BLASTX nr result

ID: Glycyrrhiza24_contig00016155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016155
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   567   e-159
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   562   e-158
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   562   e-158
ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medi...   562   e-158
ref|XP_003595946.1| CCR4-NOT transcription complex subunit [Medi...   562   e-158

>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  567 bits (1461), Expect = e-159
 Identities = 271/299 (90%), Positives = 284/299 (94%)
 Frame = -3

Query: 905  LVQFKDTPPFVLTPVLPDEMHEADFLRNMELFHECGENDFDAILADIQKEMNMGDIVKEL 726
            LVQFKDTPPFVLTP+LPDEMHEADFLRNMELFH+ GENDFDAILADIQKEMNMGDIVKEL
Sbjct: 190  LVQFKDTPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKEL 249

Query: 725  GYGCTVDISQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLTFGAALGYNLSE 546
            GYGCTVD+SQCKEI SLFLPLT+N LSKLLGAIA TH GLEDNQ+T+LTF AA GYN+ E
Sbjct: 250  GYGCTVDVSQCKEIFSLFLPLTENTLSKLLGAIACTHIGLEDNQNTYLTFRAAHGYNVPE 309

Query: 545  LPPLNSWNIDVLIDTVKHLAPQTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKEPF 366
            LPPLNSWNIDVLIDT+KHLAP TNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKEPF
Sbjct: 310  LPPLNSWNIDVLIDTLKHLAPHTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKEPF 369

Query: 365  PLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYGDAINGHKLQNGHANHAW 186
            PLHAICG VWKNTEGQLSFLKYAVSAPPE+FTFAHS RQLAY DAINGHKLQNGHANHAW
Sbjct: 370  PLHAICGPVWKNTEGQLSFLKYAVSAPPEIFTFAHSGRQLAYVDAINGHKLQNGHANHAW 429

Query: 185  LCLDLLDVLCKIAEKGHASIVRSILDYPLKHCPEVLLLGMAHINTTYNLFQREVSLIVF 9
            LCLDLLDVLC++AEKGHASIVRSI DYPLKHCPEVLLLG+AHINT YNL Q+EVSLIVF
Sbjct: 430  LCLDLLDVLCQLAEKGHASIVRSIFDYPLKHCPEVLLLGLAHINTAYNLLQQEVSLIVF 488


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  562 bits (1449), Expect = e-158
 Identities = 268/301 (89%), Positives = 285/301 (94%)
 Frame = -3

Query: 905  LVQFKDTPPFVLTPVLPDEMHEADFLRNMELFHECGENDFDAILADIQKEMNMGDIVKEL 726
            LVQFKDTPPFVLTP+LPDEMHEADFLRNMELFH+ GENDFDAILADIQKEMNMGDIVKEL
Sbjct: 189  LVQFKDTPPFVLTPLLPDEMHEADFLRNMELFHDSGENDFDAILADIQKEMNMGDIVKEL 248

Query: 725  GYGCTVDISQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLTFGAALGYNLSE 546
            GYGCTVD+SQCKEI SLFLPLT+N LSKLLGAIA T  GLED+Q+T+LTF AA GYN+SE
Sbjct: 249  GYGCTVDVSQCKEIFSLFLPLTENTLSKLLGAIACTRTGLEDSQNTYLTFRAAHGYNVSE 308

Query: 545  LPPLNSWNIDVLIDTVKHLAPQTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKEPF 366
            LPPLNSWNIDVLIDT+ HLAP TNWVRVIE+LDHEGFFLPSEEAFSFLMSVYKHACKEPF
Sbjct: 309  LPPLNSWNIDVLIDTLMHLAPHTNWVRVIESLDHEGFFLPSEEAFSFLMSVYKHACKEPF 368

Query: 365  PLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYGDAINGHKLQNGHANHAW 186
            PLHAICGS+WKNTEGQLSFLKYAVSAPPE+FTFAHS RQLAY DAINGHKLQNGHANHAW
Sbjct: 369  PLHAICGSIWKNTEGQLSFLKYAVSAPPEIFTFAHSGRQLAYVDAINGHKLQNGHANHAW 428

Query: 185  LCLDLLDVLCKIAEKGHASIVRSILDYPLKHCPEVLLLGMAHINTTYNLFQREVSLIVFP 6
            LCLDLLDVLC++AEKGHASIVR I DYPLKHCPEVLLLG+AHINT YNL Q+EVSLIVFP
Sbjct: 429  LCLDLLDVLCQLAEKGHASIVRLIFDYPLKHCPEVLLLGLAHINTAYNLLQQEVSLIVFP 488

Query: 5    I 3
            +
Sbjct: 489  M 489


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  562 bits (1448), Expect = e-158
 Identities = 272/303 (89%), Positives = 289/303 (95%), Gaps = 2/303 (0%)
 Frame = -3

Query: 905  LVQFKDTPPFVLTPVLPDEMHEADFLR-NMELFHECGENDFDAILADIQKEMNMGDIVKE 729
            LVQ KDTPPFVLTP+LPDEMHEA+ LR N E  HEC ENDFDAILADIQKEMNMGDIVKE
Sbjct: 183  LVQVKDTPPFVLTPLLPDEMHEANILRWNSEFLHECEENDFDAILADIQKEMNMGDIVKE 242

Query: 728  LGYGCTVDISQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLTFGAALGYN-L 552
            LGYGCTVD+SQCKE+LSLFLPLTDNMLSKLLGAIA THAG+EDNQSTFLTFGAALGYN L
Sbjct: 243  LGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHTHAGMEDNQSTFLTFGAALGYNNL 302

Query: 551  SELPPLNSWNIDVLIDTVKHLAPQTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKE 372
            SELPPLNSWNIDVLIDTVK+LAPQTNWVRVIENLDHEGF+LPSEEAFSFLMSVYKHACKE
Sbjct: 303  SELPPLNSWNIDVLIDTVKNLAPQTNWVRVIENLDHEGFYLPSEEAFSFLMSVYKHACKE 362

Query: 371  PFPLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYGDAINGHKLQNGHANH 192
            PFPLHAI GSVWKNTEGQLSFLK+AV APPE+FTFAHSARQLAY DAINGHKLQNGHANH
Sbjct: 363  PFPLHAIYGSVWKNTEGQLSFLKHAVYAPPEIFTFAHSARQLAYVDAINGHKLQNGHANH 422

Query: 191  AWLCLDLLDVLCKIAEKGHASIVRSILDYPLKHCPEVLLLGMAHINTTYNLFQREVSLIV 12
            AWLC+DLLDVLC++AEKGHAS+V SILDYPLK CPE+LLLGMAH+NTTYNLFQREVS+IV
Sbjct: 423  AWLCIDLLDVLCQLAEKGHASVVWSILDYPLKRCPEILLLGMAHVNTTYNLFQREVSMIV 482

Query: 11   FPI 3
            FP+
Sbjct: 483  FPM 485


>ref|XP_003626682.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520704|gb|AET01158.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2418

 Score =  562 bits (1448), Expect = e-158
 Identities = 272/303 (89%), Positives = 289/303 (95%), Gaps = 2/303 (0%)
 Frame = -3

Query: 905  LVQFKDTPPFVLTPVLPDEMHEADFLR-NMELFHECGENDFDAILADIQKEMNMGDIVKE 729
            LVQ KDTPPFVLTP+LPDEMHEA+ LR N E  HEC ENDFDAILADIQKEMNMGDIVKE
Sbjct: 183  LVQVKDTPPFVLTPLLPDEMHEANILRWNSEFLHECEENDFDAILADIQKEMNMGDIVKE 242

Query: 728  LGYGCTVDISQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLTFGAALGYN-L 552
            LGYGCTVD+SQCKE+LSLFLPLTDNMLSKLLGAIA THAG+EDNQSTFLTFGAALGYN L
Sbjct: 243  LGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHTHAGMEDNQSTFLTFGAALGYNNL 302

Query: 551  SELPPLNSWNIDVLIDTVKHLAPQTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKE 372
            SELPPLNSWNIDVLIDTVK+LAPQTNWVRVIENLDHEGF+LPSEEAFSFLMSVYKHACKE
Sbjct: 303  SELPPLNSWNIDVLIDTVKNLAPQTNWVRVIENLDHEGFYLPSEEAFSFLMSVYKHACKE 362

Query: 371  PFPLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYGDAINGHKLQNGHANH 192
            PFPLHAI GSVWKNTEGQLSFLK+AV APPE+FTFAHSARQLAY DAINGHKLQNGHANH
Sbjct: 363  PFPLHAIYGSVWKNTEGQLSFLKHAVYAPPEIFTFAHSARQLAYVDAINGHKLQNGHANH 422

Query: 191  AWLCLDLLDVLCKIAEKGHASIVRSILDYPLKHCPEVLLLGMAHINTTYNLFQREVSLIV 12
            AWLC+DLLDVLC++AEKGHAS+V SILDYPLK CPE+LLLGMAH+NTTYNLFQREVS+IV
Sbjct: 423  AWLCIDLLDVLCQLAEKGHASVVWSILDYPLKRCPEILLLGMAHVNTTYNLFQREVSMIV 482

Query: 11   FPI 3
            FP+
Sbjct: 483  FPM 485


>ref|XP_003595946.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355484994|gb|AES66197.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 537

 Score =  562 bits (1448), Expect = e-158
 Identities = 272/303 (89%), Positives = 289/303 (95%), Gaps = 2/303 (0%)
 Frame = -3

Query: 905  LVQFKDTPPFVLTPVLPDEMHEADFLR-NMELFHECGENDFDAILADIQKEMNMGDIVKE 729
            LVQ KDTPPFVLTP+LPDEMHEA+ LR N E  HEC ENDFDAILADIQKEMNMGDIVKE
Sbjct: 183  LVQVKDTPPFVLTPLLPDEMHEANILRWNSEFLHECEENDFDAILADIQKEMNMGDIVKE 242

Query: 728  LGYGCTVDISQCKEILSLFLPLTDNMLSKLLGAIARTHAGLEDNQSTFLTFGAALGYN-L 552
            LGYGCTVD+SQCKE+LSLFLPLTDNMLSKLLGAIA THAG+EDNQSTFLTFGAALGYN L
Sbjct: 243  LGYGCTVDVSQCKEVLSLFLPLTDNMLSKLLGAIAHTHAGMEDNQSTFLTFGAALGYNNL 302

Query: 551  SELPPLNSWNIDVLIDTVKHLAPQTNWVRVIENLDHEGFFLPSEEAFSFLMSVYKHACKE 372
            SELPPLNSWNIDVLIDTVK+LAPQTNWVRVIENLDHEGF+LPSEEAFSFLMSVYKHACKE
Sbjct: 303  SELPPLNSWNIDVLIDTVKNLAPQTNWVRVIENLDHEGFYLPSEEAFSFLMSVYKHACKE 362

Query: 371  PFPLHAICGSVWKNTEGQLSFLKYAVSAPPEVFTFAHSARQLAYGDAINGHKLQNGHANH 192
            PFPLHAI GSVWKNTEGQLSFLK+AV APPE+FTFAHSARQLAY DAINGHKLQNGHANH
Sbjct: 363  PFPLHAIYGSVWKNTEGQLSFLKHAVYAPPEIFTFAHSARQLAYVDAINGHKLQNGHANH 422

Query: 191  AWLCLDLLDVLCKIAEKGHASIVRSILDYPLKHCPEVLLLGMAHINTTYNLFQREVSLIV 12
            AWLC+DLLDVLC++AEKGHAS+V SILDYPLK CPE+LLLGMAH+NTTYNLFQREVS+IV
Sbjct: 423  AWLCIDLLDVLCQLAEKGHASVVWSILDYPLKRCPEILLLGMAHVNTTYNLFQREVSMIV 482

Query: 11   FPI 3
            FP+
Sbjct: 483  FPM 485


Top