BLASTX nr result

ID: Glycyrrhiza24_contig00016184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016184
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   132   4e-29
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   129   3e-28
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   124   1e-26
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   118   4e-25

>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1857

 Score =  132 bits (331), Expect = 4e-29
 Identities = 68/85 (80%), Positives = 69/85 (81%)
 Frame = -3

Query: 260 REKYCIQCXXXXXXXXXXXXXXLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA 81
           REKYCIQC              LHEKGVDVCLALLQQNSKH EASKVALLLPD+MKLICA
Sbjct: 508 REKYCIQCLELLGEYVEVLGPVLHEKGVDVCLALLQQNSKHWEASKVALLLPDIMKLICA 567

Query: 80  LAAHRKFAALFVDRGGMQKLLAVPR 6
           LAAHRKFAALFVDRGGMQKLL VPR
Sbjct: 568 LAAHRKFAALFVDRGGMQKLLDVPR 592


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  129 bits (324), Expect = 3e-28
 Identities = 67/85 (78%), Positives = 68/85 (80%)
 Frame = -3

Query: 260 REKYCIQCXXXXXXXXXXXXXXLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA 81
           REKYCIQC              LHEKGVDVCL LLQ+NSKH EASKVALLLPDVMKLICA
Sbjct: 519 REKYCIQCLELLGEYVEVLGPVLHEKGVDVCLGLLQKNSKHWEASKVALLLPDVMKLICA 578

Query: 80  LAAHRKFAALFVDRGGMQKLLAVPR 6
           LAAHRKFAALFVDRGGMQKLL VPR
Sbjct: 579 LAAHRKFAALFVDRGGMQKLLDVPR 603


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/85 (74%), Positives = 70/85 (82%)
 Frame = -3

Query: 260 REKYCIQCXXXXXXXXXXXXXXLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA 81
           REKYCIQC              LHEKGVDVCLALLQ++SK +EASK+A+LLPDV+KLICA
Sbjct: 654 REKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEASKLAMLLPDVLKLICA 713

Query: 80  LAAHRKFAALFVDRGGMQKLLAVPR 6
           LAAHRKFAA+FVDRGGMQKLLAVPR
Sbjct: 714 LAAHRKFAAVFVDRGGMQKLLAVPR 738


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  124 bits (310), Expect = 1e-26
 Identities = 63/85 (74%), Positives = 70/85 (82%)
 Frame = -3

Query: 260 REKYCIQCXXXXXXXXXXXXXXLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA 81
           REKYCIQC              LHEKGVDVCLALLQ++SK +EASK+A+LLPDV+KLICA
Sbjct: 498 REKYCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLKEASKLAMLLPDVLKLICA 557

Query: 80  LAAHRKFAALFVDRGGMQKLLAVPR 6
           LAAHRKFAA+FVDRGGMQKLLAVPR
Sbjct: 558 LAAHRKFAAVFVDRGGMQKLLAVPR 582


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  118 bits (296), Expect = 4e-25
 Identities = 62/85 (72%), Positives = 65/85 (76%)
 Frame = -3

Query: 260 REKYCIQCXXXXXXXXXXXXXXLHEKGVDVCLALLQQNSKHQEASKVALLLPDVMKLICA 81
           REK+CIQC              LHEKGVDVCLALLQ++SK  E SK A LLPDVMKLICA
Sbjct: 546 REKFCIQCLEILGEYVEVLGPVLHEKGVDVCLALLQRSSKLTEVSKAATLLPDVMKLICA 605

Query: 80  LAAHRKFAALFVDRGGMQKLLAVPR 6
           LAAHRKFAALFVDR GMQKLLAVPR
Sbjct: 606 LAAHRKFAALFVDRSGMQKLLAVPR 630


Top