BLASTX nr result

ID: Glycyrrhiza24_contig00016394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016394
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Gly...   112   2e-23
ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei...   112   2e-23
gb|ACU24466.1| unknown [Glycine max]                                   96   2e-18
ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata sub...    60   2e-07
ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Glycine max]
          Length = 424

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 174
           QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS
Sbjct: 365 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 422


>ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g03970-like
           [Glycine max]
          Length = 419

 Score =  112 bits (281), Expect = 2e-23
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = +1

Query: 1   QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 174
           QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS
Sbjct: 360 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 417


>gb|ACU24466.1| unknown [Glycine max]
          Length = 394

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 44/48 (91%), Positives = 46/48 (95%)
 Frame = +1

Query: 1   QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFL 144
           QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFL
Sbjct: 342 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFL 389


>ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297318963|gb|EFH49385.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/54 (53%), Positives = 34/54 (62%)
 Frame = +1

Query: 1   QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLS 162
           Q S SVFIR   +I + D ETK VE+V YQGR +   W+  KVVPYF   WP S
Sbjct: 293 QKSDSVFIRCEAHIFIYDTETKRVEVVQYQGRKSAFIWDYCKVVPYFRRTWPSS 346


>ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|222875232|gb|EEF12363.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = +1

Query: 1   QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSS 165
           +NS SV IR G +I L  L  + VE V Y GRG++ISW+ S+V PYF P WP SS
Sbjct: 344 RNSKSVCIRSGPDIFLLHLVNQKVEAVLYNGRGSSISWDFSRVAPYFRPDWPHSS 398


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