEAYSSRKNKGNNYDPSRQSKGNRN 184
              +RKGRGPTKKLSFGS+SDED   GLYSDE+DDLNEAYSSR+N           KGNR+
Sbjct: 619  DQRRKGRGPTKKLSFGSDSDEDGSAGLYSDEDDDLNEAYSSRQN-----------KGNRH 667

Query: 183  DSGRRNFTKDRKSGSVGGRKANMFSDDDFDESSRKSYRNGRGSQGSDRDWKRFGDFDGSS 4
            DSGRRNFTKD KSG  GG K+NMF  DDFDES R+SYRN RGSQGS+RD KRF DFDGSS
Sbjct: 668  DSGRRNFTKDGKSG--GGYKSNMFG-DDFDESPRQSYRNARGSQGSNRDKKRFDDFDGSS 724

Query: 3    R 1
            R
Sbjct: 725  R 725


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 71/215 (33%), Positives = 103/215 (47%), Gaps = 38/215 (17%)
 Frame = -2

Query: 534  DDEIHSHHKRASGRSVR-THSIRKNTSFSRSKDDEPDFDSDEQLSVISNFKPSHVSAAAL 358
            DD +H+H ++     V+ + S+RK  +FS S+DDE + DSDE+LSV   +K SHV+ A  
Sbjct: 1784 DDNLHTHPRKNLPSYVKPSKSMRKRATFSGSQDDELEIDSDEELSVYPKWKSSHVADARH 1843

Query: 357  KRKGR---GPTKKLSFG--------SESDEDVGGGLYSDENDDL------------NEAY 247
            K +GR   GP+++LSFG        S+ DED G G        L            N ++
Sbjct: 1844 KNRGRSPAGPSRRLSFGSDEEIELDSDGDEDFGSGQRKGNKQGLGRRSYQRSSGLRNASF 1903

Query: 246  SSRK-------NKGNNYDPSRQSKGNRNDS----GRRNFTKDRKSGSVG--GRKANMFSD 106
            S  +       ++G+    ++   G R D     G   F  D K    G  G K N + +
Sbjct: 1904 SGSESEDDQLYSRGDRSGRNKMEAGGRRDDFRGHGDHAFASDGKGRPKGKMGDKRNSW-N 1962

Query: 105  DDFDESSRKSYRNGRG-SQGSDRDWKRFGDFDGSS 4
            DDF  SS +S+   RG  +  DR   R  +FD SS
Sbjct: 1963 DDFKRSSHRSHDKNRGLGKMGDRRNSRNDNFDRSS 1997


>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 47/219 (21%)
 Frame = -2

Query: 516  HHKRASGRSVRTHSIRKNTSFSRSKDDEPDFDSDEQLSVISNFKPSHVSAAALKRKG-RG 340
            H  ++S  +  +  I +  + S  +DDE D DSDE+LSV   +K SHV+ +  + +G  G
Sbjct: 1751 HQTKSSKYNKSSRPIHRKAALSGIEDDELDLDSDEELSVNPKWKSSHVADSRQRGRGATG 1810

Query: 339  PTKKLSFGSE--------SDEDVG---------------------------GGLYSDEND 265
            P++ LSFGS+        +D+D+G                            G +S+ ND
Sbjct: 1811 PSRGLSFGSDEELGLGSGTDDDLGEDFGSQSKRNKLGSGRRDRWRGGSDTEDGHFSESND 1870

Query: 264  DLNEAYSSRKNKGNNYDPSRQSKGNRNDSGRRNFTKDRK--SGSVGGRKANMFSDDDFDE 91
            D   +Y SR NK     P R+   +R   G  +FT D K  S S  G + N F +DDF+ 
Sbjct: 1871 DDPRSYRSRANKA---APGRRQNNSRG-RGDFDFTHDSKFRSNSARGGRRNSF-NDDFNR 1925

Query: 90   SS--RKSYRNGRGSQGSDRDWKR-------FGDFDGSSR 1
            SS   +  +N  G +G+D D  R       F DF+G  R
Sbjct: 1926 SSPGSRGGKNRGGFRGNDYDGPRMSNRAGNFRDFNGPRR 1964


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