BLASTX nr result

ID: Glycyrrhiza24_contig00016108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016108
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607467.1| Integrator complex subunit [Medicago truncat...   235   4e-60
dbj|BAF98228.1| CM0545.610.nc [Lotus japonicus]                       227   8e-58
dbj|BAF98229.1| CM0545.590.nc [Lotus japonicus]                       224   9e-57
ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|2...   153   2e-35
ref|XP_004142339.1| PREDICTED: uncharacterized protein LOC101204...   148   5e-34

>ref|XP_003607467.1| Integrator complex subunit [Medicago truncatula]
           gi|355508522|gb|AES89664.1| Integrator complex subunit
           [Medicago truncatula]
          Length = 358

 Score =  235 bits (599), Expect = 4e-60
 Identities = 116/129 (89%), Positives = 118/129 (91%)
 Frame = -1

Query: 388 MEPTCAACAMEWSIQLEKGLRSSKPGAPVNAILQMGQHLQRWSRELESGIASNAMFGLVP 209
           MEPTCAACAMEWSIQLEKGLRS KPG PV AILQMG HLQRWSRELESGI SN MFGLVP
Sbjct: 1   MEPTCAACAMEWSIQLEKGLRSGKPGVPVKAILQMGPHLQRWSRELESGIVSNGMFGLVP 60

Query: 208 GEDELFANTILLRLADAFRGGDKEIRLSVVRAFLFERKHHDNRKHKQCKGLLSKARVANH 29
           GEDELFANTILLRLADAFRGG+ EIRLSVVR FL ERKHHDNRKHKQCKGLLS ARVANH
Sbjct: 61  GEDELFANTILLRLADAFRGGNTEIRLSVVRVFLIERKHHDNRKHKQCKGLLSVARVANH 120

Query: 28  SELLKRVKS 2
            ELLK+VKS
Sbjct: 121 LELLKQVKS 129


>dbj|BAF98228.1| CM0545.610.nc [Lotus japonicus]
          Length = 329

 Score =  227 bits (579), Expect = 8e-58
 Identities = 111/129 (86%), Positives = 116/129 (89%)
 Frame = -1

Query: 388 MEPTCAACAMEWSIQLEKGLRSSKPGAPVNAILQMGQHLQRWSRELESGIASNAMFGLVP 209
           MEPTCAACAMEWSIQLEKGLRSSKPG PV  IL++G HLQ WSRE ESGI SNA+FGLVP
Sbjct: 1   MEPTCAACAMEWSIQLEKGLRSSKPGVPVKTILKLGPHLQLWSREFESGIDSNAIFGLVP 60

Query: 208 GEDELFANTILLRLADAFRGGDKEIRLSVVRAFLFERKHHDNRKHKQCKGLLSKARVANH 29
           GED LFAN ILLRLADAFRGGDKEIRLS+VR FLFERKH DN KHKQCKGLLSKARVANH
Sbjct: 61  GEDRLFANAILLRLADAFRGGDKEIRLSIVRVFLFERKHRDNGKHKQCKGLLSKARVANH 120

Query: 28  SELLKRVKS 2
            E+LKRVKS
Sbjct: 121 LEMLKRVKS 129


>dbj|BAF98229.1| CM0545.590.nc [Lotus japonicus]
          Length = 176

 Score =  224 bits (570), Expect = 9e-57
 Identities = 109/129 (84%), Positives = 115/129 (89%)
 Frame = -1

Query: 388 MEPTCAACAMEWSIQLEKGLRSSKPGAPVNAILQMGQHLQRWSRELESGIASNAMFGLVP 209
           MEPTCAACAMEWSIQLEKGLRSSKPG PV  IL++G HLQ WSRE E GI SNA+FGLVP
Sbjct: 1   MEPTCAACAMEWSIQLEKGLRSSKPGVPVKTILKLGPHLQLWSREFEYGIDSNAIFGLVP 60

Query: 208 GEDELFANTILLRLADAFRGGDKEIRLSVVRAFLFERKHHDNRKHKQCKGLLSKARVANH 29
           GED LFAN ILLRLADAFRGGDKEIRLS+VR FLFERKH DN KHKQCKGLLSKA+VANH
Sbjct: 61  GEDRLFANAILLRLADAFRGGDKEIRLSIVRVFLFERKHRDNGKHKQCKGLLSKAKVANH 120

Query: 28  SELLKRVKS 2
            E+LKRVKS
Sbjct: 121 LEMLKRVKS 129


>ref|XP_002324606.1| predicted protein [Populus trichocarpa] gi|222866040|gb|EEF03171.1|
           predicted protein [Populus trichocarpa]
          Length = 1237

 Score =  153 bits (386), Expect = 2e-35
 Identities = 80/130 (61%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
 Frame = -1

Query: 388 MEPTCAACAMEWSIQLEKGLRSSKPGAPVNAILQMGQHLQRWSRELESGIASNAMFGLVP 209
           ME   AACAMEWSI+LEK LRS KPG  +  I ++G+ +Q WS+E +  +A   MFGLV 
Sbjct: 1   MERISAACAMEWSIELEKALRSKKPGQTIEGIQRIGKRIQEWSKEPKPTMAVYNMFGLVT 60

Query: 208 GEDELFANTILLRLADAFRGGDKEIRLSVVRAFLFERKHHDNRKHK--QCKGLLSKARVA 35
           GED LFANTILLRLADAFR GD+E R+S+V+ FL E K  DN+K K  Q +G+LSK RV 
Sbjct: 61  GEDRLFANTILLRLADAFRFGDRETRVSIVKVFLLELKSRDNKKMKGRQYRGILSKDRVQ 120

Query: 34  NHSELLKRVK 5
           NH ELLKRVK
Sbjct: 121 NHVELLKRVK 130


>ref|XP_004142339.1| PREDICTED: uncharacterized protein LOC101204851 [Cucumis sativus]
          Length = 1478

 Score =  148 bits (374), Expect = 5e-34
 Identities = 80/128 (62%), Positives = 92/128 (71%)
 Frame = -1

Query: 388 MEPTCAACAMEWSIQLEKGLRSSKPGAPVNAILQMGQHLQRWSRELESGIASNAMFGLVP 209
           ME + AACAMEWSI+LEK LR  KPG  V AI Q+G  LQ+WSRE E  +A   MF LV 
Sbjct: 1   MERSSAACAMEWSIELEKALRLKKPGRAVEAIRQIGCRLQQWSREPEPNVAVYNMFDLVT 60

Query: 208 GEDELFANTILLRLADAFRGGDKEIRLSVVRAFLFERKHHDNRKHKQCKGLLSKARVANH 29
            ED LF+NTILLRLADAF+  DK IRL+VVR FL E    D+ + KQ +G+LSKARV NH
Sbjct: 61  WEDRLFSNTILLRLADAFKFDDKHIRLAVVRVFLSELYSRDSSRSKQYQGILSKARVQNH 120

Query: 28  SELLKRVK 5
            ELL RVK
Sbjct: 121 HELLTRVK 128


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