BLASTX nr result

ID: Glycyrrhiza24_contig00016141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016141
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   295   1e-84
ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   285   2e-81
ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   256   5e-68
ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   247   2e-65
ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    99   2e-18

>ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
            max]
          Length = 742

 Score =  295 bits (756), Expect(2) = 1e-84
 Identities = 160/257 (62%), Positives = 182/257 (70%), Gaps = 1/257 (0%)
 Frame = -3

Query: 1004 CYIKDFQGNWYKIDDWKVVGVELEEVLSQGAYMLLYSRVSARPSGLQSIESSETANVQTV 825
            CYIKDF GNWY+IDDWKV  VELEEVLSQGAYMLLYSRV+ARPSGLQSIESSETA VQT+
Sbjct: 446  CYIKDFCGNWYRIDDWKVSSVELEEVLSQGAYMLLYSRVNARPSGLQSIESSETAEVQTI 505

Query: 824  RVELQPGTAEQAECFPDMKTATCTGGREAFPSDISPELKVFGCESVSLTGMNPGVKREHS 645
            + E+ PG  EQAEC  DMKT T +GG EAFP D S ELKV  CE+VSLT MN  VKRE  
Sbjct: 506  KSEVPPGPTEQAECLSDMKTETYSGGCEAFPFDSSLELKVSCCENVSLTEMNSEVKREQF 565

Query: 644  NDIGIIDVTNETSYSAAESSYIGSSHAVKDLGI*TLADRIHTHLVLEEISGCMEEQDDSD 465
             D+ IIDV NE+  +  ESSY+  S AVKD G             LEEIS CMEEQDDSD
Sbjct: 566  KDVDIIDVANESFCNGVESSYMHDSEAVKDSGDIDSNGSKTCSSSLEEISVCMEEQDDSD 625

Query: 464  MAKSGLSPVMPNGFSCFDEDFSVLKDYQNTREDSEHVHDIKLLKLIAVKGDANYSNGYAG 285
            MAKS  S  +P+GFS  D+D SV  DY+NTR+DS+  H   +   +   G ANYSNGYA 
Sbjct: 626  MAKSSPSSCLPDGFSSVDKDSSVSVDYRNTRKDSDSDHKDVVKCKVTSNGFANYSNGYAS 685

Query: 284  ANTH-DIPIEDGGAVFS 237
            AN + D+P+EDG   FS
Sbjct: 686  ANKYDDVPVEDGDGCFS 702



 Score = 45.1 bits (105), Expect(2) = 1e-84
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -1

Query: 202 AEMPQLKRRLPFYNSETDQGNGVKKVEISGNNVEI 98
           A+M QLK RL   N+E D+GNGVK+VEISGN + I
Sbjct: 708 AKMHQLKERLASENAEVDKGNGVKRVEISGNKLII 742


>ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
            max]
          Length = 734

 Score =  285 bits (729), Expect(2) = 2e-81
 Identities = 165/270 (61%), Positives = 190/270 (70%), Gaps = 5/270 (1%)
 Frame = -3

Query: 1004 CYIKDFQGNWYKIDDWKVVGVELEEVLSQGAYMLLYSRVSARPSGLQSIESSETANVQTV 825
            C+IKD  GNWY+IDDWKV  VELEEVLSQGAYMLLYSRV+ARPSGLQSIE SETA VQT+
Sbjct: 438  CFIKDLCGNWYRIDDWKVSSVELEEVLSQGAYMLLYSRVNARPSGLQSIELSETAEVQTI 497

Query: 824  RVELQPGTAEQAECFPDMKTAT--CTGGREAFPSDISPELKVFGCESVSLTGMNPGVKRE 651
            + ++QPG  EQAEC  DMK+ T   + G EAFPSD SPELKV  CESV  T MN  +KRE
Sbjct: 498  KSKVQPGWTEQAECLSDMKSETYSYSRGYEAFPSDSSPELKVSCCESV--TEMNSEIKRE 555

Query: 650  HSNDIGIIDVTNETSYSAAESSYIGSSHAVKDLGI*TLADRIHTHLVLEEISGCMEEQD- 474
             S D+ IIDV +E+  +  E+S++  S AVKDLG            VLEEIS CMEEQD 
Sbjct: 556  QSKDVDIIDVASESFCNGFETSHMHDSEAVKDLGDIDSDGSNTCSSVLEEISVCMEEQDD 615

Query: 473  -DSDMAKSGLSPVMPNGFSCFDEDFSVLKDYQNTREDSEHVHDIKLLKLIAVKGDANYSN 297
             D+DMAKS   P +PNGFSCFD+D SV  DYQNTREDS H  D+   KL +  G ANYSN
Sbjct: 616  NDNDMAKSSPCPHLPNGFSCFDKDSSVSVDYQNTREDSGH-KDVTKCKLTS-NGFANYSN 673

Query: 296  GYAGANTH-DIPIEDGGAVFSEVGSCSTET 210
            GY  AN + D+P+EDG       GS STET
Sbjct: 674  GYGSANKYDDVPVEDGD------GSFSTET 697



 Score = 45.1 bits (105), Expect(2) = 2e-81
 Identities = 23/35 (65%), Positives = 26/35 (74%)
 Frame = -1

Query: 202 AEMPQLKRRLPFYNSETDQGNGVKKVEISGNNVEI 98
           A+M QLK RL   NSE D+GNGVKKVEIS N + I
Sbjct: 700 AKMHQLKERLASENSEVDKGNGVKKVEISANKLII 734


>ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
            max]
          Length = 729

 Score =  256 bits (654), Expect(2) = 5e-68
 Identities = 150/274 (54%), Positives = 176/274 (64%), Gaps = 10/274 (3%)
 Frame = -3

Query: 1004 CYIKDFQGNWYKIDDWKVVGVELEEVLSQGAYMLLYSRVSARPSGL--QSIESSETANVQ 831
            CYIKDFQGNWY+IDDWKV+ VE+EEVLSQGAYMLLYSR SARPSGL  Q+ ESS  A VQ
Sbjct: 451  CYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRCSARPSGLQIQTSESSGIAEVQ 510

Query: 830  TVRVELQPGTAEQAECFPDMKTATCTGGREAFPSDISPELKV---FGCESVSLTGMNPGV 660
            T  VE++PG  EQ EC  +MK  TC+ G E  PSD+SPELKV   + CE  S  G+N  V
Sbjct: 511  T-EVEVEPGQTEQDECLSNMKALTCSRGSEVLPSDVSPELKVSSSYDCE--SFAGLNSPV 567

Query: 659  KREHSNDIGIIDV-----TNETSYSAAESSYIGSSHAVKDLGI*TLADRIHTHLVLEEIS 495
            KRE  ND+ ++DV      NE S  A ESSY+  S    DLG       +     LEE S
Sbjct: 568  KREQFNDVDMMDVDSTGIVNEISCGAVESSYVPISQTDSDLG------DVDMGRSLEETS 621

Query: 494  GCMEEQDDSDMAKSGLSPVMPNGFSCFDEDFSVLKDYQNTREDSEHVHDIKLLKLIAVKG 315
            GC EEQDD+DM  SGL    PN  S FD+  SV +D+QN  EDSEH+ D+   KLI  K 
Sbjct: 622  GCKEEQDDTDMVSSGLCSGPPNDNS-FDKHPSVSRDHQNMEEDSEHI-DVVNCKLITAKD 679

Query: 314  DANYSNGYAGANTHDIPIEDGGAVFSEVGSCSTE 213
            +A YSNGY  AN   IP+ED G+  S + S  TE
Sbjct: 680  NACYSNGYVSANEPSIPVEDAGSQISGISSFPTE 713



 Score = 28.9 bits (63), Expect(2) = 5e-68
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 166 YNSETDQGNGVKKVEISGN 110
           + +E D+GNG+KKVEIS +
Sbjct: 710 FPTENDKGNGIKKVEISAD 728


>ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
            max]
          Length = 735

 Score =  247 bits (631), Expect(2) = 2e-65
 Identities = 142/277 (51%), Positives = 173/277 (62%), Gaps = 13/277 (4%)
 Frame = -3

Query: 1004 CYIKDFQGNWYKIDDWKVVGVELEEVLSQGAYMLLYSRVSARPSG--LQSIESSETANVQ 831
            CYIKDFQGNWY+IDDWKV+ VE+EEVLSQGAYMLLYSR SAR S   +Q+ ESS  A VQ
Sbjct: 452  CYIKDFQGNWYRIDDWKVMTVEVEEVLSQGAYMLLYSRCSARTSSFQIQTSESSGIAEVQ 511

Query: 830  T---VRVELQPGTAEQAECFPDMKTATCTGGREAFPSDISPELKV---FGCESVSLTGMN 669
            T   V +E++PG  EQ EC  +MK  TC+ G E  PSD SPELKV   + CES +  G+N
Sbjct: 512  TEVEVEMEVEPGQTEQDECLSNMKALTCSRGSEVLPSDASPELKVSSSYDCESSA--GLN 569

Query: 668  PGVKREHSNDIGIIDV-----TNETSYSAAESSYIGSSHAVKDLGI*TLADRIHTHLVLE 504
               KRE   D+ ++DV      NE S  A ESSY+  S    DLG       +     LE
Sbjct: 570  SQAKREQFEDVNMMDVDSTGIANELSCGAVESSYVPISQTDSDLG------DVDMGRSLE 623

Query: 503  EISGCMEEQDDSDMAKSGLSPVMPNGFSCFDEDFSVLKDYQNTREDSEHVHDIKLLKLIA 324
            E SGC +EQDD+DM +SG    +PNG S FD+  SV +D+QN  E SEH+ D+   KLI 
Sbjct: 624  ETSGCKQEQDDTDMVRSGSCSGLPNGSSFFDKHPSVSRDHQNMEEHSEHI-DVVNCKLIT 682

Query: 323  VKGDANYSNGYAGANTHDIPIEDGGAVFSEVGSCSTE 213
             K +A Y NGY  AN   +P+ED G  FS + S  TE
Sbjct: 683  AKDNAYYGNGYVSANDSSMPVEDAGTQFSGISSFPTE 719



 Score = 28.9 bits (63), Expect(2) = 2e-65
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 166 YNSETDQGNGVKKVEISGN 110
           + +E D+GNG+KKVEIS +
Sbjct: 716 FPTENDKGNGIKKVEISAD 734


>ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
            vinifera]
          Length = 940

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 56/129 (43%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
 Frame = -3

Query: 1004 CYIKDFQGNWYKIDDWKVVGVELEEVLSQGAYMLLYSRVSARPSGLQSIESSETANVQTV 825
            CY KDF GNWY+IDD KV  VEL++VLSQGAYMLLYSRV  R S L++ E  +  N Q V
Sbjct: 464  CYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLYSRVCVRSSCLKTTEPFKKENEQMV 523

Query: 824  RV--ELQPGTAEQAECFPDMKTATCTGGREAFPSDISPELKVFGCESVSLTGMNPGVKRE 651
             V  E++P + +  ECF   + +         PS+ +   KV  CE +S    N  + R+
Sbjct: 524  EVAQEVEPCSKQPVECFTKAEKSNHVESSRFLPSESNACSKVSNCEELSFR-TNYEIVRK 582

Query: 650  HSNDIGIID 624
             S D+ +I+
Sbjct: 583  DSEDVDMIN 591


Top