BLASTX nr result

ID: Glycyrrhiza24_contig00016512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016512
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   637   e-180
ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...   635   e-180
ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|2...   551   e-154
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   549   e-154
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   547   e-153

>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  637 bits (1642), Expect = e-180
 Identities = 326/371 (87%), Positives = 346/371 (93%)
 Frame = -3

Query: 1114 MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNF 935
            MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLK+VQLARS S+S GQGLNF
Sbjct: 127  MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKSVQLARSSSVSGGQGLNF 186

Query: 934  GNKNVNSFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQ 755
            GNKN+N   L EKEN QS  FL+K R  K APLKLIIMSASLDAR FSEYFGGAKAVHIQ
Sbjct: 187  GNKNMNK--LFEKENDQSGIFLKKPRHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQ 244

Query: 754  GRQFPVDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLT 575
            GRQFPVDIFYT   ETDY+DA++ITIFQ+HL EGPGDILVFLTGQEEIESVERLI+E+L 
Sbjct: 245  GRQFPVDIFYTRDAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLISEKLP 304

Query: 574  KLPEGSQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPG 395
            +LP+ SQ LLVVPIFAALPSEQQM+VFAP+P+G RKVILATNIAETSVTIPGIKYVIDPG
Sbjct: 305  QLPQESQKLLVVPIFAALPSEQQMRVFAPSPSGFRKVILATNIAETSVTIPGIKYVIDPG 364

Query: 394  FVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPE 215
            FVKARSYDPGKGMESLI++PTSKSQALQRSGRAGREGPGKCFRLYPE EFEKLEDSTMPE
Sbjct: 365  FVKARSYDPGKGMESLIIIPTSKSQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTMPE 424

Query: 214  IKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLFLLGALTDDCQLSDPVGR 35
            IKRCNLSNVILQLKALGVDDILGFDFI+KPSR AIIKSLEQLFLLGALTD+CQLSDPVG 
Sbjct: 425  IKRCNLSNVILQLKALGVDDILGFDFIDKPSRAAIIKSLEQLFLLGALTDECQLSDPVGH 484

Query: 34   QMARLPLDPVY 2
            QMARLPLDP+Y
Sbjct: 485  QMARLPLDPLY 495


>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score =  635 bits (1638), Expect = e-180
 Identities = 327/371 (88%), Positives = 344/371 (92%)
 Frame = -3

Query: 1114 MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNF 935
            MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARS S+S GQGL F
Sbjct: 127  MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSSSVSGGQGLIF 186

Query: 934  GNKNVNSFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQ 755
            GNKN+N   LLEKEN QS SFL+K    K APLKLIIMSASLDAR FSEYFGGAKAVHIQ
Sbjct: 187  GNKNMNK--LLEKENDQSGSFLKKPHHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQ 244

Query: 754  GRQFPVDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLT 575
            GRQFPVDIFYT   ETDY+DA++ITIFQ+HL EGPGDILVFLTGQEEIESVERLINE+L 
Sbjct: 245  GRQFPVDIFYTRDAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLINEKLP 304

Query: 574  KLPEGSQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPG 395
            +LP+ +Q LLVV IFAALPSEQQM+VFAPAP+G RKVILATNIAETSVTIPGIKYVIDPG
Sbjct: 305  QLPQENQKLLVVSIFAALPSEQQMRVFAPAPSGFRKVILATNIAETSVTIPGIKYVIDPG 364

Query: 394  FVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPE 215
            FVKARSYDPGKGMESLI++P SKSQALQRSGRAGREGPGKCFRLYPE EFEKLEDSTMPE
Sbjct: 365  FVKARSYDPGKGMESLIIIPASKSQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTMPE 424

Query: 214  IKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLFLLGALTDDCQLSDPVGR 35
            IKRCNLSNVILQLKALGVDDILGFDFIEKPSR AIIKSLEQLFLLGALTD+CQLSDPVG 
Sbjct: 425  IKRCNLSNVILQLKALGVDDILGFDFIEKPSRAAIIKSLEQLFLLGALTDECQLSDPVGH 484

Query: 34   QMARLPLDPVY 2
            QMARLPLDP+Y
Sbjct: 485  QMARLPLDPLY 495


>ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|222851165|gb|EEE88712.1|
            predicted protein [Populus trichocarpa]
          Length = 658

 Score =  551 bits (1420), Expect = e-154
 Identities = 286/371 (77%), Positives = 310/371 (83%)
 Frame = -3

Query: 1114 MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNF 935
            MTDGLLLREALLDPYLS+YSVIIVDEAHERTVHTDVL+GLLKNVQ AR  S         
Sbjct: 108  MTDGLLLREALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKNVQRARLKSC-------- 159

Query: 934  GNKNVNSFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQ 755
                                      Q K  PLKLIIMSASLDAR FSEYFGGA+AVH++
Sbjct: 160  --------------------------QRKFPPLKLIIMSASLDARLFSEYFGGARAVHVE 193

Query: 754  GRQFPVDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLT 575
            GRQ  VDIFYTL  ETDYVDAA+ITIFQ+HL EGPGDILVFLTGQEEIE VERL+ E+L 
Sbjct: 194  GRQHHVDIFYTLHAETDYVDAALITIFQIHLEEGPGDILVFLTGQEEIEGVERLVQEQLQ 253

Query: 574  KLPEGSQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPG 395
            KLPE S+ L+  PIF++LPSEQQM+VF PAPAG RKVILATNIAETSVTIPGIKYVIDPG
Sbjct: 254  KLPEESRKLVTAPIFSSLPSEQQMRVFMPAPAGHRKVILATNIAETSVTIPGIKYVIDPG 313

Query: 394  FVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPE 215
            F+KARSYDP KGMESLI++PTSK+QALQRSGRAGREGPGKCFRLYPE+EFEKLEDST PE
Sbjct: 314  FIKARSYDPVKGMESLIIIPTSKAQALQRSGRAGREGPGKCFRLYPESEFEKLEDSTKPE 373

Query: 214  IKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLFLLGALTDDCQLSDPVGR 35
            IKRCNLSNVILQLKALGVDDI+GFDF+EKPSR AI KSLE+LFLLGALTDDC+LSDPVG 
Sbjct: 374  IKRCNLSNVILQLKALGVDDIIGFDFLEKPSRAAIQKSLEELFLLGALTDDCKLSDPVGH 433

Query: 34   QMARLPLDPVY 2
            QMARLPLDP+Y
Sbjct: 434  QMARLPLDPIY 444


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
            vinifera]
          Length = 713

 Score =  549 bits (1414), Expect = e-154
 Identities = 288/372 (77%), Positives = 322/372 (86%), Gaps = 1/372 (0%)
 Frame = -3

Query: 1114 MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNF 935
            MTDGLLLREALLDP+LS+YSVIIVDEAHERT+HTDVL+GLLKNVQ ARS S++  + LN 
Sbjct: 134  MTDGLLLREALLDPFLSRYSVIIVDEAHERTIHTDVLLGLLKNVQNARSRSIN--KCLNI 191

Query: 934  GNKNVNSFVLLEKENCQSSSFLRKDRQGKNAP-LKLIIMSASLDARTFSEYFGGAKAVHI 758
             N   N   LL++EN  +   + K  QG   P LKLIIMSASLDAR FSEYFGGA++V+I
Sbjct: 192  ENTEANYGKLLKRENDANCVSILKRCQGVKFPSLKLIIMSASLDARGFSEYFGGARSVYI 251

Query: 757  QGRQFPVDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERL 578
            QGRQFPVDIFYT   E DYVDAA+ITIFQ+HL EGPGDILVFLTGQEEIESVERL+ ERL
Sbjct: 252  QGRQFPVDIFYTHHAEPDYVDAALITIFQIHLEEGPGDILVFLTGQEEIESVERLVQERL 311

Query: 577  TKLPEGSQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDP 398
             +LPEGSQ LL VPIF++LPSEQQMK F PAPAG RKVILATNIAETSVTIPGIKYVIDP
Sbjct: 312  RQLPEGSQKLLTVPIFSSLPSEQQMKAFMPAPAGFRKVILATNIAETSVTIPGIKYVIDP 371

Query: 397  GFVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMP 218
            G VKAR+Y+   G+ESL +V TSK+QALQRSGRAGRE PGKCFRLYPE+EF +L DST P
Sbjct: 372  GVVKARTYNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPESEFGQLADSTEP 431

Query: 217  EIKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLFLLGALTDDCQLSDPVG 38
            EIKRCNLSNVILQLKALGVDDI+GFDF+EKPSR+AI+KSLEQLFLLGA+TDD +LSDP+G
Sbjct: 432  EIKRCNLSNVILQLKALGVDDIIGFDFLEKPSRMAIVKSLEQLFLLGAITDDSKLSDPIG 491

Query: 37   RQMARLPLDPVY 2
             QMARLPLDPVY
Sbjct: 492  HQMARLPLDPVY 503


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
            putative [Ricinus communis]
          Length = 690

 Score =  547 bits (1410), Expect = e-153
 Identities = 281/371 (75%), Positives = 311/371 (83%)
 Frame = -3

Query: 1114 MTDGLLLREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNF 935
            MTDGLLLREALLDPYLS+YSVII+DEAHERTVHTDVL+GLLKNVQ ARS S+S+ + ++ 
Sbjct: 131  MTDGLLLREALLDPYLSRYSVIIIDEAHERTVHTDVLLGLLKNVQYARSKSVSNQKTIDD 190

Query: 934  GNKNVNSFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQ 755
            G K                            PLKLIIMSASLDAR FSEYFGGA+AVHI+
Sbjct: 191  GRKL--------------------------PPLKLIIMSASLDARVFSEYFGGARAVHIE 224

Query: 754  GRQFPVDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLT 575
            GR   VDI YT+ PE DY+DAA++T+FQ+HL E PGD+LVFLTGQEEIESVERL+ E+L 
Sbjct: 225  GRLHQVDILYTVHPEKDYLDAALMTLFQIHLEEAPGDVLVFLTGQEEIESVERLVQEKLQ 284

Query: 574  KLPEGSQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPG 395
            +LPE  + LL VPIF++LPSEQQM+VF P P G RKVILATNIAETSVTIPGIKYVIDPG
Sbjct: 285  QLPEAKRKLLTVPIFSSLPSEQQMRVFMPTPPGHRKVILATNIAETSVTIPGIKYVIDPG 344

Query: 394  FVKARSYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPENEFEKLEDSTMPE 215
             VKARSYDP KGMESL+VVPTSK+QALQRSGRAGREGPGKCFRLYPE EFEKLEDST PE
Sbjct: 345  LVKARSYDPVKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPEREFEKLEDSTKPE 404

Query: 214  IKRCNLSNVILQLKALGVDDILGFDFIEKPSRVAIIKSLEQLFLLGALTDDCQLSDPVGR 35
            IKRCNLSNVILQLKALGVDDI+GFDFIEKPSR AIIKSLE LFLLGALTD+C+LSDPVG 
Sbjct: 405  IKRCNLSNVILQLKALGVDDIIGFDFIEKPSRAAIIKSLEHLFLLGALTDECKLSDPVGH 464

Query: 34   QMARLPLDPVY 2
            QMARLPLDP+Y
Sbjct: 465  QMARLPLDPIY 475


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