BLASTX nr result

ID: Glycyrrhiza24_contig00016005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00016005
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540924.1| PREDICTED: putative DNA repair and recombina...   250   7e-65
ref|XP_003526273.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   248   5e-64
ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [M...   243   1e-62
ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   226   1e-57
emb|CBI21870.3| unnamed protein product [Vitis vinifera]              226   1e-57

>ref|XP_003540924.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
           [Glycine max]
          Length = 870

 Score =  250 bits (639), Expect = 7e-65
 Identities = 122/128 (95%), Positives = 124/128 (96%)
 Frame = -3

Query: 385 ANRDLIYDKLEANGVEILITSFDTYRIHGISLSDINWNVVIIDEAHRLKNEKSKLYKACL 206
           ANR+LIYDKLEAN VEILITSFDTYRIHG SL DINWN+VIIDEAHRLKNEKSKLYKACL
Sbjct: 223 ANRNLIYDKLEANEVEILITSFDTYRIHGSSLLDINWNIVIIDEAHRLKNEKSKLYKACL 282

Query: 205 EIKTLRRYGLTGTMMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 26
           EIKTLRRYGLTGT MQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF
Sbjct: 283 EIKTLRRYGLTGTAMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 342

Query: 25  VQIANKRK 2
           VQIANKRK
Sbjct: 343 VQIANKRK 350


>ref|XP_003526273.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Glycine max]
          Length = 483

 Score =  248 bits (632), Expect = 5e-64
 Identities = 120/128 (93%), Positives = 123/128 (96%)
 Frame = -3

Query: 385 ANRDLIYDKLEANGVEILITSFDTYRIHGISLSDINWNVVIIDEAHRLKNEKSKLYKACL 206
           ANRDLIYDKLEAN VE+LITSFDTYRIHG SL DINWN+VIIDEAH+L NEKSKLYKACL
Sbjct: 164 ANRDLIYDKLEANEVELLITSFDTYRIHGSSLLDINWNIVIIDEAHQLTNEKSKLYKACL 223

Query: 205 EIKTLRRYGLTGTMMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 26
           EIKTLRRYGLTGT MQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF
Sbjct: 224 EIKTLRRYGLTGTAMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 283

Query: 25  VQIANKRK 2
           VQIANKRK
Sbjct: 284 VQIANKRK 291


>ref|XP_003607480.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
           gi|355508535|gb|AES89677.1|
           Chromodomain-helicase-DNA-binding protein [Medicago
           truncatula]
          Length = 1283

 Score =  243 bits (620), Expect = 1e-62
 Identities = 120/129 (93%), Positives = 124/129 (96%), Gaps = 1/129 (0%)
 Frame = -3

Query: 385 ANRDLIYDKLEANGVEILITSFDTYRIHG-ISLSDINWNVVIIDEAHRLKNEKSKLYKAC 209
           ANRDLIYDKLEANGVE+LITSFDTYRIHG  SLSDI WN VIIDEAHRLKNEKSKLYKAC
Sbjct: 541 ANRDLIYDKLEANGVEVLITSFDTYRIHGNSSLSDIQWNTVIIDEAHRLKNEKSKLYKAC 600

Query: 208 LEIKTLRRYGLTGTMMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDR 29
           LEIKTLRRYGLTGT+MQNKI+ELFN+FD VAPGSLGTREHFREFYDEPLKHGQRSTAPDR
Sbjct: 601 LEIKTLRRYGLTGTVMQNKILELFNIFDLVAPGSLGTREHFREFYDEPLKHGQRSTAPDR 660

Query: 28  FVQIANKRK 2
           FVQIANKRK
Sbjct: 661 FVQIANKRK 669


>ref|XP_002274640.2| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
           recombination protein RAD26-like [Vitis vinifera]
          Length = 851

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/128 (83%), Positives = 119/128 (92%)
 Frame = -3

Query: 385 ANRDLIYDKLEANGVEILITSFDTYRIHGISLSDINWNVVIIDEAHRLKNEKSKLYKACL 206
           ANRDLI DKLEA+GVEILITSFDTYRIHG  LS++ W +V+IDEAHRLKNEKSKLY ACL
Sbjct: 222 ANRDLILDKLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACL 281

Query: 205 EIKTLRRYGLTGTMMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 26
           EIKT +R GLTGT+MQNKIMELFNLFDWVAPG LGTREHFREFYDEPLKHGQRSTAP+RF
Sbjct: 282 EIKTCKRIGLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERF 341

Query: 25  VQIANKRK 2
           V++A++RK
Sbjct: 342 VRVADERK 349


>emb|CBI21870.3| unnamed protein product [Vitis vinifera]
          Length = 874

 Score =  226 bits (576), Expect = 1e-57
 Identities = 107/128 (83%), Positives = 119/128 (92%)
 Frame = -3

Query: 385 ANRDLIYDKLEANGVEILITSFDTYRIHGISLSDINWNVVIIDEAHRLKNEKSKLYKACL 206
           ANRDLI DKLEA+GVEILITSFDTYRIHG  LS++ W +V+IDEAHRLKNEKSKLY ACL
Sbjct: 222 ANRDLILDKLEAHGVEILITSFDTYRIHGSILSEVPWEIVVIDEAHRLKNEKSKLYTACL 281

Query: 205 EIKTLRRYGLTGTMMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPDRF 26
           EIKT +R GLTGT+MQNKIMELFNLFDWVAPG LGTREHFREFYDEPLKHGQRSTAP+RF
Sbjct: 282 EIKTCKRIGLTGTIMQNKIMELFNLFDWVAPGCLGTREHFREFYDEPLKHGQRSTAPERF 341

Query: 25  VQIANKRK 2
           V++A++RK
Sbjct: 342 VRVADERK 349


Top