BLASTX nr result

ID: Glycyrrhiza24_contig00016500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016500
         (897 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003620292.1| Cotton fiber expressed protein [Medicago tru...   232   1e-58
ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula...   224   3e-56
ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791...   220   3e-55
ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|XP_002528226.1| hypothetical protein RCOM_0460020 [Ricinus c...   127   4e-27

>ref|XP_003620292.1| Cotton fiber expressed protein [Medicago truncatula]
           gi|357500045|ref|XP_003620311.1| Cotton fiber expressed
           protein [Medicago truncatula]
           gi|355495307|gb|AES76510.1| Cotton fiber expressed
           protein [Medicago truncatula]
           gi|355495326|gb|AES76529.1| Cotton fiber expressed
           protein [Medicago truncatula]
          Length = 316

 Score =  232 bits (591), Expect = 1e-58
 Identities = 114/151 (75%), Positives = 129/151 (85%), Gaps = 2/151 (1%)
 Frame = +1

Query: 109 VRDFGLSCNRFMTDPSPEKCINDYFLPDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKS 288
           V+DF L CN+F+ DPSPEKC NDY LPDSGDK DDD+LEATW+AIME Q KT KP LKKS
Sbjct: 167 VKDFRLFCNKFIDDPSPEKCCNDYNLPDSGDKGDDDSLEATWKAIMEAQEKTKKPHLKKS 226

Query: 289 DTWAVSARIAKAEPFRDNE--CGDEDDPVAWAQRELKKSETFNDRASLRREKSMSPEELN 462
            TW  +ARI KAEPFR+N   CG +DDPVAWAQRELKKSETFNDRASL+REKSMSPEELN
Sbjct: 227 GTW--TARIVKAEPFRNNGGFCGGDDDPVAWAQRELKKSETFNDRASLKREKSMSPEELN 284

Query: 463 RRAEAFIQKFNKQMKLQRLESYQRFIEMVNR 555
           +RAEAFI+KFN QMKLQR+ESY RF+++  R
Sbjct: 285 KRAEAFIKKFNNQMKLQRMESYHRFMKLNKR 315


>ref|XP_003620296.1| Fiber expressed protein [Medicago truncatula]
           gi|357500037|ref|XP_003620307.1| Fiber expressed protein
           [Medicago truncatula] gi|355495311|gb|AES76514.1| Fiber
           expressed protein [Medicago truncatula]
           gi|355495322|gb|AES76525.1| Fiber expressed protein
           [Medicago truncatula]
          Length = 331

 Score =  224 bits (570), Expect = 3e-56
 Identities = 115/154 (74%), Positives = 130/154 (84%), Gaps = 4/154 (2%)
 Frame = +1

Query: 109 VRDFGLSCNRFMTDPSPEKCINDYFLPDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKS 288
           V+DF L  N+F+TDP  EK  NDY  PDSGDK DDD+LEATW+AIMEGQ KT KP LKKS
Sbjct: 179 VKDFELFFNKFITDPIQEKRCNDYNSPDSGDKGDDDSLEATWKAIMEGQEKTKKPYLKKS 238

Query: 289 DTWAVSARIAKAEPFRDNE-CG---DEDDPVAWAQRELKKSETFNDRASLRREKSMSPEE 456
           DTW  +ARI KAEPFR+N  CG    +DDPVAWA+RELKKSETFNDRASL+REKSMSPEE
Sbjct: 239 DTW--TARIVKAEPFRNNGGCGFGSGDDDPVAWAERELKKSETFNDRASLKREKSMSPEE 296

Query: 457 LNRRAEAFIQKFNKQMKLQRLESYQRFIEMVNRG 558
           LN+RAEAFI+KFN QMKLQRLESYQRF+++VN G
Sbjct: 297 LNKRAEAFIKKFNNQMKLQRLESYQRFLKLVNPG 330


>ref|XP_003534104.1| PREDICTED: uncharacterized protein LOC100791218 [Glycine max]
          Length = 135

 Score =  220 bits (561), Expect = 3e-55
 Identities = 114/140 (81%), Positives = 119/140 (85%)
 Frame = +1

Query: 142 MTDPSPEKCINDYFLPDSGDKDDDDTLEATWRAIMEGQGKTMKPQLKKSDTWAVSARIAK 321
           M  P  E C NDYFLPDS   D DDTLEATWRAIMEGQGKTMKPQLKKSDTW   ARIAK
Sbjct: 1   MIRPLLENCTNDYFLPDS---DGDDTLEATWRAIMEGQGKTMKPQLKKSDTWG--ARIAK 55

Query: 322 AEPFRDNECGDEDDPVAWAQRELKKSETFNDRASLRREKSMSPEELNRRAEAFIQKFNKQ 501
           AEPF  N  G +DDPVAWAQ+ELKKS+TFNDRASLRR+KSMSPEELNRRAEAFI+K N Q
Sbjct: 56  AEPFHRNGEGGDDDPVAWAQKELKKSDTFNDRASLRRDKSMSPEELNRRAEAFIKKINNQ 115

Query: 502 MKLQRLESYQRFIEMVNRGV 561
           MKLQRLESYQRF EMVNRGV
Sbjct: 116 MKLQRLESYQRFREMVNRGV 135


>ref|XP_002329689.1| predicted protein [Populus trichocarpa] gi|222870597|gb|EEF07728.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  137 bits (345), Expect = 3e-30
 Identities = 80/159 (50%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
 Frame = +1

Query: 145 TDPSPEKCINDYFLPDSGDK--------------DDDDTLEATWRAIMEGQGKTMKPQLK 282
           TDPS + C  D  L DS  K              D  DTLE  W +IME QGKT   QL+
Sbjct: 167 TDPSKDPCPPDSCLTDSAKKQQKKMDMEPLTQEADQQDTLEDAWTSIMEKQGKTPTRQLR 226

Query: 283 KSDTWAVSARIAK-----AEPFRDNECGDEDDPVAWAQRELKKSETFNDRASLRREKSMS 447
           K  TW    ++ +             CGD+DDPV+WA+RELKKS+TFND  SLRREKSMS
Sbjct: 227 KIGTWDTPPKVLQKVNGIVTADGGGGCGDDDDPVSWARRELKKSDTFNDSVSLRREKSMS 286

Query: 448 PEELNRRAEAFIQKFNKQMKLQRLESYQRFIEM-VNRGV 561
            +ELNRR E FI+KFN +M+LQR ES QR  EM V+ GV
Sbjct: 287 QDELNRRVEEFIRKFNHEMRLQRQESEQRVREMNVHGGV 325


>ref|XP_002528226.1| hypothetical protein RCOM_0460020 [Ricinus communis]
           gi|223532362|gb|EEF34159.1| hypothetical protein
           RCOM_0460020 [Ricinus communis]
          Length = 328

 Score =  127 bits (319), Expect = 4e-27
 Identities = 63/112 (56%), Positives = 85/112 (75%), Gaps = 7/112 (6%)
 Frame = +1

Query: 202 KDDDDTLEATWRAIMEGQGKTMKPQLKKSDTWAVSARIAKA-------EPFRDNECGDED 360
           ++++DTLE TW+ IMEG+GK  + +LKKS+TW    R+A         +   D++ GD +
Sbjct: 188 EEEEDTLEGTWKLIMEGKGKAAR-ELKKSETWGTPPRLAVVVQGDGDKDADDDDDGGDPN 246

Query: 361 DPVAWAQRELKKSETFNDRASLRREKSMSPEELNRRAEAFIQKFNKQMKLQR 516
           DPVAWA+REL+KS+TF+DR SLRREKSMS +ELNRRAEAFI KFN +M++QR
Sbjct: 247 DPVAWARRELRKSDTFSDRVSLRREKSMSHDELNRRAEAFINKFNHEMRMQR 298


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