BLASTX nr result

ID: Glycyrrhiza24_contig00015978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015978
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796...   166   1e-39
ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago tr...   161   4e-38
ref|XP_002528258.1| conserved hypothetical protein [Ricinus comm...   115   3e-24
ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264...   108   3e-22
emb|CBI37915.3| unnamed protein product [Vitis vinifera]              108   3e-22

>ref|XP_003540628.1| PREDICTED: uncharacterized protein LOC100796560 [Glycine max]
          Length = 1969

 Score =  166 bits (421), Expect = 1e-39
 Identities = 81/103 (78%), Positives = 90/103 (87%)
 Frame = +3

Query: 6    LVSKDSSLVDALMNYIERADDLIKSKPRILLCVLNFMVALWQGAPQYPNLLESLRSHGKF 185
            +VSK SSLVDALM+YIERADDLIKS PRILLCVLNFM+ALWQGAP Y NLL++LR HGKF
Sbjct: 991  VVSKRSSLVDALMHYIERADDLIKSNPRILLCVLNFMIALWQGAPHYANLLDALRRHGKF 1050

Query: 186  WKHLANAISNNGSSETPLLENLKENDALNLAYSFHCQSAILGI 314
            W+HLANAISN  SSE PLL +L+E DA NLAY FHCQS+I GI
Sbjct: 1051 WEHLANAISNIASSEIPLLRSLEEKDAFNLAYCFHCQSSIHGI 1093


>ref|XP_003607275.1| Nucleoporin NUP188-like protein [Medicago truncatula]
            gi|355508330|gb|AES89472.1| Nucleoporin NUP188-like
            protein [Medicago truncatula]
          Length = 1967

 Score =  161 bits (408), Expect = 4e-38
 Identities = 86/113 (76%), Positives = 89/113 (78%), Gaps = 9/113 (7%)
 Frame = +3

Query: 3    PLVSKDSSLVDALMNYIERADDLIK---------SKPRILLCVLNFMVALWQGAPQYPNL 155
            P VSK S LVDAL+NYIERADDLIK          KPRILLCVLN M ALWQGA QY NL
Sbjct: 990  PPVSKGSVLVDALINYIERADDLIKRYDPEGFVVGKPRILLCVLNLMTALWQGATQYANL 1049

Query: 156  LESLRSHGKFWKHLANAISNNGSSETPLLENLKENDALNLAYSFHCQSAILGI 314
            LESLRS   FWKHLANAI+N  SSETPLLE+LKE DALNLAYSF CQSAILGI
Sbjct: 1050 LESLRSRVNFWKHLANAITNTASSETPLLESLKEKDALNLAYSFRCQSAILGI 1102


>ref|XP_002528258.1| conserved hypothetical protein [Ricinus communis]
            gi|223532295|gb|EEF34096.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1783

 Score =  115 bits (289), Expect = 3e-24
 Identities = 61/103 (59%), Positives = 73/103 (70%)
 Frame = +3

Query: 6    LVSKDSSLVDALMNYIERADDLIKSKPRILLCVLNFMVALWQGAPQYPNLLESLRSHGKF 185
            L S  SSL+DALM  IE+  D I S PR+L+ VL+F+ ALWQGA QY N+LESL+S   F
Sbjct: 886  LQSHKSSLLDALMQNIEKGGDFINSNPRLLVVVLDFLKALWQGAAQYINILESLKSFRLF 945

Query: 186  WKHLANAISNNGSSETPLLENLKENDALNLAYSFHCQSAILGI 314
            WK L+N IS   SSE P+LENL E DA +LAY + CQS IL I
Sbjct: 946  WKKLSNCISLITSSERPVLENLTEKDAQSLAYKYRCQSVILEI 988


>ref|XP_002277289.2| PREDICTED: uncharacterized protein LOC100264071 [Vitis vinifera]
          Length = 1983

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/103 (55%), Positives = 72/103 (69%)
 Frame = +3

Query: 6    LVSKDSSLVDALMNYIERADDLIKSKPRILLCVLNFMVALWQGAPQYPNLLESLRSHGKF 185
            L S   SLVDAL+  IER+DDLI S PR+LL VLN + ALWQGA QY ++LE L++  KF
Sbjct: 999  LGSVKPSLVDALLQVIERSDDLINSNPRLLLNVLNLLKALWQGAAQYADILEWLKNSEKF 1058

Query: 186  WKHLANAISNNGSSETPLLENLKENDALNLAYSFHCQSAILGI 314
            WK   N+IS     + PL ENL E +AL+LAY + CQ+A+L I
Sbjct: 1059 WKLFCNSISLIARMKAPLPENLTEMEALSLAYKYQCQTAVLEI 1101


>emb|CBI37915.3| unnamed protein product [Vitis vinifera]
          Length = 1958

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/103 (55%), Positives = 72/103 (69%)
 Frame = +3

Query: 6    LVSKDSSLVDALMNYIERADDLIKSKPRILLCVLNFMVALWQGAPQYPNLLESLRSHGKF 185
            L S   SLVDAL+  IER+DDLI S PR+LL VLN + ALWQGA QY ++LE L++  KF
Sbjct: 1022 LGSVKPSLVDALLQVIERSDDLINSNPRLLLNVLNLLKALWQGAAQYADILEWLKNSEKF 1081

Query: 186  WKHLANAISNNGSSETPLLENLKENDALNLAYSFHCQSAILGI 314
            WK   N+IS     + PL ENL E +AL+LAY + CQ+A+L I
Sbjct: 1082 WKLFCNSISLIARMKAPLPENLTEMEALSLAYKYQCQTAVLEI 1124


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