BLASTX nr result
ID: Glycyrrhiza24_contig00016463
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00016463 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|2... 49 1e-10 ref|NP_196890.1| protein ELC-like protein [Arabidopsis thaliana]... 45 1e-09 ref|XP_002873631.1| hypothetical protein ARALYDRAFT_488210 [Arab... 45 2e-09 ref|XP_003537763.1| PREDICTED: protein ELC-like [Glycine max] 65 7e-09 ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|3555083... 64 2e-08 >ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|222846433|gb|EEE83980.1| predicted protein [Populus trichocarpa] Length = 380 Score = 48.9 bits (115), Expect(2) = 1e-10 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%) Frame = -2 Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177 N IN L+ VHGD+ LRKTRE+ LF QAVL++REE++ KG Sbjct: 210 NVINKLVENVHGDMLLLRKTRESEMENLFSAQAVLRRREEEINKG 254 Score = 41.6 bits (96), Expect(2) = 1e-10 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQR-RPNPNPN 307 NWIYP +FG DPPL+SQR RP+PNP+ Sbjct: 133 NWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPS 170 >ref|NP_196890.1| protein ELC-like protein [Arabidopsis thaliana] gi|75170327|sp|Q9FFY6.1|ELCL_ARATH RecName: Full=Protein ELC-like; AltName: Full=ESCRT-I complex subunit VPS23 homolog 2; AltName: Full=Vacuolar protein sorting-associated protein 23 homolog 2 gi|10177652|dbj|BAB11114.1| unnamed protein product [Arabidopsis thaliana] gi|332004568|gb|AED91951.1| protein ELC-like protein [Arabidopsis thaliana] Length = 368 Score = 45.4 bits (106), Expect(2) = 1e-09 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%) Frame = -2 Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177 NAIN ++ MVHGD+ +R RE GL LQ+ LK+REE++ G Sbjct: 195 NAINRIVEMVHGDIVLMRSAREVETEGLLSLQSDLKRREEEINNG 239 Score = 42.0 bits (97), Expect(2) = 1e-09 Identities = 18/37 (48%), Positives = 19/37 (51%) Frame = -1 Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307 NWIYP F DPPLYSQRRP P P+ Sbjct: 133 NWIYPSSNLVDLASHLSAAFSRDPPLYSQRRPPPQPS 169 >ref|XP_002873631.1| hypothetical protein ARALYDRAFT_488210 [Arabidopsis lyrata subsp. lyrata] gi|297319468|gb|EFH49890.1| hypothetical protein ARALYDRAFT_488210 [Arabidopsis lyrata subsp. lyrata] Length = 368 Score = 45.1 bits (105), Expect(2) = 2e-09 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%) Frame = -2 Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177 NAIN ++ MVHGD+ +R RE GL LQ+ LK+REE++ G Sbjct: 195 NAINKIVEMVHGDLVLMRSAREVETEGLLSLQSGLKRREEEINNG 239 Score = 41.6 bits (96), Expect(2) = 2e-09 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -1 Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307 NW+YP F DPPLYSQRRP P P+ Sbjct: 133 NWVYPSSNLVDLASHLSAAFSRDPPLYSQRRPPPQPS 169 >ref|XP_003537763.1| PREDICTED: protein ELC-like [Glycine max] Length = 415 Score = 64.7 bits (156), Expect = 7e-09 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 3/53 (5%) Frame = -2 Query: 326 DPTPTLIPNAINSLMVMVHGDVAALRKTRE---AGLFGLQAVLKQREEQLGKG 177 DP+ NAIN L+ MVHGDVAALRKTRE GLF LQ VLKQREE L +G Sbjct: 233 DPSEVFKRNAINKLVEMVHGDVAALRKTREDEMEGLFSLQGVLKQREESLNRG 285 >ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|355508322|gb|AES89464.1| Protein ELC [Medicago truncatula] Length = 411 Score = 63.5 bits (153), Expect = 2e-08 Identities = 35/53 (66%), Positives = 36/53 (67%), Gaps = 3/53 (5%) Frame = -2 Query: 326 DPTPTLIPNAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177 DPT NAIN L+ MVH DV ALRKTRE GLFGLQ VLKQREE L G Sbjct: 229 DPTEVFRRNAINKLVEMVHNDVTALRKTREGEMEGLFGLQGVLKQREEVLNNG 281 Score = 54.7 bits (130), Expect = 8e-06 Identities = 23/38 (60%), Positives = 24/38 (63%) Frame = -1 Query: 420 HNWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307 HNWIYP +FG DPPLYSQRRPNPNPN Sbjct: 131 HNWIYPSSNLVDLVLALSLIFGRDPPLYSQRRPNPNPN 168