BLASTX nr result

ID: Glycyrrhiza24_contig00016204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016204
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [M...   119   2e-25
ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   108   3e-22
emb|CBI21870.3| unnamed protein product [Vitis vinifera]               68   9e-10
emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]    68   9e-10

>ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355508535|gb|AES89677.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1283

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/101 (64%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
 Frame = -1

Query: 307  VELHETSKEHGHKTEQQEKINLSEETGLLASESETGLCTESARASTIKPDLEFEDLGIVY 128
            VE HET+K+ G +TEQQ+K  +SEET LL SESET  C+ES R +T KPD+EFED+GIVY
Sbjct: 1122 VESHETNKKDGLETEQQKKTYISEETNLLVSESETRSCSESVR-TTSKPDIEFEDVGIVY 1180

Query: 127  AHRNEDIVNLRPGIQGKIYTSS-PSSDGLSEPNISLAHPNK 8
            AHRNEDIVN RP IQ ++ TSS  SSDG SEP+ +L H  K
Sbjct: 1181 AHRNEDIVNSRPVIQRQLSTSSTSSSDGQSEPSSTLVHERK 1221


>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
            [Glycine max]
          Length = 870

 Score =  108 bits (271), Expect = 3e-22
 Identities = 64/105 (60%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
 Frame = -1

Query: 307  VELHETSKEHGHKTEQQEKINLSEE-TGLLASESETGLCTESARASTIKPDLEFEDLGIV 131
            +ELHE   EHGH+TEQ E++NLSEE T     ESET LC +S R +T KPDL   DLGIV
Sbjct: 709  IELHE---EHGHETEQPEEVNLSEEETSSSVLESETRLCNKSVRDATSKPDLV--DLGIV 763

Query: 130  YAHRNEDIVNLRPGIQGKIYTSSPSSDGLSEPNIS--LAHPNKIP 2
            Y HRNEDIVN  PGIQGKI TS P  D L +P+IS  L H  K P
Sbjct: 764  YTHRNEDIVNFGPGIQGKIDTSIPLDDSLVKPSISLDLDHQRKKP 808


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/105 (40%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
 Frame = -1

Query: 307  VELHETSKE-HGHKTEQQEKINLSEETGLLASESET----GLCTESARASTIKPDLEFED 143
            +ELHE  ++ HGH   +  K++LSE         E         ES +    K D   ED
Sbjct: 708  IELHENQRQDHGHN--RSTKMDLSELGSYFVQSKEAIETVSSAPESRKPKYFKSDTTLED 765

Query: 142  LGIVYAHRNEDIVNLRPGIQGKIYTSSPSSDGLSEPNISLAHPNK 8
            LGIVYAHRNEDIVN  P IQGK   S    DG  + +I +A   +
Sbjct: 766  LGIVYAHRNEDIVNFGPTIQGKEEASVAQHDGQRQSHIPVAEKRR 810


>emb|CAN79218.1| hypothetical protein VITISV_012795 [Vitis vinifera]
          Length = 874

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 42/105 (40%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
 Frame = -1

Query: 307  VELHETSKE-HGHKTEQQEKINLSEETGLLASESET----GLCTESARASTIKPDLEFED 143
            +ELHE  ++ HGH   +  K++LSE         E         ES +    K D   ED
Sbjct: 708  IELHENQRQDHGHN--RSTKMDLSELGSYFVQSKEAIETVSSAPESRKPKYFKSDTTLED 765

Query: 142  LGIVYAHRNEDIVNLRPGIQGKIYTSSPSSDGLSEPNISLAHPNK 8
            LGIVYAHRNEDIVN  P IQGK   S    DG  + +I +A   +
Sbjct: 766  LGIVYAHRNEDIVNFGPTIQGKEEASVAQHDGQRQSHIPVAEKRR 810


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