BLASTX nr result

ID: Glycyrrhiza24_contig00016101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016101
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637450.1| ABC transporter C family member [Medicago tr...   164   7e-39
ref|XP_003637457.1| ABC transporter C family member [Medicago tr...   159   2e-37
ref|XP_003527527.1| PREDICTED: ABC transporter C family member 1...   149   2e-34
ref|XP_002305657.1| multidrug resistance protein ABC transporter...   137   9e-31
emb|CBI30983.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_003637450.1| ABC transporter C family member [Medicago truncatula]
           gi|355503385|gb|AES84588.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1673

 Score =  164 bits (415), Expect = 7e-39
 Identities = 73/89 (82%), Positives = 80/89 (89%)
 Frame = -1

Query: 274 LSQKMGLEPLVWYCKPEANSVWAKVVDSAFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWL 95
           +  KMG EPL+WYCKPE NS+W+K VDSAFGSYTPCAI+TLV+STSNLVLMGLCLYRIWL
Sbjct: 35  IEAKMGFEPLIWYCKPEPNSIWSKTVDSAFGSYTPCAINTLVISTSNLVLMGLCLYRIWL 94

Query: 94  ITSNAKAQRFCLKSNYYNYMLGMLAGYCA 8
           I  NAKAQRFCLKSNYYNY+L MLA YCA
Sbjct: 95  IIFNAKAQRFCLKSNYYNYILAMLASYCA 123


>ref|XP_003637457.1| ABC transporter C family member [Medicago truncatula]
           gi|355503392|gb|AES84595.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1041

 Score =  159 bits (402), Expect = 2e-37
 Identities = 71/85 (83%), Positives = 78/85 (91%)
 Frame = -1

Query: 262 MGLEPLVWYCKPEANSVWAKVVDSAFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWLITSN 83
           MG EPLVWYCKPE NS+W+K VDSAFGSYTPCAI+TLV+STSNLVLMGLCLYRIWLI  N
Sbjct: 1   MGFEPLVWYCKPEPNSIWSKTVDSAFGSYTPCAINTLVISTSNLVLMGLCLYRIWLIIFN 60

Query: 82  AKAQRFCLKSNYYNYMLGMLAGYCA 8
           AKAQRFCLK+NYY+Y+L MLA YCA
Sbjct: 61  AKAQRFCLKTNYYSYILAMLASYCA 85


>ref|XP_003527527.1| PREDICTED: ABC transporter C family member 12-like [Glycine max]
          Length = 1615

 Score =  149 bits (377), Expect = 2e-34
 Identities = 66/85 (77%), Positives = 75/85 (88%)
 Frame = -1

Query: 262 MGLEPLVWYCKPEANSVWAKVVDSAFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWLITSN 83
           MG +PL WYC+P  NS+WAK VDSAFGSYTPCAI+TLV+S SNLVL+GLCLYRIWLIT N
Sbjct: 1   MGFQPLNWYCRPAENSIWAKAVDSAFGSYTPCAINTLVISISNLVLVGLCLYRIWLITCN 60

Query: 82  AKAQRFCLKSNYYNYMLGMLAGYCA 8
           AKAQRFCL SN Y+Y++GMLA YCA
Sbjct: 61  AKAQRFCLSSNCYSYLMGMLAAYCA 85


>ref|XP_002305657.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222848621|gb|EEE86168.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1607

 Score =  137 bits (345), Expect = 9e-31
 Identities = 60/85 (70%), Positives = 73/85 (85%), Gaps = 1/85 (1%)
 Frame = -1

Query: 262 MGLEPLVWYCKPEANSVWAKVVDSAFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWL-ITS 86
           MGLE LVWYC+P AN VWAK VD+AFG+YTPCAID++V+  S+LVL+GLCLYRIWL I +
Sbjct: 1   MGLEALVWYCRPMANGVWAKEVDNAFGAYTPCAIDSIVICISHLVLLGLCLYRIWLIIDN 60

Query: 85  NAKAQRFCLKSNYYNYMLGMLAGYC 11
           N K Q++CL++NYYNYMLG LA YC
Sbjct: 61  NTKVQKYCLRTNYYNYMLGFLAAYC 85


>emb|CBI30983.3| unnamed protein product [Vitis vinifera]
          Length = 1500

 Score =  136 bits (342), Expect = 2e-30
 Identities = 59/84 (70%), Positives = 69/84 (82%)
 Frame = -1

Query: 262 MGLEPLVWYCKPEANSVWAKVVDSAFGSYTPCAIDTLVVSTSNLVLMGLCLYRIWLITSN 83
           M  EPLVWYC+P AN VWAK  +SAFG YTPCA+D++VV  S+LVL+GLC YRIWLI  +
Sbjct: 1   MAFEPLVWYCQPVANGVWAKAAESAFGPYTPCAVDSIVVCISHLVLLGLCCYRIWLIKMD 60

Query: 82  AKAQRFCLKSNYYNYMLGMLAGYC 11
            K QRFCL+SNYYNYMLG+LA YC
Sbjct: 61  FKVQRFCLQSNYYNYMLGLLACYC 84


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