BLASTX nr result
ID: Glycyrrhiza24_contig00016038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00016038
(799 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containi... 465 e-129
ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago t... 442 e-122
emb|CBI15366.3| unnamed protein product [Vitis vinifera] 360 3e-97
ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containi... 360 3e-97
ref|XP_002512026.1| pentatricopeptide repeat-containing protein,... 344 1e-92
>ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Glycine max]
Length = 975
Score = 465 bits (1196), Expect = e-129
Identities = 224/265 (84%), Positives = 244/265 (92%)
Frame = -2
Query: 795 SKMLPAKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGAL 616
S ML KL FD ME KS VCWN MI GFSQNELPCEALD FRQMLS GI+PQEIA+ G L
Sbjct: 551 SSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVL 610
Query: 615 GACSQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEA 436
GACSQVSALRLGKEVHSFA+KAHL+ED+FVTC+LIDMYAKCGCMEQSQNIFD VNEKDEA
Sbjct: 611 GACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEA 670
Query: 435 SWNVLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQM 256
WNV+IAGYGIHGHGLKAIELF+ MQ+ G RPDSFTF+G+L+ACNHAGLV EGL+YLGQM
Sbjct: 671 VWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQM 730
Query: 255 QSLYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDI 76
Q+LYG++PKLEHYACVVDMLGRAGQL EALKLVNEMPDEPDSGIWSSLLSSCRNYGDL+I
Sbjct: 731 QNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEI 790
Query: 75 GEEVAKKLLELGPDKAENYVLVSNL 1
GEEV+KKLLEL P+KAENYVL+SNL
Sbjct: 791 GEEVSKKLLELEPNKAENYVLLSNL 815
Score = 118 bits (296), Expect = 1e-24
Identities = 68/235 (28%), Positives = 118/235 (50%), Gaps = 4/235 (1%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGACSQ 601
A+ F ME K+ WN +I +QN P ++LD F M+ SG+ P I L AC++
Sbjct: 455 AERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACAR 514
Query: 600 VSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVL 421
+ LR GKE+H F ++ L D F+ SL+ +Y +C M + IFD + K WNV+
Sbjct: 515 LKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVM 574
Query: 420 IAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYG 241
I G+ + +A++ F+ M S G +P G+L AC+ + LG+ +
Sbjct: 575 ITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALR-----LGKEVHSFA 629
Query: 240 IRPKLEHYACV----VDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYG 88
++ L A V +DM + G + ++ + + + +E D +W+ +++ +G
Sbjct: 630 LKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRV-NEKDEAVWNVIIAGYGIHG 683
Score = 99.0 bits (245), Expect = 1e-18
Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 4/232 (1%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSS-GIRPQEIAIMGALGACSQVSA 592
FDA +EK +N +++G+S+N L +A+ F ++LS+ + P + AC+ V+
Sbjct: 151 FDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVAD 210
Query: 591 LRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIAG 412
+ LG+ VH+ A+KA D+FV +LI MY KCG +E + +F+ + ++ SWN ++
Sbjct: 211 VELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYA 270
Query: 411 YGIHGHGLKAIELFKSM---QSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYG 241
+G + +FK + + G PD T + ++ AC G V G+ G L G
Sbjct: 271 CSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKL-G 329
Query: 240 IRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGD 85
I ++ +VDM + G L EA L +M + W++++ GD
Sbjct: 330 ITEEVTVNNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTIIWGYSKEGD 380
Score = 91.3 bits (225), Expect = 2e-16
Identities = 52/160 (32%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSS---GIRPQEIAIMGALGACSQV 598
F+ M ++ V WN+++ S+N E F+++L S G+ P ++ + AC+ V
Sbjct: 253 FETMRNRNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAV 312
Query: 597 SALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLI 418
+R+G VH A K +TE+ V SL+DMY+KCG + +++ +FD K+ SWN +I
Sbjct: 313 GEVRMGMVVHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTII 372
Query: 417 AGYGIHGHGLKAIELFKSMQ-SYGCRPDSFTFMGLLMACN 301
GY G EL + MQ R + T + +L AC+
Sbjct: 373 WGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Score = 90.9 bits (224), Expect = 3e-16
Identities = 54/176 (30%), Positives = 86/176 (48%), Gaps = 1/176 (0%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQML-SSGIRPQEIAIMGALGACS 604
A+ FD K+ V WNT+I G+S+ + ++M +R E+ ++ L ACS
Sbjct: 353 ARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACS 412
Query: 603 QVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNV 424
L KE+H +A + +D V + + YAKC ++ ++ +F + K +SWN
Sbjct: 413 GEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSWNA 472
Query: 423 LIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQM 256
LI + +G K+++LF M G PD FT LL+AC + G E G M
Sbjct: 473 LIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFM 528
Score = 68.2 bits (165), Expect = 2e-09
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
Frame = -2
Query: 660 SSGIRPQEIAIMGALGACSQVSALRLGKEVHSFAVKAH-LTEDSFVTCSLIDMYAKCGCM 484
SS I + I I+ L AC + +G++VH+ +H L D ++ +I MY+ CG
Sbjct: 87 SSDISKEAIGIL--LRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSP 144
Query: 483 EQSQNIFDWVNEKDEASWNVLIAGYGIHGHGLKAIELF-KSMQSYGCRPDSFTFMGLLMA 307
S+ +FD EKD +N L++GY + AI LF + + + PD+FT + A
Sbjct: 145 SDSRGVFDAAKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKA 204
Query: 306 CNHAGLVAEGLEYLGQMQSLYGIRPKLEHYA------CVVDMLGRAGQLNEALKLVNEMP 145
C V G ++++ + K ++ ++ M G+ G + A+K+ M
Sbjct: 205 CAGVADVELG-------EAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMR 257
Query: 144 DEPDSGIWSSLLSSCRNYGDLDIGEEVAKKLL 49
+ + W+S++ +C G V K+LL
Sbjct: 258 NR-NLVSWNSVMYACSENGGFGECCGVFKRLL 288
>ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 975
Score = 442 bits (1137), Expect = e-122
Identities = 218/263 (82%), Positives = 237/263 (90%)
Frame = -2
Query: 792 KMLPAKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALG 613
K+L AKLFFD MEEK+ VCWNTMINGFSQNE P +ALD F QMLSS I P EI+I+GALG
Sbjct: 552 KILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALG 611
Query: 612 ACSQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEAS 433
ACSQVSALRLGKE+H FAVK+HLTE SFVTCSLIDMYAKCGCMEQSQNIFD V+ K E +
Sbjct: 612 ACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVT 671
Query: 432 WNVLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQ 253
WNVLI GYGIHGHG KAIELFKSMQ+ G RPDS TF+ LL ACNHAGLVAEGLEYLGQMQ
Sbjct: 672 WNVLITGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQ 731
Query: 252 SLYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIG 73
SL+GI+PKLEHYACVVDMLGRAG+LNEAL+LVNE+PD+PDS IWSSLLSSCRNY DLDIG
Sbjct: 732 SLFGIKPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIG 791
Query: 72 EEVAKKLLELGPDKAENYVLVSN 4
E+VA KLLELGPDKAENYVL+SN
Sbjct: 792 EKVANKLLELGPDKAENYVLISN 814
Score = 107 bits (266), Expect = 4e-21
Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 4/211 (1%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGACSQVSAL 589
F ME K WN +I G QN P +ALD + M SG+ P I L AC+++ +L
Sbjct: 459 FCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSL 518
Query: 588 RLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIAGY 409
GKE+H ++ D F+ SL+ +Y +CG + ++ FD + EK+ WN +I G+
Sbjct: 519 SCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGF 578
Query: 408 GIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGIRPK 229
+ A+++F M S PD + +G L AC+ + LG+ + ++
Sbjct: 579 SQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALR-----LGKELHCFAVKSH 633
Query: 228 LEHYACV----VDMLGRAGQLNEALKLVNEM 148
L ++ V +DM + G + ++ + + +
Sbjct: 634 LTEHSFVTCSLIDMYAKCGCMEQSQNIFDRV 664
Score = 97.4 bits (241), Expect = 3e-18
Identities = 64/229 (27%), Positives = 118/229 (51%), Gaps = 4/229 (1%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQM-LSSGIRPQEIAIMGALGACS 604
A++ FD EK+ + WN+MI G+S++ A + R+M + ++ E+ ++ L C
Sbjct: 353 ARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCE 411
Query: 603 QVSALRLGKEVHSFAVK-AHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWN 427
+ KE+H +A++ + D V + + YAKCG + ++ +F + K +SWN
Sbjct: 412 EEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWN 471
Query: 426 VLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSL 247
LI G+ +G KA++L+ M+ G PD FT LL AC ++ G E G M
Sbjct: 472 ALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLR- 530
Query: 246 YGIRPKLEHYACV--VDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLS 106
G +L+ + C+ V + + G++ A KL + +E + W+++++
Sbjct: 531 NGF--ELDEFICISLVSLYVQCGKILLA-KLFFDNMEEKNLVCWNTMIN 576
Score = 94.7 bits (234), Expect = 2e-17
Identities = 69/244 (28%), Positives = 123/244 (50%), Gaps = 3/244 (1%)
Frame = -2
Query: 774 LFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLS-SGIRPQEIAIMGALGACSQV 598
L F+A K+ WN +++G+ +N L +A+ F +M+S + P + + AC V
Sbjct: 150 LVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGV 209
Query: 597 SALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLI 418
+RLG+ VH FA+K + D FV +LI MY K G +E + +FD + +++ SWN ++
Sbjct: 210 YDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVM 269
Query: 417 AGYGIHGHGLKAIELFKSMQS--YGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLY 244
+G ++ LFK + + G PD T + ++ C G V G+ + G L
Sbjct: 270 YACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKL- 328
Query: 243 GIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIGEEV 64
G+ +L+ + ++DM + G L EA L + +E + W+S++ D E+
Sbjct: 329 GLCGELKVNSSLLDMYSKCGYLCEARVLFD--TNEKNVISWNSMIGGYSKDRDFRGAFEL 386
Query: 63 AKKL 52
+K+
Sbjct: 387 LRKM 390
Score = 57.4 bits (137), Expect = 4e-06
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 10/221 (4%)
Frame = -2
Query: 660 SSGIRPQEIAIMGALGACSQVSALRLGKEVHSF-AVKAHLTEDSFVTCSLIDMYAKCGCM 484
SS +P+++ + L C + + +G+++H+F + H D + L+ MY+ C
Sbjct: 87 SSNSKPKQLIGL-LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSP 145
Query: 483 EQSQNIFDWVNEKDEASWNVLIAGYGIHGHGLKAIELFKSMQSY-GCRPDSFTFMGLLMA 307
S +F+ K+ WN L++GY + A+ +F M S PD+FT ++ A
Sbjct: 146 YDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKA 205
Query: 306 CNHAGLVAEGLEYLGQMQSLYGIRPKLEHYACV----VDMLGRAGQLNEALKLVNEMPDE 139
C V LG+ + ++ K+ V + M G+ G + A+K+ ++MP +
Sbjct: 206 C-----VGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-Q 259
Query: 138 PDSGIWSSLLSSCRNYGDLDIGEEVAKKLLE----LGPDKA 28
+ W+S++ +C G + + K LL L PD A
Sbjct: 260 RNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVA 300
>emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 360 bits (923), Expect = 3e-97
Identities = 175/264 (66%), Positives = 212/264 (80%)
Frame = -2
Query: 792 KMLPAKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALG 613
K A++ FD ME +S V WN MI G+SQN LP EA++ FRQMLS GI+P EIAIM G
Sbjct: 360 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 419
Query: 612 ACSQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEAS 433
ACSQ+SALRLGKE+H FA+KAHLTED FV+ S+IDMYAK GC+ SQ IFD + EKD AS
Sbjct: 420 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 479
Query: 432 WNVLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQ 253
WNV+IAGYGIHG G +A+ELF+ M G +PD FTF G+LMAC+HAGLV +GLEY QM
Sbjct: 480 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 539
Query: 252 SLYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIG 73
+L+ I PKLEHY CVVDMLGRAG++++AL+L+ EMP +PDS IWSSLLSSCR +G+L +G
Sbjct: 540 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 599
Query: 72 EEVAKKLLELGPDKAENYVLVSNL 1
E+VA KLLEL P+K ENYVL+SNL
Sbjct: 600 EKVANKLLELEPEKPENYVLISNL 623
Score = 126 bits (316), Expect = 6e-27
Identities = 76/250 (30%), Positives = 129/250 (51%), Gaps = 4/250 (1%)
Frame = -2
Query: 777 KLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGACSQV 598
K FD M+ K+ WN ++ G++QN P +ALD + QM SG+ P I L ACS++
Sbjct: 264 KRVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRM 323
Query: 597 SALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLI 418
+L G+E+H FA++ L D F+ SL+ +Y CG +Q +FD + + SWNV+I
Sbjct: 324 KSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMI 383
Query: 417 AGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGI 238
AGY +G +AI LF+ M S G +P M + AC+ + LG+ + +
Sbjct: 384 AGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR-----LGKELHCFAL 438
Query: 237 RPKLEH----YACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIGE 70
+ L + ++DM + G + + ++ + + E D W+ +++ +G
Sbjct: 439 KAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGRGKEAL 497
Query: 69 EVAKKLLELG 40
E+ +K+L LG
Sbjct: 498 ELFEKMLRLG 507
Score = 107 bits (266), Expect = 4e-21
Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 2/175 (1%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLS-SGIRPQEIAIMGALGACS 604
+++ FD + K+ WN +++ +++NEL +A+ F +++S + +P + + AC+
Sbjct: 160 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 219
Query: 603 QVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQS-QNIFDWVNEKDEASWN 427
+ L LG+ +H A K L D FV +LI MY KCG +E++ + +FD ++ K +SWN
Sbjct: 220 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWN 279
Query: 426 VLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLG 262
L+ GY + KA++L+ M G PD FT LL+AC+ + G E G
Sbjct: 280 ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 334
Score = 71.2 bits (173), Expect = 2e-10
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 13/207 (6%)
Frame = -2
Query: 690 EALDAFRQ-----MLSSGIRPQEIAIMGALGACSQVSALRLGKEVHSF-AVKAHLTEDSF 529
EALD ++ +L S R + + ++ L AC Q + +G+ +H + D
Sbjct: 85 EALDFLQRESDDVVLDSAQRSEAMGVL--LQACGQRKDIEVGRRLHEMVSASTQFCNDFV 142
Query: 528 VTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIAGYGIHGHGLKAIELFKSMQSY- 352
+ +I MY+ CG S+ +FD + K+ WN +++ Y + A+ +F + S
Sbjct: 143 LNTRIITMYSMCGSPSDSRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVT 202
Query: 351 GCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGIRPKLEHYA------CVVDMLGR 190
+PD+FT ++ AC GL LG Q ++G+ K++ + ++ M G+
Sbjct: 203 EHKPDNFTLPCVIKAC-------AGLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGK 255
Query: 189 AGQLNEALKLVNEMPDEPDSGIWSSLL 109
G + EA+K V ++ D W++LL
Sbjct: 256 CGLVEEAVKRVFDLMDTKTVSSWNALL 282
>ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein At1g18485-like
[Vitis vinifera]
Length = 881
Score = 360 bits (923), Expect = 3e-97
Identities = 175/264 (66%), Positives = 212/264 (80%)
Frame = -2
Query: 792 KMLPAKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALG 613
K A++ FD ME +S V WN MI G+SQN LP EA++ FRQMLS GI+P EIAIM G
Sbjct: 458 KPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCG 517
Query: 612 ACSQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEAS 433
ACSQ+SALRLGKE+H FA+KAHLTED FV+ S+IDMYAK GC+ SQ IFD + EKD AS
Sbjct: 518 ACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVAS 577
Query: 432 WNVLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQ 253
WNV+IAGYGIHG G +A+ELF+ M G +PD FTF G+LMAC+HAGLV +GLEY QM
Sbjct: 578 WNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVEDGLEYFNQML 637
Query: 252 SLYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIG 73
+L+ I PKLEHY CVVDMLGRAG++++AL+L+ EMP +PDS IWSSLLSSCR +G+L +G
Sbjct: 638 NLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLG 697
Query: 72 EEVAKKLLELGPDKAENYVLVSNL 1
E+VA KLLEL P+K ENYVL+SNL
Sbjct: 698 EKVANKLLELEPEKPENYVLISNL 721
Score = 125 bits (314), Expect = 1e-26
Identities = 75/247 (30%), Positives = 128/247 (51%), Gaps = 4/247 (1%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGACSQVSAL 589
FD M+ K+ WN ++ G++QN P +ALD + QM SG+ P I L ACS++ +L
Sbjct: 365 FDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSL 424
Query: 588 RLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIAGY 409
G+E+H FA++ L D F+ SL+ +Y CG +Q +FD + + SWNV+IAGY
Sbjct: 425 HYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGY 484
Query: 408 GIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGIRPK 229
+G +AI LF+ M S G +P M + AC+ + LG+ + ++
Sbjct: 485 SQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALR-----LGKELHCFALKAH 539
Query: 228 LEH----YACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIGEEVA 61
L + ++DM + G + + ++ + + E D W+ +++ +G E+
Sbjct: 540 LTEDIFVSSSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGRGKEALELF 598
Query: 60 KKLLELG 40
+K+L LG
Sbjct: 599 EKMLRLG 605
Score = 102 bits (255), Expect = 7e-20
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSG--IRPQEIAIMGALGAC 607
A+L FD ++K+ V WN+MI G+++ E C ++M + ++ E I+ L C
Sbjct: 258 AQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Query: 606 SQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWN 427
+ S L+ KE+H ++ + L + V + I Y +CG + S+ +FD ++ K +SWN
Sbjct: 318 LERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWN 377
Query: 426 VLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLG 262
L+ GY + KA++L+ M G PD FT LL+AC+ + G E G
Sbjct: 378 ALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHG 432
Score = 98.6 bits (244), Expect = 1e-18
Identities = 61/227 (26%), Positives = 119/227 (52%), Gaps = 3/227 (1%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLS-SGIRPQEIAIMGALGACS 604
+++ FD + K+ WN +++ +++NEL +A+ F +++S + +P + + AC+
Sbjct: 53 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 112
Query: 603 QVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNV 424
+ L LG+ +H A K L D FV +LI MY KCG +E++ +F+ + E++ SWN
Sbjct: 113 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNS 172
Query: 423 LIAGYGIHGHGLKAIELFKSM--QSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQS 250
+I G+ +G ++ F+ M PD T + +L C + +G+ G
Sbjct: 173 IICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVK 232
Query: 249 LYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLL 109
L G+ +L ++DM + L+EA +L+ + D+ + W+S++
Sbjct: 233 L-GLNEELMVNNSLIDMYSKCRFLSEA-QLLFDKNDKKNIVSWNSMI 277
Score = 97.1 bits (240), Expect = 4e-18
Identities = 55/159 (34%), Positives = 84/159 (52%), Gaps = 4/159 (2%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQML--SSGIRPQEIAIMGALGACSQVS 595
F+ M E++ V WN++I GFS+N E+ +AFR+ML P ++ L C+
Sbjct: 159 FEHMPERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEE 218
Query: 594 ALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIA 415
+ G VH AVK L E+ V SLIDMY+KC + ++Q +FD ++K+ SWN +I
Sbjct: 219 DIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIG 278
Query: 414 GYGIHGHGLKAIELFKSMQSYGC--RPDSFTFMGLLMAC 304
GY + L + MQ+ + D FT + +L C
Sbjct: 279 GYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVC 317
Score = 67.8 bits (164), Expect = 3e-09
Identities = 49/198 (24%), Positives = 91/198 (45%), Gaps = 8/198 (4%)
Frame = -2
Query: 618 LGACSQVSALRLGKEVHSF-AVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKD 442
L AC Q + +G+ +H + D + +I MY+ CG S+ +FD + K+
Sbjct: 5 LQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRRKN 64
Query: 441 EASWNVLIAGYGIHGHGLKAIELFKSMQSY-GCRPDSFTFMGLLMACNHAGLVAEGLEYL 265
WN +++ Y + A+ +F + S +PD+FT ++ AC GL L
Sbjct: 65 LFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKAC-------AGLLDL 117
Query: 264 GQMQSLYGIRPKLEHYA------CVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSS 103
G Q ++G+ K++ + ++ M G+ G + EA+K+ MP E + W+S++
Sbjct: 118 GLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMP-ERNLVSWNSIICG 176
Query: 102 CRNYGDLDIGEEVAKKLL 49
G L +++L
Sbjct: 177 FSENGFLQESFNAFREML 194
>ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223549206|gb|EEF50695.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 810
Score = 344 bits (882), Expect = 1e-92
Identities = 161/260 (61%), Positives = 209/260 (80%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGACSQ 601
A+L FD MEEKSSV WN MI+G+SQN LP +AL FR+++S G +P +IA++ LGACSQ
Sbjct: 391 ARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQ 450
Query: 600 VSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVL 421
SALRLGKE H +A+KA L ED FV CS IDMYAK GC+++S+++FD + KD ASWN +
Sbjct: 451 QSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAI 510
Query: 420 IAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYG 241
IA YG+HG G ++IELF+ M+ G PD FTF+G+L C+HAGLV EGL+Y +MQ+ +G
Sbjct: 511 IAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHG 570
Query: 240 IRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLDIGEEVA 61
I PKLEHYACV+DMLGRAG+L++AL+LV+EMP++PDS +WSSLLS CRN+G+L+IG+ VA
Sbjct: 571 IEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVA 630
Query: 60 KKLLELGPDKAENYVLVSNL 1
+KLLEL P ENYV +SNL
Sbjct: 631 EKLLELEPKNVENYVSLSNL 650
Score = 123 bits (308), Expect = 5e-26
Identities = 75/254 (29%), Positives = 136/254 (53%), Gaps = 4/254 (1%)
Frame = -2
Query: 789 MLPAKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSSGIRPQEIAIMGALGA 610
++ A+ F +ME K+ WN +I G +QN P +AL+ + QM SG+ P I L A
Sbjct: 287 LICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLA 346
Query: 609 CSQVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASW 430
+ + +LR GKEVH F ++ L DSF+ SL+ +Y CG ++ +FD + EK SW
Sbjct: 347 SAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSW 406
Query: 429 NVLIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQS 250
N +I+GY +G A+ LF+ + S G +P + +L AC+ + LG+
Sbjct: 407 NAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALR-----LGKETH 461
Query: 249 LYGIRPKLEH---YAC-VVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGDL 82
Y ++ L AC +DM ++G + E+ + + + ++ D W++++++ +GD
Sbjct: 462 CYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNK-DLASWNAIIAAYGVHGDG 520
Query: 81 DIGEEVAKKLLELG 40
+ E+ +++ ++G
Sbjct: 521 EESIELFERMRKVG 534
Score = 105 bits (263), Expect = 9e-21
Identities = 71/239 (29%), Positives = 112/239 (46%), Gaps = 8/239 (3%)
Frame = -2
Query: 780 AKLFFDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQM-LSSGIRPQEIAIMGALGACS 604
A++ FD K++V WNTMI G EA + FR+M + I E+ ++ L AC
Sbjct: 188 AQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACL 247
Query: 603 QVSALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNV 424
++S LR KE+H ++++ D V + YAKCG + ++ +F + K SWN
Sbjct: 248 EISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNSWNA 307
Query: 423 LIAGYGIHGHGLKAIELFKSMQSYGCRPDSFTFMGLLMACNHAGLVAEGLEYLG------ 262
LI G +G KA+ L+ M G PD FT LL+A H + G E G
Sbjct: 308 LIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHG 367
Query: 261 -QMQSLYGIRPKLEHYACVVDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYG 88
++ S GI ++ + G+ + A L + M +E S W++++S G
Sbjct: 368 LEIDSFIGI--------SLLSLYIHCGESSSARLLFDGM-EEKSSVSWNAMISGYSQNG 417
Score = 103 bits (258), Expect = 3e-20
Identities = 70/235 (29%), Positives = 116/235 (49%), Gaps = 7/235 (2%)
Frame = -2
Query: 768 FDAMEEKSSVCWNTMINGFSQNELPCEALDAFRQMLSS--GIRPQEIAIMGALGACSQVS 595
F M ++ V WN++I+GFS+N + D +M++ G+ P ++ L C++
Sbjct: 89 FHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREV 148
Query: 594 ALRLGKEVHSFAVKAHLTEDSFVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIA 415
+++G +H AVK L+ED V SL+DMY+KCG + ++Q +FD N K+ SWN +I
Sbjct: 149 DVQMGIRIHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIG 208
Query: 414 GYGIHGHGLKAIELFKSMQ-SYGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGI 238
G G+ +A LF+ MQ + T + +L AC L L L ++ Y I
Sbjct: 209 GLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPAC----LEISQLRSLKELHG-YSI 263
Query: 237 RPKLEHYACV----VDMLGRAGQLNEALKLVNEMPDEPDSGIWSSLLSSCRNYGD 85
R ++ V V + G L A ++ M + + W++L+ C GD
Sbjct: 264 RHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTVNS-WNALIGGCAQNGD 317
Score = 67.8 bits (164), Expect = 3e-09
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Frame = -2
Query: 708 QNELPCEALDAFRQMLS-SGIRPQEIAIMGALGACSQVSALRLGKEVHSFAVKAHLTEDS 532
+NEL +A+D F ++++ + + AC+ LG+ +H +K L D
Sbjct: 7 RNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDV 66
Query: 531 FVTCSLIDMYAKCGCMEQSQNIFDWVNEKDEASWNVLIAGYGIHGHGLKAIELFKSMQS- 355
FV +LI MY K G ++ + +F ++ ++ SWN +I+G+ +G ++ M +
Sbjct: 67 FVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAG 126
Query: 354 -YGCRPDSFTFMGLLMACNHAGLVAEGLEYLGQMQSLYGIRPKLEHYACVVDMLGRAGQL 178
G PD T + +L C V G+ G L G+ + +VDM + G L
Sbjct: 127 EEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKL-GLSEDVRVNNSLVDMYSKCGYL 185
Query: 177 NEALKLVNE 151
EA L ++
Sbjct: 186 TEAQMLFDK 194