BLASTX nr result
ID: Glycyrrhiza24_contig00016394
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00016394 (415 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Gly... 112 2e-23 ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protei... 112 2e-23 gb|ACU24466.1| unknown [Glycine max] 96 2e-18 ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata sub... 60 2e-07 ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 >ref|XP_003554715.1| PREDICTED: F-box protein At5g03970-like [Glycine max] Length = 424 Score = 112 bits (281), Expect = 2e-23 Identities = 52/58 (89%), Positives = 55/58 (94%) Frame = +1 Query: 1 QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 174 QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS Sbjct: 365 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 422 >ref|XP_003521763.1| PREDICTED: LOW QUALITY PROTEIN: F-box protein At5g03970-like [Glycine max] Length = 419 Score = 112 bits (281), Expect = 2e-23 Identities = 52/58 (89%), Positives = 55/58 (94%) Frame = +1 Query: 1 QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSSSVS 174 QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFLPAWP +SSVS Sbjct: 360 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFLPAWPHTSSVS 417 >gb|ACU24466.1| unknown [Glycine max] Length = 394 Score = 96.3 bits (238), Expect = 2e-18 Identities = 44/48 (91%), Positives = 46/48 (95%) Frame = +1 Query: 1 QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFL 144 QNSTS+FIR GWNI+LCDLETKTVEIVNYQGRG TISWESSKVVPYFL Sbjct: 342 QNSTSIFIRSGWNILLCDLETKTVEIVNYQGRGGTISWESSKVVPYFL 389 >ref|XP_002873126.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297318963|gb|EFH49385.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 369 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/54 (53%), Positives = 34/54 (62%) Frame = +1 Query: 1 QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLS 162 Q S SVFIR +I + D ETK VE+V YQGR + W+ KVVPYF WP S Sbjct: 293 QKSDSVFIRCEAHIFIYDTETKRVEVVQYQGRKSAFIWDYCKVVPYFRRTWPSS 346 >ref|XP_002332007.1| predicted protein [Populus trichocarpa] gi|222875232|gb|EEF12363.1| predicted protein [Populus trichocarpa] Length = 407 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/55 (54%), Positives = 37/55 (67%) Frame = +1 Query: 1 QNSTSVFIRLGWNIILCDLETKTVEIVNYQGRGATISWESSKVVPYFLPAWPLSS 165 +NS SV IR G +I L L + VE V Y GRG++ISW+ S+V PYF P WP SS Sbjct: 344 RNSKSVCIRSGPDIFLLHLVNQKVEAVLYNGRGSSISWDFSRVAPYFRPDWPHSS 398