BLASTX nr result

ID: Glycyrrhiza24_contig00016264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016264
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596882.1| Histone deacetylase [Medicago truncatula] gi...   434   e-120
gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK...   433   e-119
ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isofor...   412   e-113
ref|XP_002313479.1| histone deacetylase [Populus trichocarpa] gi...   396   e-108
emb|CBI28344.3| unnamed protein product [Vitis vinifera]              388   e-106

>ref|XP_003596882.1| Histone deacetylase [Medicago truncatula]
           gi|87240922|gb|ABD32780.1| Histone deacetylase
           superfamily [Medicago truncatula]
           gi|355485930|gb|AES67133.1| Histone deacetylase
           [Medicago truncatula]
          Length = 386

 Score =  434 bits (1117), Expect = e-120
 Identities = 209/253 (82%), Positives = 219/253 (86%)
 Frame = +1

Query: 1   PGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 180
           PGSWD      GTTLSSMKHLLDG+GKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL
Sbjct: 117 PGSWDAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 176

Query: 181 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXX 360
           ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLT+SLHMNHGSWGPSHPQSGS+D     
Sbjct: 177 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTVSLHMNHGSWGPSHPQSGSIDELGDG 236

Query: 361 XXXXXXXXIPLPNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFDPNGRQCLT 540
                   IPLPNGTGDNGY+YAF ELVVPS+H+F PDMIV+V+GQDSSAFDPNGRQCLT
Sbjct: 237 EGYGYNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLT 296

Query: 541 MDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXQDPVA 720
           M+GYREIGRIV GLA RHSDGRLLIVQEGGYHVTYSAYCLHATLEGV        QDPVA
Sbjct: 297 MEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVA 356

Query: 721 CYLEDETFPVKVI 759
            Y ED+TF VKVI
Sbjct: 357 YYPEDKTFSVKVI 369


>gb|ACJ84689.1| unknown [Medicago truncatula] gi|388519583|gb|AFK47853.1| unknown
           [Medicago truncatula]
          Length = 386

 Score =  433 bits (1113), Expect = e-119
 Identities = 208/253 (82%), Positives = 219/253 (86%)
 Frame = +1

Query: 1   PGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 180
           PGSWD      GTTLSSMKHLLDG+GKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL
Sbjct: 117 PGSWDAALLAAGTTLSSMKHLLDGHGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 176

Query: 181 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXX 360
           ALDSGCKKVAVIDIDVHYGNGTAEGFYSSN+VLT+SLHMNHGSWGPSHPQSGS+D     
Sbjct: 177 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNEVLTVSLHMNHGSWGPSHPQSGSIDELGDG 236

Query: 361 XXXXXXXXIPLPNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFDPNGRQCLT 540
                   IPLPNGTGDNGY+YAF ELVVPS+H+F PDMIV+V+GQDSSAFDPNGRQCLT
Sbjct: 237 EGYGYNLNIPLPNGTGDNGYVYAFNELVVPSIHKFEPDMIVLVVGQDSSAFDPNGRQCLT 296

Query: 541 MDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXQDPVA 720
           M+GYREIGRIV GLA RHSDGRLLIVQEGGYHVTYSAYCLHATLEGV        QDPVA
Sbjct: 297 MEGYREIGRIVHGLAMRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVLNLPLPLLQDPVA 356

Query: 721 CYLEDETFPVKVI 759
            Y ED+TF VKVI
Sbjct: 357 YYPEDKTFSVKVI 369


>ref|XP_003540263.1| PREDICTED: histone deacetylase 8-like isoform 1 [Glycine max]
          Length = 381

 Score =  412 bits (1059), Expect = e-113
 Identities = 198/253 (78%), Positives = 214/253 (84%)
 Frame = +1

Query: 1   PGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 180
           PGSWD      GTTLS+MKHLL+G+GKV+YALVRPPGHHAQPS ADGYCFLNNAGLAVQL
Sbjct: 117 PGSWDAALLAAGTTLSAMKHLLNGDGKVSYALVRPPGHHAQPSLADGYCFLNNAGLAVQL 176

Query: 181 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXX 360
           ALDSGCKKVAVIDIDVHYGNGTAEGFY SNKVLTISLHMNHGSWGPSHPQSGSVD     
Sbjct: 177 ALDSGCKKVAVIDIDVHYGNGTAEGFYRSNKVLTISLHMNHGSWGPSHPQSGSVDELGEG 236

Query: 361 XXXXXXXXIPLPNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFDPNGRQCLT 540
                   IPLPNGTGD GY++AF ELVVPS+ +FGPDMIV+V+GQDS+AFDPNGRQCLT
Sbjct: 237 EGYGFNLNIPLPNGTGDKGYVHAFNELVVPSIQKFGPDMIVLVLGQDSNAFDPNGRQCLT 296

Query: 541 MDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXQDPVA 720
           M+GYREIGRIV  LA RHS GRLLIVQEGGYHVTYSAYCLHATLEG+         DP+A
Sbjct: 297 MEGYREIGRIVHLLAKRHSAGRLLIVQEGGYHVTYSAYCLHATLEGILNLPMPLLADPIA 356

Query: 721 CYLEDETFPVKVI 759
            YL+DETF V+VI
Sbjct: 357 FYLDDETFSVQVI 369


>ref|XP_002313479.1| histone deacetylase [Populus trichocarpa]
           gi|222849887|gb|EEE87434.1| histone deacetylase [Populus
           trichocarpa]
          Length = 379

 Score =  396 bits (1018), Expect = e-108
 Identities = 188/253 (74%), Positives = 206/253 (81%)
 Frame = +1

Query: 1   PGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 180
           PGSWD      GTTLS+MKH+LDG+GK+AYALVRPPGHHAQP QADGYCFLNNAGLAVQL
Sbjct: 110 PGSWDAALLAAGTTLSAMKHILDGHGKLAYALVRPPGHHAQPKQADGYCFLNNAGLAVQL 169

Query: 181 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXX 360
           ALDSGCKKV VIDIDVHYGNGTAEGFY ++KVLT+SLHMNHGSWGPSHPQ+GSV      
Sbjct: 170 ALDSGCKKVTVIDIDVHYGNGTAEGFYRTDKVLTVSLHMNHGSWGPSHPQNGSVGELGEG 229

Query: 361 XXXXXXXXIPLPNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFDPNGRQCLT 540
                   IPLPNGTGD GY YA K+LVVP+VH+F PDMIV V+GQDSSAFDPNGRQCLT
Sbjct: 230 EGFGYNLNIPLPNGTGDRGYGYAMKKLVVPAVHKFEPDMIVFVVGQDSSAFDPNGRQCLT 289

Query: 541 MDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXQDPVA 720
           MDGYREIGRIV  LA +HS G++LIVQEGGYH+TYSAYCLHA LEGV         DP+A
Sbjct: 290 MDGYREIGRIVHSLANKHSGGKILIVQEGGYHITYSAYCLHAILEGVLDLPQPLLCDPIA 349

Query: 721 CYLEDETFPVKVI 759
            Y EDE F VK +
Sbjct: 350 YYPEDEAFAVKFV 362


>emb|CBI28344.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score =  388 bits (996), Expect = e-106
 Identities = 185/253 (73%), Positives = 206/253 (81%)
 Frame = +1

Query: 1   PGSWDXXXXXXGTTLSSMKHLLDGNGKVAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 180
           PGSWD      GT LS+MKH+LDG+GK+AYALVRPPGHHAQPSQADGYCFLNNAGLAVQL
Sbjct: 79  PGSWDAALLAAGTALSAMKHILDGHGKIAYALVRPPGHHAQPSQADGYCFLNNAGLAVQL 138

Query: 181 ALDSGCKKVAVIDIDVHYGNGTAEGFYSSNKVLTISLHMNHGSWGPSHPQSGSVDXXXXX 360
           AL+SGC KVAVIDIDVHYGNGTAEGFY S+KVLTISLHMNHGSWGPSHPQSGSVD     
Sbjct: 139 ALNSGCAKVAVIDIDVHYGNGTAEGFYHSDKVLTISLHMNHGSWGPSHPQSGSVDEIGVG 198

Query: 361 XXXXXXXXIPLPNGTGDNGYIYAFKELVVPSVHRFGPDMIVMVIGQDSSAFDPNGRQCLT 540
                   IPLPNGTGD GY YA  +LVVP++ ++ P+M+V+V+GQDSSAFDPNGRQCLT
Sbjct: 199 EGFGYNLNIPLPNGTGDRGYAYAMNQLVVPAIQKYEPEMMVLVVGQDSSAFDPNGRQCLT 258

Query: 541 MDGYREIGRIVQGLATRHSDGRLLIVQEGGYHVTYSAYCLHATLEGVXXXXXXXXQDPVA 720
           M+GYREIG+IV+ LA ++SDG LLIVQEGGY VTYSAYCLHATLEGV         DP+A
Sbjct: 259 MEGYREIGQIVRKLADKYSDGHLLIVQEGGYQVTYSAYCLHATLEGVLNLPSPLLSDPIA 318

Query: 721 CYLEDETFPVKVI 759
            Y EDE    KVI
Sbjct: 319 YYPEDELMTTKVI 331


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