BLASTX nr result

ID: Glycyrrhiza24_contig00016435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016435
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802...   378   e-102
ref|XP_003541303.1| PREDICTED: uncharacterized protein LOC100782...   356   5e-96
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   310   3e-82
ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4...   307   2e-81
gb|AFK44935.1| unknown [Medicago truncatula]                          303   3e-80

>ref|XP_003550619.1| PREDICTED: uncharacterized protein LOC100802173 [Glycine max]
          Length = 298

 Score =  378 bits (971), Expect = e-102
 Identities = 200/298 (67%), Positives = 234/298 (78%), Gaps = 4/298 (1%)
 Frame = -2

Query: 982 MDSESSKDAPGXXXXXXXXXXXXXXXXXKIEVKIEVVEDADAVQA--KDLLRRFNESE-- 815
           M S S KD PG                 K EVK EVV+DADA QA  ++LL+RFNE E  
Sbjct: 1   MASGSGKDGPGVPRKPKFKPRAPPRRVIKQEVKAEVVDDADAEQAAKENLLKRFNERESA 60

Query: 814 MKARNKVEKKVSASQIAFGYGGESTSIKSFRIPRGGSNTSGSQNLAFNGVREKEYKEPWD 635
           MKA+ KVEKKV ASQIAFGYGGESTS+KS+ IPRGGS+ + + + A +G +EKEY+EPWD
Sbjct: 61  MKAKYKVEKKVLASQIAFGYGGESTSMKSYGIPRGGSSININLSSASSGGKEKEYQEPWD 120

Query: 634 YYSNYPVTLPLRRLYSGNPEYLDEEEFGEAAESRTYDEDSSNSAMELGLLEENPESGMFL 455
           YYSNYPVTLPLRR YSGNP  LD+EEF EAA+SRTY+E++SNS M+LGLLEENPE+ MFL
Sbjct: 121 YYSNYPVTLPLRRPYSGNPALLDDEEFAEAAQSRTYEENASNSTMDLGLLEENPEASMFL 180

Query: 454 IHLPQTLPMIKQPATAGGQDVNENAKRPGGKKDAGKPCKLNDLPSGLMGKMLVYKSGAIK 275
           I+LP  LPMIKQ ATAG +DVNE +   GG K+  + C+LN+L SG MGKMLVYKSGAIK
Sbjct: 181 INLPTKLPMIKQSATAGDKDVNEKSIPHGGSKNVEELCELNELSSGFMGKMLVYKSGAIK 240

Query: 274 LKLGNTLYDVSSGMNCTFAQDVVAVNTAQKRCCTIGEITKQATITPNVDAIVECLADL 101
           LKLGNTLYDVSSGMNC  AQD+VAVNTAQK CCTIGEI+K  TITP+VDAI++ L+DL
Sbjct: 241 LKLGNTLYDVSSGMNCACAQDLVAVNTAQKHCCTIGEISKHVTITPDVDAIIDNLSDL 298


>ref|XP_003541303.1| PREDICTED: uncharacterized protein LOC100782982 [Glycine max]
          Length = 302

 Score =  356 bits (913), Expect = 5e-96
 Identities = 190/302 (62%), Positives = 227/302 (75%), Gaps = 8/302 (2%)
 Frame = -2

Query: 982 MDSESSKDAPGXXXXXXXXXXXXXXXXXKIEVKIEVVED----ADAVQA--KDLLRRFNE 821
           M SES KD  G                 K EVK EV +D    ADA  A  ++LL+RF+E
Sbjct: 1   MASESGKDGAGVPRKLKFKPRAPPRRVIKQEVKAEVADDVDVDADAEHAAKENLLKRFHE 60

Query: 820 SE--MKARNKVEKKVSASQIAFGYGGESTSIKSFRIPRGGSNTSGSQNLAFNGVREKEYK 647
            E  +KA+ KVEKKV ASQIAFGYGGESTS+KS+ IPRGGS+ + +Q+ A NG +EKEY+
Sbjct: 61  RESAVKAKYKVEKKVLASQIAFGYGGESTSMKSYGIPRGGSSININQSSASNGAKEKEYQ 120

Query: 646 EPWDYYSNYPVTLPLRRLYSGNPEYLDEEEFGEAAESRTYDEDSSNSAMELGLLEENPES 467
           EPWDY SNYPVTLPLRR YSGNP  LD++EFGEAAE R YDE++SNSAMEL LLE NPE+
Sbjct: 121 EPWDYDSNYPVTLPLRRPYSGNPALLDDQEFGEAAEPRAYDENASNSAMELDLLEHNPEA 180

Query: 466 GMFLIHLPQTLPMIKQPATAGGQDVNENAKRPGGKKDAGKPCKLNDLPSGLMGKMLVYKS 287
            MF I+LP  LPMIKQ ATAG  DVN  ++  GG K+  + C+LN+L SG MGKMLVYKS
Sbjct: 181 SMFFINLPTKLPMIKQSATAGSSDVNVKSRPHGGSKNVEELCELNELSSGFMGKMLVYKS 240

Query: 286 GAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQKRCCTIGEITKQATITPNVDAIVECLA 107
           GAIKLKLG+TLYDVSSGM C  AQD+VA+NTAQK CCTIGEI+K+ +ITP++DAI++ L 
Sbjct: 241 GAIKLKLGDTLYDVSSGMKCACAQDLVAINTAQKHCCTIGEISKRVSITPDIDAIIDNLP 300

Query: 106 DL 101
           DL
Sbjct: 301 DL 302


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  310 bits (795), Expect = 3e-82
 Identities = 158/269 (58%), Positives = 195/269 (72%), Gaps = 7/269 (2%)
 Frame = -2

Query: 886 KIEVVEDADAVQAKDLLRRFNESEMKARNKVEKKVSASQIAFGYGGESTSIKSFRIPRGG 707
           K EV ED DA QA +L+R FNE+ MK + K EKK++ +Q+AFGYGG S SI+S+  PRG 
Sbjct: 34  KSEVAEDDDAAQANELMRHFNEASMKGKPKAEKKLAPTQVAFGYGGASASIRSYGTPRGA 93

Query: 706 SNTSGSQNLAFNG-------VREKEYKEPWDYYSNYPVTLPLRRLYSGNPEYLDEEEFGE 548
           +N+S  Q+ A  G          KEYKEPWDYY+ YPVTLPLRR YSGNPE LDEEEFGE
Sbjct: 94  TNSSRYQDPASGGGLYGSGLSDHKEYKEPWDYYTYYPVTLPLRRPYSGNPELLDEEEFGE 153

Query: 547 AAESRTYDEDSSNSAMELGLLEENPESGMFLIHLPQTLPMIKQPATAGGQDVNENAKRPG 368
           A+ES  YDE+S+N AMELGL++EN E+ M  + LP T+PMIKQ ATA   +V EN     
Sbjct: 154 ASESTAYDENSTNPAMELGLMDENQEASMLFLQLPATMPMIKQAATA---EVKEN----- 205

Query: 367 GKKDAGKPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQ 188
                 K C+L +LPSG MGKMLVYKSGAIKLKLG+TLYDVS G++C FAQDVVA+NT  
Sbjct: 206 ------KTCRLEELPSGFMGKMLVYKSGAIKLKLGDTLYDVSPGLDCVFAQDVVAINTED 259

Query: 187 KRCCTIGEITKQATITPNVDAIVECLADL 101
           K CC +GE+ K+A +TP+VD+ +  + DL
Sbjct: 260 KCCCVLGELKKRAVVTPDVDSALSSMDDL 288


>ref|XP_003590974.1| DNA-directed RNA polymerase III subunit RPC4 [Medicago truncatula]
           gi|355480022|gb|AES61225.1| DNA-directed RNA polymerase
           III subunit RPC4 [Medicago truncatula]
          Length = 288

 Score =  307 bits (787), Expect = 2e-81
 Identities = 162/268 (60%), Positives = 201/268 (75%), Gaps = 3/268 (1%)
 Frame = -2

Query: 895 IEVKIEVVEDADAVQAK---DLLRRFNESEMKARNKVEKKVSASQIAFGYGGESTSIKSF 725
           +EVK EV+E+ +   +K   DLL+R NE+ M  R K EKKV  SQIAFG GG+ST +KS+
Sbjct: 29  VEVKSEVIEEDNKDVSKVTMDLLQRHNENAMNRRMKHEKKVLPSQIAFGAGGQSTYLKSY 88

Query: 724 RIPRGGSNTSGSQNLAFNGVREKEYKEPWDYYSNYPVTLPLRRLYSGNPEYLDEEEFGEA 545
              +GGS    S+N AF GV EKEYKEPW+  + YP+  PLR+ YSGNPE LDE+EFGE 
Sbjct: 89  GT-KGGSK---SENSAFYGVTEKEYKEPWELDTEYPIVHPLRKPYSGNPEKLDEKEFGET 144

Query: 544 AESRTYDEDSSNSAMELGLLEENPESGMFLIHLPQTLPMIKQPATAGGQDVNENAKRPGG 365
           AESRTYDE +++SA+EL LLEENPE+  F + LP  +PMIK+P  A G+D     KRPGG
Sbjct: 145 AESRTYDESAASSAVELDLLEENPEASAFFMKLPPVIPMIKKP-DADGKD-----KRPGG 198

Query: 364 KKDAGKPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQK 185
            + A K C+LNDLP GL+GKMLVYKSG +KLKLGNTLYDVSSGMNC FAQ+  A+NTAQK
Sbjct: 199 YRGAAKLCRLNDLPPGLIGKMLVYKSGKVKLKLGNTLYDVSSGMNCIFAQEFAAINTAQK 258

Query: 184 RCCTIGEITKQATITPNVDAIVECLADL 101
            C  +GEI K AT+TP++DA ++CL+DL
Sbjct: 259 FCSALGEINKFATVTPDIDAALDCLSDL 286


>gb|AFK44935.1| unknown [Medicago truncatula]
          Length = 288

 Score =  303 bits (777), Expect = 3e-80
 Identities = 161/268 (60%), Positives = 200/268 (74%), Gaps = 3/268 (1%)
 Frame = -2

Query: 895 IEVKIEVVEDADAVQAK---DLLRRFNESEMKARNKVEKKVSASQIAFGYGGESTSIKSF 725
           +EVK EV+E+ +   +K   DLL+R NE+ M  R K EKKV  SQIAFG GG+ST +KS+
Sbjct: 29  VEVKSEVIEEDNKDVSKVTMDLLQRHNENAMNRRMKHEKKVLPSQIAFGAGGQSTYLKSY 88

Query: 724 RIPRGGSNTSGSQNLAFNGVREKEYKEPWDYYSNYPVTLPLRRLYSGNPEYLDEEEFGEA 545
              +GGS    S+N AF GV EKEYKEPW+  + YP+  PLR+ YSGNPE LDE+EFGE 
Sbjct: 89  GT-KGGSK---SENSAFYGVTEKEYKEPWELDTEYPIVHPLRKPYSGNPEKLDEKEFGET 144

Query: 544 AESRTYDEDSSNSAMELGLLEENPESGMFLIHLPQTLPMIKQPATAGGQDVNENAKRPGG 365
           AESRTYDE +++SA+EL LLEENPE+  F + LP  +PMIK+P  A G+D     KRPGG
Sbjct: 145 AESRTYDESAASSAVELDLLEENPEASAFFMKLPPVIPMIKKP-DADGKD-----KRPGG 198

Query: 364 KKDAGKPCKLNDLPSGLMGKMLVYKSGAIKLKLGNTLYDVSSGMNCTFAQDVVAVNTAQK 185
            + A K C+LNDLP GL+GKMLVYKSG +KLKLGNTLYDVSSGMNC FAQ+  A+NTAQK
Sbjct: 199 YRGAAKLCRLNDLPPGLIGKMLVYKSGKVKLKLGNTLYDVSSGMNCIFAQEFAAINTAQK 258

Query: 184 RCCTIGEITKQATITPNVDAIVECLADL 101
            C  +GEI K AT+T ++DA ++CL+DL
Sbjct: 259 FCSALGEINKFATVTLDIDAALDCLSDL 286


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