BLASTX nr result

ID: Glycyrrhiza24_contig00016342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016342
         (844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|3554921...   326   3e-87
ref|XP_003525909.1| PREDICTED: cyclin-D3-2-like [Glycine max]         318   1e-84
ref|XP_003523970.1| PREDICTED: cyclin-D3-1-like [Glycine max]         316   5e-84
dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]                       307   2e-81
emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]   286   4e-75

>ref|XP_003603091.1| Cyclin D3-1 [Medicago truncatula] gi|355492139|gb|AES73342.1|
           Cyclin D3-1 [Medicago truncatula]
           gi|388511523|gb|AFK43823.1| unknown [Medicago
           truncatula]
          Length = 348

 Score =  326 bits (836), Expect = 3e-87
 Identities = 176/248 (70%), Positives = 199/248 (80%), Gaps = 2/248 (0%)
 Frame = +3

Query: 105 NPKFLLETLYCSXXXXXXXXXXXXXXXXXLEDESYGNDSLISSTIINDTPPWLLQNDMFC 284
           NP  LL+TLYCS                  ++  Y N SL ++T IN T   LL+ DMF 
Sbjct: 7   NPILLLDTLYCSEEHWEEQ-----------DELEYDNVSL-NNTTINTTTCSLLETDMFW 54

Query: 285 DDEELTSLLTKEQHNPLCNCFQSNPGLEGARREAVKWILKVIAHYSFAALTAVLAVNYLD 464
           +DEEL SLL KEQ NPL    Q+NP LE ARRE+++WILKV AHYSF+ALT+VLAVNYLD
Sbjct: 55  EDEELKSLLNKEQQNPLYIFLQTNPVLETARRESIEWILKVNAHYSFSALTSVLAVNYLD 114

Query: 465 RFLFSFRFQNGKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKRMEI 644
           RFLFSFRFQN KPWMTQLAAVACLSLAAK+EET VPLLLDLQVE+SRYLFEAKTIK+MEI
Sbjct: 115 RFLFSFRFQNEKPWMTQLAAVACLSLAAKMEETHVPLLLDLQVEESRYLFEAKTIKKMEI 174

Query: 645 LVLSTLGWKMNPATPLSFLDYLIRRLGLRDP-FCWKFLTRCEGVLLSVIR-DSRFMSYLP 818
           L+LSTLGWKMNPATPLSF+D++IRRLGL+D   CW+FL RCEGVLLSVIR DS+FMSYLP
Sbjct: 175 LILSTLGWKMNPATPLSFIDFIIRRLGLKDHLICWEFLKRCEGVLLSVIRSDSKFMSYLP 234

Query: 819 SVLATATM 842
           SVLATATM
Sbjct: 235 SVLATATM 242


>ref|XP_003525909.1| PREDICTED: cyclin-D3-2-like [Glycine max]
          Length = 362

 Score =  318 bits (814), Expect = 1e-84
 Identities = 166/247 (67%), Positives = 193/247 (78%), Gaps = 1/247 (0%)
 Frame = +3

Query: 105 NPKFLLETLYCSXXXXXXXXXXXXXXXXXLEDESYGNDSLISSTIINDTPPWLLQNDMFC 284
           N K LL+TLYCS                   +E YG+    SS     +PP+LLQ+DMF 
Sbjct: 10  NRKSLLDTLYCSEA-----------------EEDYGHFLNNSSPA---SPPFLLQSDMFS 49

Query: 285 DDEELTSLLTKEQHNPLCNCFQSNPGLEGARREAVKWILKVIAHYSFAALTAVLAVNYLD 464
           D++ELTSLL KE HNPL  C Q+NP L+ ARREAV+W+LKV +HYSF+ALTAVL+VNY D
Sbjct: 50  DEQELTSLLGKEHHNPLSTCLQTNPALDFARREAVEWMLKVNSHYSFSALTAVLSVNYFD 109

Query: 465 RFLFSFRFQNGKPWMTQLAAVACLSLAAKVEETQVPLLLDL-QVEDSRYLFEAKTIKRME 641
           RFLFSFRFQN KPWM QLAAVACLS+AAKVEET VP L+DL QV++SRYLFEAKTIK+ME
Sbjct: 110 RFLFSFRFQNDKPWMVQLAAVACLSIAAKVEETHVPFLIDLQQVDESRYLFEAKTIKKME 169

Query: 642 ILVLSTLGWKMNPATPLSFLDYLIRRLGLRDPFCWKFLTRCEGVLLSVIRDSRFMSYLPS 821
           ILVLSTLGWKMNP TPLSFLDY  RRLG +D  CW+FL++ +GVLLS++ DSRFMSYLPS
Sbjct: 170 ILVLSTLGWKMNPPTPLSFLDYFTRRLGSKDHLCWEFLSKSQGVLLSLLGDSRFMSYLPS 229

Query: 822 VLATATM 842
           VLATATM
Sbjct: 230 VLATATM 236


>ref|XP_003523970.1| PREDICTED: cyclin-D3-1-like [Glycine max]
          Length = 349

 Score =  316 bits (809), Expect = 5e-84
 Identities = 174/255 (68%), Positives = 199/255 (78%), Gaps = 8/255 (3%)
 Frame = +3

Query: 102 NNPKFLLETLYCSXXXXXXXXXXXXXXXXXLEDESYGN-DSLISSTIINDTPP----WLL 266
           ++ K LL+TLYCS                   +E YGN +S  SST++N++P      LL
Sbjct: 4   HHQKSLLDTLYCSEEHWIGEGEFDQA------EEEYGNSNSNSSSTLVNNSPESSPHLLL 57

Query: 267 QNDMFCDDEELTSLLTKEQHNPLCNC-FQSNPGLEGARREAVKWILKVIAHYSFAALTAV 443
           ++DMF D++EL SLL KEQHNPL  C  QSNP LEGAR EAV+WILKV AHYSF+ALTAV
Sbjct: 58  ESDMFWDEQELASLLEKEQHNPLSTCCLQSNPALEGARIEAVEWILKVNAHYSFSALTAV 117

Query: 444 LAVNYLDRFLFSFRFQNG-KPWMTQLAAVACLSLAAKVEETQVPLLLDLQ-VEDSRYLFE 617
           LAVNY DRFLFSFRFQN  KPWMT+LAAVACLSLAAKV+ET VP L+DLQ VE+SRYLFE
Sbjct: 118 LAVNYFDRFLFSFRFQNDIKPWMTRLAAVACLSLAAKVDETHVPFLIDLQQVEESRYLFE 177

Query: 618 AKTIKRMEILVLSTLGWKMNPATPLSFLDYLIRRLGLRDPFCWKFLTRCEGVLLSVIRDS 797
           AKTIK+MEIL+LSTLGWKMNP T LSFLDY  RRLGL+D   W+FLT+ EGVLLS+I DS
Sbjct: 178 AKTIKKMEILILSTLGWKMNPPTSLSFLDYFTRRLGLKDHLFWEFLTKSEGVLLSLIGDS 237

Query: 798 RFMSYLPSVLATATM 842
           RFMSYLPSVLATATM
Sbjct: 238 RFMSYLPSVLATATM 252


>dbj|BAE80324.1| cyclin D3-1 [Camellia sinensis]
          Length = 371

 Score =  307 bits (786), Expect = 2e-81
 Identities = 158/246 (64%), Positives = 187/246 (76%)
 Frame = +3

Query: 105 NPKFLLETLYCSXXXXXXXXXXXXXXXXXLEDESYGNDSLISSTIINDTPPWLLQNDMFC 284
           N  F+L+ LYC                     +S   D   S  I++  PP LL+ D+F 
Sbjct: 18  NLPFVLDALYCQEQHLEGGETEDYF-------DSEEEDCHYSDNIVSPKPPQLLEQDLFW 70

Query: 285 DDEELTSLLTKEQHNPLCNCFQSNPGLEGARREAVKWILKVIAHYSFAALTAVLAVNYLD 464
           +DEELTSLL+KEQ NPL +  +++P L GARR AV+W+LKV AHYSF+ALTAVLAVNYLD
Sbjct: 71  EDEELTSLLSKEQENPLFHSLETDPSLGGARRAAVEWLLKVNAHYSFSALTAVLAVNYLD 130

Query: 465 RFLFSFRFQNGKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKRMEI 644
           RFLFSF FQ  KPWMTQLAAVACLSLAAKVEET+VPLLLDLQVEDSRY+FEAKTI+RME+
Sbjct: 131 RFLFSFHFQREKPWMTQLAAVACLSLAAKVEETEVPLLLDLQVEDSRYVFEAKTIQRMEM 190

Query: 645 LVLSTLGWKMNPATPLSFLDYLIRRLGLRDPFCWKFLTRCEGVLLSVIRDSRFMSYLPSV 824
           L+LSTL WKMNP TPLSFLD++ RRLGL++  C +FL RCE +LL +I DSRFM YLPSV
Sbjct: 191 LILSTLQWKMNPVTPLSFLDHITRRLGLKNRLCCEFLKRCESILLCIISDSRFMLYLPSV 250

Query: 825 LATATM 842
           L+TATM
Sbjct: 251 LSTATM 256


>emb|CAN79444.1| hypothetical protein VITISV_042479 [Vitis vinifera]
          Length = 419

 Score =  286 bits (732), Expect = 4e-75
 Identities = 152/247 (61%), Positives = 178/247 (72%)
 Frame = +3

Query: 102 NNPKFLLETLYCSXXXXXXXXXXXXXXXXXLEDESYGNDSLISSTIINDTPPWLLQNDMF 281
           +N  FLL+TLYC                   E+  YG+ S           P LL+ D+ 
Sbjct: 14  HNLPFLLDTLYCEESHWEEEVREEGFLEEEEEESYYGDGS-------KPNAPPLLEPDLL 66

Query: 282 CDDEELTSLLTKEQHNPLCNCFQSNPGLEGARREAVKWILKVIAHYSFAALTAVLAVNYL 461
           C+DEEL SL +KE+ N L +  +SNP   GAR EAV+W+L+V AHYSF+ALTAVLAVNY 
Sbjct: 67  CEDEELVSLFSKEEKNDLHSNPESNPLAAGARSEAVEWMLRVNAHYSFSALTAVLAVNYF 126

Query: 462 DRFLFSFRFQNGKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEDSRYLFEAKTIKRME 641
           DRFLFS   Q  KPWMTQLAAVACLSLAAKVEETQVPLLLDLQVE++ Y+FEAKTI+RME
Sbjct: 127 DRFLFSCDVQGEKPWMTQLAAVACLSLAAKVEETQVPLLLDLQVEETMYVFEAKTIQRME 186

Query: 642 ILVLSTLGWKMNPATPLSFLDYLIRRLGLRDPFCWKFLTRCEGVLLSVIRDSRFMSYLPS 821
           I+VLSTL WKMNP TPLSFLDY+ RRLGL++  CW+FL RCE VLLSV+ D RF  YLPS
Sbjct: 187 IMVLSTLRWKMNPVTPLSFLDYITRRLGLKNHLCWEFLKRCERVLLSVLSDCRFGCYLPS 246

Query: 822 VLATATM 842
           V+ATA M
Sbjct: 247 VIATAIM 253


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