BLASTX nr result

ID: Glycyrrhiza24_contig00016440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016440
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782...   191   4e-47
ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781...   184   5e-45
ref|XP_003601606.1| Mediator of RNA polymerase II transcription ...   178   5e-43
ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263...   142   3e-32
emb|CBI16537.3| unnamed protein product [Vitis vinifera]              142   3e-32

>ref|XP_003551268.1| PREDICTED: uncharacterized protein LOC100782017 [Glycine max]
          Length = 1920

 Score =  191 bits (486), Expect = 4e-47
 Identities = 96/108 (88%), Positives = 100/108 (92%)
 Frame = +1

Query: 1   VFSKFHQFQSEEPFRRGQPAVEFAFSATEEAIFIHVIVSSKNIRALSTGDLEKLLKHSTE 180
           VFSKFHQFQ EE FRRGQPAVEF F+ATEEAIFIHVIVSSK+IR LST DLEK+LKHS E
Sbjct: 151 VFSKFHQFQREEIFRRGQPAVEFVFAATEEAIFIHVIVSSKHIRMLSTADLEKVLKHSME 210

Query: 181 STYRLPVIVSPHGIRGSLTGCSSSDLVRQSYFSSAKFRVSNGIIGLPY 324
           STYRLPVIVSPHGIRGSLTGCS SDLV+QSYFSS KFRVSNGIIGLPY
Sbjct: 211 STYRLPVIVSPHGIRGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPY 258


>ref|XP_003538518.1| PREDICTED: uncharacterized protein LOC100781873 [Glycine max]
          Length = 1918

 Score =  184 bits (468), Expect = 5e-45
 Identities = 93/108 (86%), Positives = 98/108 (90%)
 Frame = +1

Query: 1   VFSKFHQFQSEEPFRRGQPAVEFAFSATEEAIFIHVIVSSKNIRALSTGDLEKLLKHSTE 180
           VFSKFHQFQ EE FRRGQPAVEF F+ATEEAIFIHVIVSSK+IR LST DLEK+L+HS E
Sbjct: 151 VFSKFHQFQREELFRRGQPAVEFVFAATEEAIFIHVIVSSKHIRMLSTADLEKVLQHSME 210

Query: 181 STYRLPVIVSPHGIRGSLTGCSSSDLVRQSYFSSAKFRVSNGIIGLPY 324
            TYRLPVIVSPHGI GSLTGCS SDLV+QSYFSS KFRVSNGIIGLPY
Sbjct: 211 FTYRLPVIVSPHGICGSLTGCSPSDLVKQSYFSSTKFRVSNGIIGLPY 258


>ref|XP_003601606.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355490654|gb|AES71857.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 2052

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/109 (84%), Positives = 97/109 (88%), Gaps = 1/109 (0%)
 Frame = +1

Query: 1   VFSKFHQFQSEEPFRRGQPAVEFAFSATEEAIFIHVIVSSKNIRALSTGDLEKLLKHSTE 180
           VF K HQFQSEE  RRG PA EF F+ATEEAI IHVIVSSKNIR LS+GDLEKLLKHS E
Sbjct: 161 VFLKVHQFQSEELLRRGHPAFEFVFAATEEAILIHVIVSSKNIRMLSSGDLEKLLKHSME 220

Query: 181 STYRLPVIVSPHGIRGSLTGCSSSDLVRQSYF-SSAKFRVSNGIIGLPY 324
           +TY LPVIVSPHGIRG+LTGCSSSDLV+QSYF SSAKFRVSNGIIGLPY
Sbjct: 221 TTYTLPVIVSPHGIRGNLTGCSSSDLVKQSYFSSSAKFRVSNGIIGLPY 269


>ref|XP_002283658.2| PREDICTED: uncharacterized protein LOC100263945 [Vitis vinifera]
          Length = 1932

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/110 (65%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   VFSKFHQF-QSEEPFRRGQPAVEFAFSATEEAIFIHVIVSSKNIRALSTGDLEKLLKHST 177
           VFSK+H F QSEE FRRGQP +EF F+ATEEAIF+HVI+S+K++RAL++GD+E +LKHS+
Sbjct: 151 VFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVRALASGDMEMVLKHSS 210

Query: 178 ES-TYRLPVIVSPHGIRGSLTGCSSSDLVRQSYFSSAKFRVSNGIIGLPY 324
              +  LPVIVSPHG+ G  TGC  SDLV+Q YFS  KF+ SNG IGLPY
Sbjct: 211 NKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFS--KFKTSNGFIGLPY 258


>emb|CBI16537.3| unnamed protein product [Vitis vinifera]
          Length = 1812

 Score =  142 bits (358), Expect = 3e-32
 Identities = 72/110 (65%), Positives = 89/110 (80%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   VFSKFHQF-QSEEPFRRGQPAVEFAFSATEEAIFIHVIVSSKNIRALSTGDLEKLLKHST 177
           VFSK+H F QSEE FRRGQP +EF F+ATEEAIF+HVI+S+K++RAL++GD+E +LKHS+
Sbjct: 151 VFSKYHPFSQSEELFRRGQPTIEFIFAATEEAIFVHVIISAKHVRALASGDMEMVLKHSS 210

Query: 178 ES-TYRLPVIVSPHGIRGSLTGCSSSDLVRQSYFSSAKFRVSNGIIGLPY 324
              +  LPVIVSPHG+ G  TGC  SDLV+Q YFS  KF+ SNG IGLPY
Sbjct: 211 NKYSESLPVIVSPHGMLGRFTGCCPSDLVKQVYFS--KFKTSNGFIGLPY 258


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