BLASTX nr result

ID: Glycyrrhiza24_contig00016085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016085
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603391.1| SYNC1 protein [Medicago truncatula] gi|35549...    75   6e-12
ref|XP_003523688.1| PREDICTED: uncharacterized protein LOC100781...    75   7e-12
ref|XP_003527791.1| PREDICTED: uncharacterized protein LOC100790...    72   5e-11

>ref|XP_003603391.1| SYNC1 protein [Medicago truncatula] gi|355492439|gb|AES73642.1|
           SYNC1 protein [Medicago truncatula]
          Length = 619

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
 Frame = +1

Query: 70  MKNWWTTRLSGKISNKHAVKLSQLKLELGLFGTRVATT-NDKVAIEITGIATSEKGKEHK 246
           MK WW   L+   SNKH VK++QLKLELGLFG  VATT NDK+AIEIT I    +     
Sbjct: 5   MKKWW---LASNQSNKHTVKVNQLKLELGLFGVNVATTVNDKLAIEITWIKKCNENSSSS 61

Query: 247 PS--FPFHRTSKRRCTH 291
            S   PFHRT K  C+H
Sbjct: 62  FSCMIPFHRTLKPPCSH 78


>ref|XP_003523688.1| PREDICTED: uncharacterized protein LOC100781723 [Glycine max]
          Length = 620

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 43/72 (59%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = +1

Query: 82  WTTRLSGKISNK-HAVKLSQLKLELGLFGTRVATTNDKVAIEITGIATSEKGKEHKPSFP 258
           W TRLSGK + + HAVKL+QLKLELGLFG R+   ND++A EITGIAT +K     P  P
Sbjct: 7   WVTRLSGKPNKQQHAVKLTQLKLELGLFGARLGAANDRIAFEITGIAT-KKETTPLPLVP 65

Query: 259 FHRTSKRRCTHT 294
           F   SKRR TH+
Sbjct: 66  F---SKRRYTHS 74


>ref|XP_003527791.1| PREDICTED: uncharacterized protein LOC100790631 [Glycine max]
          Length = 622

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
 Frame = +1

Query: 61  MTKMKNWWTTRLSGKISNKHAVKLSQLKLELGLFGTRVATTNDKVAIEITGIAT-SEKGK 237
           M+ MK W T     + + +HAVKL+QLKLELGLFG R+   NDKVA EITGIAT  EK K
Sbjct: 1   MSPMKFWVT-----QPNKQHAVKLTQLKLELGLFGARLGAANDKVAFEITGIATKKEKSK 55

Query: 238 EHKPSFPFHRTSKRRCTH 291
                 P    SKRR TH
Sbjct: 56  PKTTPLPLVPFSKRRHTH 73


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