BLASTX nr result

ID: Glycyrrhiza24_contig00016503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016503
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                          117   1e-24
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   117   1e-24
ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    84   2e-14
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    69   4e-10

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 3/124 (2%)
 Frame = -1

Query: 371 WVSVPRLEFDGTFFE-NNTMDNEDH--EICSIITEVLLLHNGPVYKFTLEIPFQFSIRTE 201
           W+S P LEFD  FF+  +  D +DH  E+C IITEVLLLHNGP+ KFTL IP  F+I   
Sbjct: 51  WISFPWLEFDKDFFDLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFG 110

Query: 200 WLSKCILFLSTSGIKNLKLKFGCCGKGPYKVPSHIFSCQELTHFELYGFNLSVPPPNFCG 21
            + K ILFLS  G+K ++L        PY+VPSH FS Q+LTH  +  F L V PPNFCG
Sbjct: 111 CIVKWILFLSRKGVKFIQLASN--ESVPYRVPSHFFSFQKLTHVRICKFKLLV-PPNFCG 167

Query: 20  FKNL 9
           FK+L
Sbjct: 168 FKSL 171


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score =  117 bits (292), Expect = 1e-24
 Identities = 67/124 (54%), Positives = 82/124 (66%), Gaps = 3/124 (2%)
 Frame = -1

Query: 371 WVSVPRLEFDGTFFE-NNTMDNEDH--EICSIITEVLLLHNGPVYKFTLEIPFQFSIRTE 201
           W+S P LEFD  FF+  +  D +DH  E+C IITEVLLLHNGP+ KFTL IP  F+I   
Sbjct: 132 WISFPWLEFDKDFFDLYDLKDFKDHSPEVCIIITEVLLLHNGPINKFTLFIPSGFNIPFG 191

Query: 200 WLSKCILFLSTSGIKNLKLKFGCCGKGPYKVPSHIFSCQELTHFELYGFNLSVPPPNFCG 21
            + K ILFLS  G+K ++L        PY+VPSH FS Q+LTH  +  F L V PPNFCG
Sbjct: 192 CIVKWILFLSRKGVKFIQLASN--ESVPYRVPSHFFSFQKLTHVRICKFKLLV-PPNFCG 248

Query: 20  FKNL 9
           FK+L
Sbjct: 249 FKSL 252


>ref|XP_003630442.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355524464|gb|AET04918.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 380

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = -1

Query: 371 WVSVPRLEFDGTFFENNTMDNEDHEICSIITEVLLLHNGPVYKFTLEIPFQF-SIRTEWL 195
           W++VPRLEF   FF     D E  ++  IITEVL LHNGP+YKF L I   F   ++ +L
Sbjct: 51  WITVPRLEFCQDFF-CKYKDLEALDVSRIITEVLFLHNGPIYKFILFITSNFLGFKSGYL 109

Query: 194 SKCILFLSTSGIKNLKLKFGCCGKGPYKVPSHIFSCQELTH 72
            + ++F S  G+KN++L         Y++PSH+FSCQELTH
Sbjct: 110 IRWVMFSSRKGVKNIQLVND--RYYIYRMPSHLFSCQELTH 148


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
 Frame = -1

Query: 371 WVSVPRLEFDGTFFENNTMDNE--DHEICSIITEVLLLHNGPVYKFTLEIPFQFSIRTEW 198
           W  +P L FD       + D     + + +II  VLLLHNGP+YKF L    +  +    
Sbjct: 42  WSQIPHLVFDTQCASITSQDQTIAKNNLVNIIDNVLLLHNGPIYKFKLS--HRDLLGVSD 99

Query: 197 LSKCILFLSTSGIKNLKLKFGCCGKGP-YKVPSHIFSCQELTHFELYGFNLSVPPPNFCG 21
           + + IL LS    K   L+     KG  YK+PS +FS + LTH EL+   L  PPP F G
Sbjct: 100 IDRWILHLSRGSTKEFVLEI---WKGQRYKLPSCLFSFENLTHLELFNCLLK-PPPAFKG 155

Query: 20  FKNL 9
           F+NL
Sbjct: 156 FRNL 159


>ref|XP_002281901.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 416

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 45/124 (36%), Positives = 70/124 (56%), Gaps = 3/124 (2%)
 Frame = -1

Query: 371 WVSVPRLEFDGTFFENNTMDNE--DHEICSIITEVLLLHNGPVYKFTLEIPFQFSIRTEW 198
           WV++P L FD      ++ D     +++ +II  VLLLH GP++KF L    +  +    
Sbjct: 42  WVTLPYLVFDNQCVSISSQDQTLVKNKLVNIIDHVLLLHTGPIHKFRLS--HRDFLGGSD 99

Query: 197 LSKCILFLSTSGIKNLKLKFGCCGKGP-YKVPSHIFSCQELTHFELYGFNLSVPPPNFCG 21
           + + IL+LS + I+   L+     KG  YK+PS +++CQ L H EL+  +L  PPP F G
Sbjct: 100 IDRWILYLSRTPIREFILEIW---KGQHYKLPSCLYNCQSLIHLELFN-SLLKPPPTFKG 155

Query: 20  FKNL 9
           F +L
Sbjct: 156 FMSL 159


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