BLASTX nr result

ID: Glycyrrhiza24_contig00016398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016398
         (1306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536479.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   520   e-145
ref|XP_003556087.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   516   e-144
ref|XP_003592304.1| F-box family protein [Medicago truncatula] g...   489   e-136
ref|XP_003548217.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   452   e-125
ref|XP_003534015.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   452   e-125

>ref|XP_003536479.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 293

 Score =  520 bits (1340), Expect = e-145
 Identities = 247/278 (88%), Positives = 260/278 (93%), Gaps = 6/278 (2%)
 Frame = +2

Query: 269  GGGS------SSKPGLGDIPESCISSLLMNLDPPDICKLARVNRAFHGASSADFVWESKL 430
            GGGS       S+PGLGDIPESCISSL MNLDPPDICKLARVNRAFH ASSADFVWESKL
Sbjct: 15   GGGSISSSSRDSRPGLGDIPESCISSLFMNLDPPDICKLARVNRAFHRASSADFVWESKL 74

Query: 431  PPCYKFLVNKVLGEEHLASMTKKEIYTKLCLPSRFDGGTKEIWLDKCSGQVCLFMSSKSL 610
            PP YKFL NKVLGEE++A+MTKKEIY KLCLP+RFDGGTKE+WLDKCSGQVCLFMSSKSL
Sbjct: 75   PPSYKFLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSL 134

Query: 611  KITGIDDRRYWSYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSMIFRLQLGKAS 790
            KITGIDDRRYW+YIPTEESRF++VAYLQQMWWVEVVGELEF FPVGSYS+IFRLQLGKAS
Sbjct: 135  KITGIDDRRYWNYIPTEESRFQSVAYLQQMWWVEVVGELEFEFPVGSYSLIFRLQLGKAS 194

Query: 791  KRLGRRVCNVDQVHGWDIKPVRFQLFTSDGQRSLSECYLNGPGEWVYYHVGDFVVEKPNE 970
            KRLGRRVCNVDQVHGWDIKP+RFQL TSDGQ SLSECYL GPGEWVYYHVGDFVVEKPNE
Sbjct: 195  KRLGRRVCNVDQVHGWDIKPIRFQLSTSDGQLSLSECYLCGPGEWVYYHVGDFVVEKPNE 254

Query: 971  PIKIKFSLAQIDCTHTKGGLCIDGAIICPTEFRERLKQ 1084
            PI IKFSLAQIDCTHTKGGLC+D AIICPTEF+ERLKQ
Sbjct: 255  PINIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQ 292


>ref|XP_003556087.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 293

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/285 (85%), Positives = 261/285 (91%), Gaps = 6/285 (2%)
 Frame = +2

Query: 248  TREMKDIGGGS------SSKPGLGDIPESCISSLLMNLDPPDICKLARVNRAFHGASSAD 409
            T + +  GGGS       S+PGLGD PESCISSL MNLDPPDICKLARVNRAFH ASSAD
Sbjct: 8    TNKAEKDGGGSISSSSRDSRPGLGDFPESCISSLFMNLDPPDICKLARVNRAFHRASSAD 67

Query: 410  FVWESKLPPCYKFLVNKVLGEEHLASMTKKEIYTKLCLPSRFDGGTKEIWLDKCSGQVCL 589
            FVWESKLPP YKFL NKVLGEE++A+MTKKEIY KLCLP+RFDGGTKE+WLDKCSGQVCL
Sbjct: 68   FVWESKLPPSYKFLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCL 127

Query: 590  FMSSKSLKITGIDDRRYWSYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSMIFR 769
            FMSSKSLKITGIDDRRYW+YIPTEESRF++VAYLQQMWWVEVVGELEF FPVGSYS++FR
Sbjct: 128  FMSSKSLKITGIDDRRYWNYIPTEESRFQSVAYLQQMWWVEVVGELEFEFPVGSYSLVFR 187

Query: 770  LQLGKASKRLGRRVCNVDQVHGWDIKPVRFQLFTSDGQRSLSECYLNGPGEWVYYHVGDF 949
            LQLGKASKRLGRRVCNVDQVHGWDIKPVRFQL TSDGQ SLSECYL GPGEWVYY+VGDF
Sbjct: 188  LQLGKASKRLGRRVCNVDQVHGWDIKPVRFQLSTSDGQSSLSECYLRGPGEWVYYNVGDF 247

Query: 950  VVEKPNEPIKIKFSLAQIDCTHTKGGLCIDGAIICPTEFRERLKQ 1084
            VVEKP EPI IKFSLAQIDCTHTKGGLC+D AIICPTEF+ERLKQ
Sbjct: 248  VVEKPKEPINIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQ 292


>ref|XP_003592304.1| F-box family protein [Medicago truncatula]
            gi|355481352|gb|AES62555.1| F-box family protein
            [Medicago truncatula]
          Length = 291

 Score =  489 bits (1259), Expect = e-136
 Identities = 232/269 (86%), Positives = 251/269 (93%)
 Frame = +2

Query: 278  SSSKPGLGDIPESCISSLLMNLDPPDICKLARVNRAFHGASSADFVWESKLPPCYKFLVN 457
            SSSK GLGDIPESCISS+LM+LDP DICKLARVNRAFH ASSADFVWESKLP CYKFL N
Sbjct: 22   SSSKTGLGDIPESCISSILMHLDPHDICKLARVNRAFHRASSADFVWESKLPSCYKFLAN 81

Query: 458  KVLGEEHLASMTKKEIYTKLCLPSRFDGGTKEIWLDKCSGQVCLFMSSKSLKITGIDDRR 637
            K LGEE+L++M+KK++YTKLC P+RFDGGTKE+ LDK SGQVCLFMSSKSLKITGIDDRR
Sbjct: 82   KFLGEENLSTMSKKDVYTKLCQPNRFDGGTKEVLLDKYSGQVCLFMSSKSLKITGIDDRR 141

Query: 638  YWSYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSMIFRLQLGKASKRLGRRVCN 817
            YW YIPTEESRFKNVAYLQQMWWVEV+GELEFVFPVGSYS+ FRLQLGK+SKRLGRRVCN
Sbjct: 142  YWIYIPTEESRFKNVAYLQQMWWVEVIGELEFVFPVGSYSITFRLQLGKSSKRLGRRVCN 201

Query: 818  VDQVHGWDIKPVRFQLFTSDGQRSLSECYLNGPGEWVYYHVGDFVVEKPNEPIKIKFSLA 997
             DQVHGWDIKPVRFQL TSDGQRS+SECYL+ PG+W YYHVGDF+V KPN+PIKIKFSLA
Sbjct: 202  DDQVHGWDIKPVRFQLSTSDGQRSISECYLHEPGQWAYYHVGDFMVTKPNKPIKIKFSLA 261

Query: 998  QIDCTHTKGGLCIDGAIICPTEFRERLKQ 1084
            QIDCTHTKGGLCID AII PTEFRERLK+
Sbjct: 262  QIDCTHTKGGLCIDSAIIRPTEFRERLKK 290


>ref|XP_003548217.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 289

 Score =  452 bits (1164), Expect = e-125
 Identities = 211/283 (74%), Positives = 242/283 (85%), Gaps = 3/283 (1%)
 Frame = +2

Query: 248  TREMKDIGGGS---SSKPGLGDIPESCISSLLMNLDPPDICKLARVNRAFHGASSADFVW 418
            T  +++  GG+   S+K  L DIPE+CISS++M+ DP +IC LARVN+AFH ASSADFVW
Sbjct: 7    TTAIENDDGGTFSLSTKTTLDDIPENCISSMMMSFDPQEICTLARVNKAFHRASSADFVW 66

Query: 419  ESKLPPCYKFLVNKVLGEEHLASMTKKEIYTKLCLPSRFDGGTKEIWLDKCSGQVCLFMS 598
            ESKLPP YKFL+NKVLGE++L SMTKKEIY KLC P+ FDG  KE+WLD+  GQVC+F+S
Sbjct: 67   ESKLPPSYKFLLNKVLGEQNLGSMTKKEIYAKLCRPNFFDGANKEVWLDRSRGQVCMFIS 126

Query: 599  SKSLKITGIDDRRYWSYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSMIFRLQL 778
            SKS KITGIDDRRYW+ IPTEESRFK+VAYLQQMWWVEV+GELEF FP G+YS+ F+LQL
Sbjct: 127  SKSFKITGIDDRRYWNNIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQL 186

Query: 779  GKASKRLGRRVCNVDQVHGWDIKPVRFQLFTSDGQRSLSECYLNGPGEWVYYHVGDFVVE 958
            GK SKRLGRRVCN+DQVHGWDIKPVRFQL TSDGQRSLS+CYL G GEW +YHVGDF ++
Sbjct: 187  GKPSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGSGEWAHYHVGDFAID 246

Query: 959  KPNEPIKIKFSLAQIDCTHTKGGLCIDGAIICPTEFRERLKQF 1087
            KPN P  I FSLAQIDCTHTKGGLCIDG +ICP EF ERLKQF
Sbjct: 247  KPNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKEFTERLKQF 289


>ref|XP_003534015.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 289

 Score =  452 bits (1164), Expect = e-125
 Identities = 212/282 (75%), Positives = 239/282 (84%), Gaps = 2/282 (0%)
 Frame = +2

Query: 248  TREMKDIGG--GSSSKPGLGDIPESCISSLLMNLDPPDICKLARVNRAFHGASSADFVWE 421
            T    D GG    SS+  L DIPE+CISS++MN DP +IC LARVN+ FH ASSA+FVWE
Sbjct: 8    TATENDDGGTFSLSSETSLDDIPENCISSMMMNFDPQEICSLARVNKTFHRASSANFVWE 67

Query: 422  SKLPPCYKFLVNKVLGEEHLASMTKKEIYTKLCLPSRFDGGTKEIWLDKCSGQVCLFMSS 601
            SKLP  YKFL+NKVLGE++L SMTKKEIY KLC P+ FDGGTKE+WLD+ SGQVC+F+SS
Sbjct: 68   SKLPQNYKFLLNKVLGEQNLGSMTKKEIYAKLCQPNFFDGGTKEVWLDRSSGQVCMFISS 127

Query: 602  KSLKITGIDDRRYWSYIPTEESRFKNVAYLQQMWWVEVVGELEFVFPVGSYSMIFRLQLG 781
            KS KITGIDDRRYW+YIPTEESRFK+VAYLQQMWWVEV+GELEF FP G+YS+ F+LQLG
Sbjct: 128  KSFKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVIGELEFEFPKGNYSVFFKLQLG 187

Query: 782  KASKRLGRRVCNVDQVHGWDIKPVRFQLFTSDGQRSLSECYLNGPGEWVYYHVGDFVVEK 961
            K SKRLGRRVCN+DQVHGWDIKPVRFQL TSDGQRSLS+CYL G  EW YYHVGDF ++K
Sbjct: 188  KPSKRLGRRVCNLDQVHGWDIKPVRFQLSTSDGQRSLSQCYLRGSREWAYYHVGDFAIDK 247

Query: 962  PNEPIKIKFSLAQIDCTHTKGGLCIDGAIICPTEFRERLKQF 1087
            PN P  I FSLAQIDCTHTKGGLCIDG +ICP EF + LKQF
Sbjct: 248  PNGPTNINFSLAQIDCTHTKGGLCIDGVVICPKEFTQGLKQF 289


Top