BLASTX nr result

ID: Glycyrrhiza24_contig00016075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016075
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-a...   179   2e-43
gb|AFK43497.1| unknown [Lotus japonicus]                              174   8e-42
ref|XP_003524762.1| PREDICTED: probable U3 small nucleolar RNA-a...   167   7e-40
gb|ACU17792.1| unknown [Glycine max]                                  167   7e-40
gb|ACJ85297.1| unknown [Medicago truncatula]                          161   5e-38

>ref|XP_003531062.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Glycine max]
          Length = 229

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/106 (82%), Positives = 98/106 (92%)
 Frame = +1

Query: 1   LHFIDNQPSDRHVFFAEDREEAKELQSQYSRSEIPLTSDDIPANIKRKTDKSYRELEARR 180
           LH IDNQP+++HVFFAEDREEAKEL+S++ +S+IPLTS DIPA IKRKTD+SY+ELEARR
Sbjct: 120 LHSIDNQPANKHVFFAEDREEAKELESRHQKSKIPLTSGDIPAGIKRKTDRSYQELEARR 179

Query: 181 NRLSRLEKIYMDMAMQKELQKKGRKRKLREDEIVRPTTKPVYKWRA 318
            RLS+LEKIYMDM MQKELQKKGRKRKLREDEIV PTTKPVY WRA
Sbjct: 180 GRLSQLEKIYMDMTMQKELQKKGRKRKLREDEIVCPTTKPVYMWRA 225


>gb|AFK43497.1| unknown [Lotus japonicus]
          Length = 229

 Score =  174 bits (441), Expect = 8e-42
 Identities = 83/106 (78%), Positives = 97/106 (91%)
 Frame = +1

Query: 1   LHFIDNQPSDRHVFFAEDREEAKELQSQYSRSEIPLTSDDIPANIKRKTDKSYRELEARR 180
           LH IDNQP+++H+ FAEDREEAKELQSQYSRSEIPL SD+I  NIKRK D+SY+ELEARR
Sbjct: 120 LHSIDNQPTNKHILFAEDREEAKELQSQYSRSEIPLISDNIHTNIKRKIDRSYKELEARR 179

Query: 181 NRLSRLEKIYMDMAMQKELQKKGRKRKLREDEIVRPTTKPVYKWRA 318
            RLS+L+K+YMDM+M+KEL+K GRKRKLREDEIV PTT+PVYKWRA
Sbjct: 180 TRLSQLQKMYMDMSMKKELRKNGRKRKLREDEIVSPTTEPVYKWRA 225


>ref|XP_003524762.1| PREDICTED: probable U3 small nucleolar RNA-associated protein
           11-like [Glycine max]
          Length = 229

 Score =  167 bits (424), Expect = 7e-40
 Identities = 82/106 (77%), Positives = 95/106 (89%)
 Frame = +1

Query: 1   LHFIDNQPSDRHVFFAEDREEAKELQSQYSRSEIPLTSDDIPANIKRKTDKSYRELEARR 180
           LH ID QP ++HV FAE+REEAKEL+SQY +S+IP TS+DIPA IKRKT +SY+ELEARR
Sbjct: 120 LHSIDKQPVNKHVLFAEEREEAKELESQYQKSKIPFTSEDIPAGIKRKTAQSYQELEARR 179

Query: 181 NRLSRLEKIYMDMAMQKELQKKGRKRKLREDEIVRPTTKPVYKWRA 318
           +RL++LEKIYMDMAMQKELQKKGRKRKL EDEIV PT+KPVYKW A
Sbjct: 180 SRLNQLEKIYMDMAMQKELQKKGRKRKLGEDEIVCPTSKPVYKWCA 225


>gb|ACU17792.1| unknown [Glycine max]
          Length = 138

 Score =  167 bits (424), Expect = 7e-40
 Identities = 82/106 (77%), Positives = 95/106 (89%)
 Frame = +1

Query: 1   LHFIDNQPSDRHVFFAEDREEAKELQSQYSRSEIPLTSDDIPANIKRKTDKSYRELEARR 180
           LH ID QP ++HV FAE+REEAKEL+SQY +S+IP TS+DIPA IKRKT +SY+ELEARR
Sbjct: 29  LHSIDKQPVNKHVLFAEEREEAKELESQYQKSKIPFTSEDIPAGIKRKTAQSYQELEARR 88

Query: 181 NRLSRLEKIYMDMAMQKELQKKGRKRKLREDEIVRPTTKPVYKWRA 318
           +RL++LEKIYMDMAMQKELQKKGRKRKL EDEIV PT+KPVYKW A
Sbjct: 89  SRLNQLEKIYMDMAMQKELQKKGRKRKLGEDEIVCPTSKPVYKWCA 134


>gb|ACJ85297.1| unknown [Medicago truncatula]
          Length = 229

 Score =  161 bits (408), Expect = 5e-38
 Identities = 73/106 (68%), Positives = 96/106 (90%)
 Frame = +1

Query: 1   LHFIDNQPSDRHVFFAEDREEAKELQSQYSRSEIPLTSDDIPANIKRKTDKSYRELEARR 180
           LH ID++P+++HV+FAEDREEAKEL+ Q S+ ++P TSD+IP N+KRKT++SY+ELEAR+
Sbjct: 120 LHLIDHKPANKHVYFAEDREEAKELKQQLSKRKVPSTSDNIPDNLKRKTERSYKELEARK 179

Query: 181 NRLSRLEKIYMDMAMQKELQKKGRKRKLREDEIVRPTTKPVYKWRA 318
            R+S+LEK+YMDMA++KELQK GRKRKLRE+EIV PT +PVYKWRA
Sbjct: 180 ARVSQLEKVYMDMALKKELQKNGRKRKLREEEIVNPTGRPVYKWRA 225


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