BLASTX nr result

ID: Glycyrrhiza24_contig00016275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016275
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523580.1| PREDICTED: zinc finger protein MAGPIE-like [...   183   7e-44
ref|XP_002510356.1| nucleic acid binding protein, putative [Rici...   150   9e-34
gb|ADL36639.1| C2H2L domain class transcription factor [Malus x ...   126   1e-26
ref|XP_004152782.1| PREDICTED: zinc finger protein NUTCRACKER-li...   124   7e-26
ref|NP_195935.2| zinc finger protein JACKDAW [Arabidopsis thalia...   122   2e-25

>ref|XP_003523580.1| PREDICTED: zinc finger protein MAGPIE-like [Glycine max]
          Length = 473

 Score =  183 bits (465), Expect = 7e-44
 Identities = 137/322 (42%), Positives = 156/322 (48%), Gaps = 31/322 (9%)
 Frame = +2

Query: 2    EKKWKCERCSKKYAVKSDWKAHMKTCGTREYKCNCGSLFSRRDSFITHRAFCDVLTEEKI 181
            EKKW+CERCSKKYAV SDWKAHMKTCG+REY+C+CG+LFSRRDSFITHRAFCDVL +E  
Sbjct: 129  EKKWQCERCSKKYAVHSDWKAHMKTCGSREYRCDCGTLFSRRDSFITHRAFCDVLAQESA 188

Query: 182  AL---------SVSNVVEAXXXXXXXXXXXXXXXXXXXXIQSSDILENP-TRLSP-PPXX 328
                       S S VVEA                    IQSS+I ENP T+LSP  P  
Sbjct: 189  RAQAQAQGQGGSNSKVVEASSPPTPPLTPSASVVPPTLSIQSSEIPENPSTKLSPTSPNA 248

Query: 329  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXP------------SQSFTNLMSPLARSDCPA 472
                                         P            + SFTNL+S LARS  P 
Sbjct: 249  TACFVTSSSSTPSNSTTCTTVFASVLAPSPTTPSTPQSPSNSTSSFTNLISNLARSQNPN 308

Query: 473  VXXXXXXXXXXXXXXXXXXXXXHLFPDQHDPPHHYIASPQPPALSATALLQKAAQMGASN 652
                                   L+   +D P HY ASPQ PALSATALLQKAAQMGASN
Sbjct: 309  TIMRESTSLSLSTP---------LYLSNND-PLHYTASPQ-PALSATALLQKAAQMGASN 357

Query: 653  SAXXXXXXXXXXXXXC---GRDHN-NSVSTTSMQWNGHGHVKQENIEPVADXXXXXXXXX 820
            ++                 G+D   N  +TT++QWN  G VKQEN  PV D         
Sbjct: 358  ASLLRGLGLATTTSSSSSFGKDEGFNINATTTLQWN--GQVKQEN-HPVVDNLGLGLLCG 414

Query: 821  XXXVVDVMMGST----GQPMTR 874
               V DVMM  +    GQPMTR
Sbjct: 415  SGSVPDVMMAPSTPFVGQPMTR 436


>ref|XP_002510356.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223551057|gb|EEF52543.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 502

 Score =  150 bits (378), Expect = 9e-34
 Identities = 99/244 (40%), Positives = 112/244 (45%), Gaps = 26/244 (10%)
 Frame = +2

Query: 2   EKKWKCERCSKKYAVKSDWKAHMKTCGTREYKCNCGSLFSRRDSFITHRAFCDVLTEEKI 181
           EKKWKCERCSKKYAV+SDWKAHMKTCGTREYKC+CG+LFSRRDSFITHRAFCD L EE  
Sbjct: 141 EKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESA 200

Query: 182 A--------------LSVSNVVEAXXXXXXXXXXXXXXXXXXXXIQSSDILENPTRLS-- 313
                           ++ +VV                       QSS++ EN   +S  
Sbjct: 201 RAQTLTFMDKEGSNNTNMKSVVAVASPPPPPLTPSTTVVSPGVSAQSSELAENAVNISAA 260

Query: 314 ------PPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSQSFTNLMSPLARSDCPAV 475
                 P                                  S SF+NL+S    SDC A 
Sbjct: 261 TACLTAPDTSTNSTSTTTSNVFASVFASSTAAAISQEGPSSSPSFSNLLSAFTHSDCAAT 320

Query: 476 ----XXXXXXXXXXXXXXXXXXXXXHLFPDQHDPPHHYIASPQPPALSATALLQKAAQMG 643
                                     LFPDQ D   HY  S   PA+SATALLQKAAQMG
Sbjct: 321 MSTPRAVEPPSLSLSSSLYLSSNASSLFPDQ-DQHRHYTQS-SLPAMSATALLQKAAQMG 378

Query: 644 ASNS 655
           AS+S
Sbjct: 379 ASSS 382


>gb|ADL36639.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 541

 Score =  126 bits (317), Expect = 1e-26
 Identities = 68/126 (53%), Positives = 73/126 (57%), Gaps = 20/126 (15%)
 Frame = +2

Query: 2   EKKWKCERCSKKYAVKSDWKAHMKTCGTREYKCNCGSLFSRRDSFITHRAFCDVLTEEKI 181
           EKKWKCERCSKKYAV+SDWKAHMKTCGTREYKC+CG+LFSRRDSFITHRAFCD L EE  
Sbjct: 142 EKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEESA 201

Query: 182 ALSV--------------------SNVVEAXXXXXXXXXXXXXXXXXXXXIQSSDILENP 301
                                   S VV +                    IQSSD+ ENP
Sbjct: 202 KTQTLVIGPDGSMNPNSNPTPSARSGVVAS--PPPPPHTPSNTVVSPALSIQSSDLPENP 259

Query: 302 TRLSPP 319
             LSPP
Sbjct: 260 IGLSPP 265


>ref|XP_004152782.1| PREDICTED: zinc finger protein NUTCRACKER-like [Cucumis sativus]
           gi|449496152|ref|XP_004160056.1| PREDICTED: zinc finger
           protein NUTCRACKER-like [Cucumis sativus]
          Length = 458

 Score =  124 bits (310), Expect = 7e-26
 Identities = 57/70 (81%), Positives = 61/70 (87%)
 Frame = +2

Query: 2   EKKWKCERCSKKYAVKSDWKAHMKTCGTREYKCNCGSLFSRRDSFITHRAFCDVLTEEKI 181
           EKKWKCERCSKKYAV+SDWKAHMKTCGTREYKC+CG+LFSRRDSFITHRAFCD L     
Sbjct: 135 EKKWKCERCSKKYAVQSDWKAHMKTCGTREYKCDCGTLFSRRDSFITHRAFCDALA---F 191

Query: 182 ALSVSNVVEA 211
           A S SNV+ A
Sbjct: 192 ASSDSNVIAA 201


>ref|NP_195935.2| zinc finger protein JACKDAW [Arabidopsis thaliana]
           gi|75325688|sp|Q700D2.1|JKD_ARATH RecName: Full=Zinc
           finger protein JACKDAW; AltName: Full=ID1-like zinc
           finger protein 3 gi|41059985|emb|CAF18563.1| ID1-like
           zinc finger protein 3 [Arabidopsis thaliana]
           gi|45935041|gb|AAS79555.1| C2H2 type zinc finger family
           protein [Arabidopsis thaliana]
           gi|46367480|emb|CAG25866.1| hypothetical protein
           [Arabidopsis thaliana] gi|332003178|gb|AED90561.1| zinc
           finger protein JACKDAW [Arabidopsis thaliana]
          Length = 503

 Score =  122 bits (306), Expect = 2e-25
 Identities = 52/63 (82%), Positives = 58/63 (92%)
 Frame = +2

Query: 2   EKKWKCERCSKKYAVKSDWKAHMKTCGTREYKCNCGSLFSRRDSFITHRAFCDVLTEEKI 181
           EKKWKCE+CSKKYAV+SDWKAH KTCGTREYKC+CG+LFSR+DSFITHRAFCD LTEE  
Sbjct: 156 EKKWKCEKCSKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGA 215

Query: 182 ALS 190
            +S
Sbjct: 216 RMS 218


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