BLASTX nr result

ID: Glycyrrhiza24_contig00016123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016123
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   217   9e-55
ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   213   1e-53
ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   197   6e-49
ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   197   7e-49
emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]   196   2e-48

>ref|XP_003554474.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 317

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/149 (74%), Positives = 120/149 (80%)
 Frame = +3

Query: 3   EEQKVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRXXXXXXXXXXXXX 182
           EEQKVS SNDAGRLYVGNLP+S+T S+L E+FGEAG V SVE+VYDR             
Sbjct: 97  EEQKVSDSNDAGRLYVGNLPYSITNSELGELFGEAGTVASVEIVYDRV------------ 144

Query: 183 XXXXXXXXTNRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMG 362
                   T+RSRGFAFVTMGSVEDAKEAIRMFDGSQVGGR+ KVNFPEVPKGGERLVMG
Sbjct: 145 --------TDRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMG 196

Query: 363 PKIRNSYKGFVDSPHKIYAGNLGWGMTSQ 449
            KI NSY+GFVDSPHKIYAGNLGWG+TSQ
Sbjct: 197 SKILNSYRGFVDSPHKIYAGNLGWGLTSQ 225


>ref|XP_003521499.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
           max]
          Length = 314

 Score =  213 bits (543), Expect = 1e-53
 Identities = 109/149 (73%), Positives = 120/149 (80%)
 Frame = +3

Query: 3   EEQKVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRXXXXXXXXXXXXX 182
           EEQKVS S DAGRLYVGNLP+S+T S L+E+FGEAG V SVE++YDR             
Sbjct: 94  EEQKVSDSYDAGRLYVGNLPYSITNSALAELFGEAGTVASVEIMYDRV------------ 141

Query: 183 XXXXXXXXTNRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMG 362
                   T+RSRGFAFVTMG+VEDAKEAIRMFDGSQVGGR+ KVNFPEVPKGGERLVMG
Sbjct: 142 --------TDRSRGFAFVTMGNVEDAKEAIRMFDGSQVGGRTVKVNFPEVPKGGERLVMG 193

Query: 363 PKIRNSYKGFVDSPHKIYAGNLGWGMTSQ 449
            KIRNSY+GFVDSPHKIYAGNLGWG+TSQ
Sbjct: 194 SKIRNSYRGFVDSPHKIYAGNLGWGLTSQ 222


>ref|XP_004136521.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449528229|ref|XP_004171108.1| PREDICTED: 33
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 323

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/149 (63%), Positives = 119/149 (79%)
 Frame = +3

Query: 3   EEQKVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRXXXXXXXXXXXXX 182
           +EQKVS S +AG+LY+GNLP++MT SQLSE+F EAG+VVSV+++YD+             
Sbjct: 104 DEQKVSVSREAGKLYIGNLPYAMTSSQLSEVFAEAGHVVSVQVIYDKV------------ 151

Query: 183 XXXXXXXXTNRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMG 362
                   T+RSRGFAFVTM ++E+AKEAIRMFDGSQ+GGR+ +VNFPEVP+GGE+ VMG
Sbjct: 152 --------TDRSRGFAFVTMATLEEAKEAIRMFDGSQIGGRTVRVNFPEVPRGGEKEVMG 203

Query: 363 PKIRNSYKGFVDSPHKIYAGNLGWGMTSQ 449
           P+IR+SY  FVDSPHKIYAGNLGWG+TSQ
Sbjct: 204 PRIRSSYNKFVDSPHKIYAGNLGWGLTSQ 232


>ref|XP_002264127.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 311

 Score =  197 bits (501), Expect = 7e-49
 Identities = 99/149 (66%), Positives = 117/149 (78%)
 Frame = +3

Query: 3   EEQKVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRXXXXXXXXXXXXX 182
           E+ KVS S +A RLYVGNLP+SMT SQL ++F EAG+V+SVE+VYDR             
Sbjct: 92  EDPKVSDSAEASRLYVGNLPYSMTSSQLGDVFNEAGSVISVEIVYDRV------------ 139

Query: 183 XXXXXXXXTNRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMG 362
                   T+RSRGFAFVTMGSV++AKEAIRMFDGSQVGGR+ KVNFPEVP+GGER VMG
Sbjct: 140 --------TDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMG 191

Query: 363 PKIRNSYKGFVDSPHKIYAGNLGWGMTSQ 449
           PKIR+SY+GFVDSP+KIYAGNL W +TS+
Sbjct: 192 PKIRSSYRGFVDSPYKIYAGNLSWRLTSE 220


>emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis vinifera]
          Length = 454

 Score =  196 bits (498), Expect = 2e-48
 Identities = 99/149 (66%), Positives = 116/149 (77%)
 Frame = +3

Query: 3   EEQKVSTSNDAGRLYVGNLPFSMTPSQLSEIFGEAGNVVSVEMVYDRXXXXXXXXXXXXX 182
           E+ KVS S +A RLYVGNLP+SMT SQL  +F EAG+V+SVE+VYDR             
Sbjct: 235 EDPKVSDSAEASRLYVGNLPYSMTSSQLGXVFNEAGSVISVEIVYDRV------------ 282

Query: 183 XXXXXXXXTNRSRGFAFVTMGSVEDAKEAIRMFDGSQVGGRSAKVNFPEVPKGGERLVMG 362
                   T+RSRGFAFVTMGSV++AKEAIRMFDGSQVGGR+ KVNFPEVP+GGER VMG
Sbjct: 283 --------TDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVPRGGERAVMG 334

Query: 363 PKIRNSYKGFVDSPHKIYAGNLGWGMTSQ 449
           PKIR+SY+GFVDSP+KIYAGNL W +TS+
Sbjct: 335 PKIRSSYRGFVDSPYKIYAGNLSWRLTSE 363


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