BLASTX nr result

ID: Glycyrrhiza24_contig00015950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015950
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603172.1| RNA-binding protein with multiple splicing [...   340   5e-91
ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809...   312   1e-82
ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycin...   312   1e-82
gb|AFK48970.1| unknown [Lotus japonicus]                              306   5e-81
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   236   1e-59

>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355492220|gb|AES73423.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 229

 Score =  340 bits (871), Expect = 5e-91
 Identities = 170/214 (79%), Positives = 182/214 (85%), Gaps = 5/214 (2%)
 Frame = +1

Query: 118 GASIARSSFAGYIPSEA----SPHPNSTEFRGIGSDYLQKDVSLFRMGPYGVDDAVGSRV 285
           GAS ARSS+AGYIPSEA    SP P ST+F G GSDYL KDVSLFRM PYGVDD  GSRV
Sbjct: 16  GASFARSSYAGYIPSEAPSLASPLPKSTDFPGYGSDYLNKDVSLFRMEPYGVDDTRGSRV 75

Query: 286 HSEPNIKAYSSLEDPDLSAKRDTPLGINSSVPD-VVNNERPISKSNYDALPVSPGESNIL 462
           HSE N  +Y+ LED DLS KRD  LG+++ VPD + NNER ISKSNYDALPVS  ESNIL
Sbjct: 76  HSEHNATSYNPLEDVDLSTKRDALLGVSTGVPDPIANNERSISKSNYDALPVSAAESNIL 135

Query: 463 FVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMILCFVEFSDAKCALTAME 642
           FVGGLPKDCTRREVGHLFRPFIGYKDI+VVHKEPRRSGDKAMI CFVEF++ KCALTAME
Sbjct: 136 FVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCALTAME 195

Query: 643 ALQGYKFDDKKPDSSTLKIQFAHFPFRPPPDHGQ 744
           ALQGYKFDDKKPDS TLKI+FAHFPFRPP D GQ
Sbjct: 196 ALQGYKFDDKKPDSPTLKIKFAHFPFRPPTDDGQ 229


>ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
          Length = 228

 Score =  312 bits (799), Expect = 1e-82
 Identities = 161/209 (77%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
 Frame = +1

Query: 118 GASIARSSFAGYIPSEASPHPNSTEFRGIGSDYLQKDVSLFRMGPYGVDDAVGSRVHSEP 297
           GASIARSSFAGYIPSE  P  ++TE R IGSDYLQ+D+ LF    Y  DD  GSRVHSEP
Sbjct: 16  GASIARSSFAGYIPSE--PSNSTTELRSIGSDYLQRDIGLF----YSADDTFGSRVHSEP 69

Query: 298 NIKAYSSLEDPDLSAKRDT-PLGINSSVPDVVNNERPISKSNYDALPVSPGESNILFVGG 474
            +K YS L DPD S KRDT PL I   VPDV N+ERP SKS+YD LP+S  +SNILFVGG
Sbjct: 70  -VKGYSPLADPDPSKKRDTTPLSITHGVPDV-NSERPASKSSYDGLPISAADSNILFVGG 127

Query: 475 LPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMILCFVEFSDAKCALTAMEALQG 654
           LP DCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAM LCFVEF D+KCALTAMEALQG
Sbjct: 128 LPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSKCALTAMEALQG 187

Query: 655 YKFDDKKPDSSTLKIQFAHFPFRPPPDHG 741
           YKFDDKKPDS TLKI+FAHFPFR P DHG
Sbjct: 188 YKFDDKKPDSPTLKIEFAHFPFRLPSDHG 216


>ref|NP_001242381.1| uncharacterized protein LOC100816255 [Glycine max]
           gi|255647054|gb|ACU23995.1| unknown [Glycine max]
          Length = 220

 Score =  312 bits (799), Expect = 1e-82
 Identities = 162/209 (77%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
 Frame = +1

Query: 118 GASIARSSFAGYIPSEASPHPNSTEFRGIGSDYLQKDVSLFRMGPYGVDDAVGSRVHSEP 297
           GASIARSSFAGYIPSE S   NSTE RGIGSDYLQ+D+ LF    Y  D  +GSRVHSEP
Sbjct: 16  GASIARSSFAGYIPSEPS---NSTELRGIGSDYLQRDIGLF----YSADGTLGSRVHSEP 68

Query: 298 NIKAYSSLEDPDLSAKRDT-PLGINSSVPDVVNNERPISKSNYDALPVSPGESNILFVGG 474
            +K YS L DP LS KRDT PLGIN+ VPDV ++ERP SKS+YD LP+S  +SNILFVGG
Sbjct: 69  -VKGYSPLADPCLSKKRDTTPLGINNGVPDV-SSERPASKSSYDGLPISAADSNILFVGG 126

Query: 475 LPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMILCFVEFSDAKCALTAMEALQG 654
           LPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAM LCFVEF D+ CALTA+E LQG
Sbjct: 127 LPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSNCALTALETLQG 186

Query: 655 YKFDDKKPDSSTLKIQFAHFPFRPPPDHG 741
           YKFDDKKPDS TLKIQ AHFPFR P DHG
Sbjct: 187 YKFDDKKPDSPTLKIQPAHFPFRLPSDHG 215


>gb|AFK48970.1| unknown [Lotus japonicus]
          Length = 229

 Score =  306 bits (785), Expect = 5e-81
 Identities = 161/216 (74%), Positives = 178/216 (82%), Gaps = 8/216 (3%)
 Frame = +1

Query: 118 GASIARSSFAGYIPSE----ASPHP---NSTEFRGIGSDYLQKDVSLFRMGPYG-VDDAV 273
           GASIARSSFAGYIPSE    ASP+P   NS E RGIG+DYLQ D++L R+GPY  VDDAV
Sbjct: 18  GASIARSSFAGYIPSEPVSLASPYPRFSNSAELRGIGADYLQNDINLSRVGPYSSVDDAV 77

Query: 274 GSRVHSEPNIKAYSSLEDPDLSAKRDTPLGINSSVPDVVNNERPISKSNYDALPVSPGES 453
            SRV SEPNIK YS L+DP L  KRDT LG+N   PDV ++ERPI K+N + L     +S
Sbjct: 78  SSRVLSEPNIKGYSPLDDPVLRTKRDTSLGVN---PDV-SSERPIPKANREGL----ADS 129

Query: 454 NILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMILCFVEFSDAKCALT 633
           N+LFV  LP+DCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAM+LCFVEF D+KCALT
Sbjct: 130 NVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCALT 189

Query: 634 AMEALQGYKFDDKKPDSSTLKIQFAHFPFRPPPDHG 741
           AMEALQGYKFDDKKPDS TLKIQFAHFPFRPP D+G
Sbjct: 190 AMEALQGYKFDDKKPDSRTLKIQFAHFPFRPPADNG 225


>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  236 bits (601), Expect = 1e-59
 Identities = 128/222 (57%), Positives = 152/222 (68%), Gaps = 16/222 (7%)
 Frame = +1

Query: 124 SIARSSFAGYIPSEASPHP-----NSTEFRGIGSDYLQKDVSLFRMGPYGVDDAVGSRVH 288
           SI RSSF GY+P + S         + +  G  SDY  KD+   R G +  DD +G RV 
Sbjct: 16  SIPRSSFPGYLPLDPSVSAAHHLWGTNDLHGAPSDYPPKDILPVRPGAHDFDDIMGIRVP 75

Query: 289 SEP---------NIKAYSS-LEDPDL-SAKRDTPLGINSSVPDVVNNERPISKSNYDALP 435
            +P         NIK Y + +EDP+L   +RD   GI+  +PD+   ERP S  N ++LP
Sbjct: 76  PKPVIGGFTATTNIKGYPNPVEDPNLIGQRRDVAHGISPGIPDI---ERPSSFGNVESLP 132

Query: 436 VSPGESNILFVGGLPKDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMILCFVEFSD 615
               ESNILFV GLPKDCTRREVGHLFRPFIG+K+IRVVHKEPR SGDKAM+LCFVEF+D
Sbjct: 133 PPVQESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFND 192

Query: 616 AKCALTAMEALQGYKFDDKKPDSSTLKIQFAHFPFRPPPDHG 741
           A C+ TA+EALQGYKFDDKKPDS TL+IQFAHFPFR P D G
Sbjct: 193 ASCSRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPSDLG 234


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