BLASTX nr result

ID: Glycyrrhiza24_contig00016463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016463
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|2...    49   1e-10
ref|NP_196890.1| protein ELC-like protein [Arabidopsis thaliana]...    45   1e-09
ref|XP_002873631.1| hypothetical protein ARALYDRAFT_488210 [Arab...    45   2e-09
ref|XP_003537763.1| PREDICTED: protein ELC-like [Glycine max]          65   7e-09
ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|3555083...    64   2e-08

>ref|XP_002299175.1| predicted protein [Populus trichocarpa] gi|222846433|gb|EEE83980.1|
           predicted protein [Populus trichocarpa]
          Length = 380

 Score = 48.9 bits (115), Expect(2) = 1e-10
 Identities = 25/45 (55%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
 Frame = -2

Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177
           N IN L+  VHGD+  LRKTRE+    LF  QAVL++REE++ KG
Sbjct: 210 NVINKLVENVHGDMLLLRKTRESEMENLFSAQAVLRRREEEINKG 254



 Score = 41.6 bits (96), Expect(2) = 1e-10
 Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -1

Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQR-RPNPNPN 307
           NWIYP             +FG DPPL+SQR RP+PNP+
Sbjct: 133 NWIYPSSNLVDLARELSMIFGRDPPLFSQRPRPSPNPS 170


>ref|NP_196890.1| protein ELC-like protein [Arabidopsis thaliana]
           gi|75170327|sp|Q9FFY6.1|ELCL_ARATH RecName: Full=Protein
           ELC-like; AltName: Full=ESCRT-I complex subunit VPS23
           homolog 2; AltName: Full=Vacuolar protein
           sorting-associated protein 23 homolog 2
           gi|10177652|dbj|BAB11114.1| unnamed protein product
           [Arabidopsis thaliana] gi|332004568|gb|AED91951.1|
           protein ELC-like protein [Arabidopsis thaliana]
          Length = 368

 Score = 45.4 bits (106), Expect(2) = 1e-09
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -2

Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177
           NAIN ++ MVHGD+  +R  RE    GL  LQ+ LK+REE++  G
Sbjct: 195 NAINRIVEMVHGDIVLMRSAREVETEGLLSLQSDLKRREEEINNG 239



 Score = 42.0 bits (97), Expect(2) = 1e-09
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -1

Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307
           NWIYP              F  DPPLYSQRRP P P+
Sbjct: 133 NWIYPSSNLVDLASHLSAAFSRDPPLYSQRRPPPQPS 169


>ref|XP_002873631.1| hypothetical protein ARALYDRAFT_488210 [Arabidopsis lyrata subsp.
           lyrata] gi|297319468|gb|EFH49890.1| hypothetical protein
           ARALYDRAFT_488210 [Arabidopsis lyrata subsp. lyrata]
          Length = 368

 Score = 45.1 bits (105), Expect(2) = 2e-09
 Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
 Frame = -2

Query: 302 NAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177
           NAIN ++ MVHGD+  +R  RE    GL  LQ+ LK+REE++  G
Sbjct: 195 NAINKIVEMVHGDLVLMRSAREVETEGLLSLQSGLKRREEEINNG 239



 Score = 41.6 bits (96), Expect(2) = 2e-09
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -1

Query: 417 NWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307
           NW+YP              F  DPPLYSQRRP P P+
Sbjct: 133 NWVYPSSNLVDLASHLSAAFSRDPPLYSQRRPPPQPS 169


>ref|XP_003537763.1| PREDICTED: protein ELC-like [Glycine max]
          Length = 415

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 35/53 (66%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = -2

Query: 326 DPTPTLIPNAINSLMVMVHGDVAALRKTRE---AGLFGLQAVLKQREEQLGKG 177
           DP+     NAIN L+ MVHGDVAALRKTRE    GLF LQ VLKQREE L +G
Sbjct: 233 DPSEVFKRNAINKLVEMVHGDVAALRKTREDEMEGLFSLQGVLKQREESLNRG 285


>ref|XP_003607267.1| Protein ELC [Medicago truncatula] gi|355508322|gb|AES89464.1|
           Protein ELC [Medicago truncatula]
          Length = 411

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 35/53 (66%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
 Frame = -2

Query: 326 DPTPTLIPNAINSLMVMVHGDVAALRKTREA---GLFGLQAVLKQREEQLGKG 177
           DPT     NAIN L+ MVH DV ALRKTRE    GLFGLQ VLKQREE L  G
Sbjct: 229 DPTEVFRRNAINKLVEMVHNDVTALRKTREGEMEGLFGLQGVLKQREEVLNNG 281



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/38 (60%), Positives = 24/38 (63%)
 Frame = -1

Query: 420 HNWIYPXXXXXXXXXXXXXLFGHDPPLYSQRRPNPNPN 307
           HNWIYP             +FG DPPLYSQRRPNPNPN
Sbjct: 131 HNWIYPSSNLVDLVLALSLIFGRDPPLYSQRRPNPNPN 168


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