BLASTX nr result

ID: Glycyrrhiza24_contig00015948 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015948
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l...   326   2e-87
ref|XP_003607840.1| Peroxisome biogenesis factor [Medicago trunc...   262   3e-68
emb|CBI20540.3| unnamed protein product [Vitis vinifera]              258   4e-67
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l...   258   4e-67
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici...   250   1e-64

>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
          Length = 1130

 Score =  326 bits (835), Expect = 2e-87
 Identities = 164/192 (85%), Positives = 173/192 (90%)
 Frame = -3

Query: 576  SASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTVAKSLENREDILAHIIFVSCSKLALE 397
            SASGLWFGS+NLPLPGHVLIYGP GSGKTILARTVAKSLENREDILAHIIFVSCSKLALE
Sbjct: 573  SASGLWFGSHNLPLPGHVLIYGPSGSGKTILARTVAKSLENREDILAHIIFVSCSKLALE 632

Query: 396  KVPIIRKELANHITEALNHAPSIVIFDDLDSIISTPDSEGSQPSMSVAGLTDFLVDIMDE 217
            KVP+IR+ELANH+TEALNHAPS+VIFDDLDSIISTPDSEGSQ  MSVAGLTDFL+DIMDE
Sbjct: 633  KVPVIRQELANHVTEALNHAPSVVIFDDLDSIISTPDSEGSQLLMSVAGLTDFLIDIMDE 692

Query: 216  YGEKRQKSCGYGPIAFIAXXXXXXXXXXXXXXSGRFDFHIKLPAPAASERRAMLKHEIQR 37
            Y EKRQKSCG+GPIAFIA              SGRFDFHIKLPAPAASERRAMLKHEIQR
Sbjct: 693  YREKRQKSCGFGPIAFIASIQSLEKIPQSLSSSGRFDFHIKLPAPAASERRAMLKHEIQR 752

Query: 36   RHLRCDEDILLD 1
            R L+CD+DILLD
Sbjct: 753  RQLQCDDDILLD 764


>ref|XP_003607840.1| Peroxisome biogenesis factor [Medicago truncatula]
            gi|355508895|gb|AES90037.1| Peroxisome biogenesis factor
            [Medicago truncatula]
          Length = 1097

 Score =  262 bits (669), Expect = 3e-68
 Identities = 136/168 (80%), Positives = 145/168 (86%)
 Frame = -3

Query: 504  GSGKTILARTVAKSLENREDILAHIIFVSCSKLALEKVPIIRKELANHITEALNHAPSIV 325
            GSGKTILA  VAKSLENR DILAH IFVSCSKLALEKVPIIR+ELANHITEALNHAPS+V
Sbjct: 706  GSGKTILAMNVAKSLENRADILAHTIFVSCSKLALEKVPIIRQELANHITEALNHAPSVV 765

Query: 324  IFDDLDSIISTPDSEGSQPSMSVAGLTDFLVDIMDEYGEKRQKSCGYGPIAFIAXXXXXX 145
            IFDDLD IIST DSEGSQPSMSVAGLTDFLV+IMDEYGEKR+KSCG+GPIAFIA      
Sbjct: 766  IFDDLDGIISTSDSEGSQPSMSVAGLTDFLVNIMDEYGEKRRKSCGFGPIAFIATIQSLE 825

Query: 144  XXXXXXXXSGRFDFHIKLPAPAASERRAMLKHEIQRRHLRCDEDILLD 1
                      RFDFHIKLPAPAASER+AMLKH IQRRHL+C++DILLD
Sbjct: 826  NIPQSLR---RFDFHIKLPAPAASERKAMLKHIIQRRHLQCNDDILLD 870


>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  258 bits (660), Expect = 4e-67
 Identities = 126/192 (65%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
 Frame = -3

Query: 573  ASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTVAKSLENREDILAHIIFVSCSKLALEK 394
            ASG+WF +YNLPLPGHVLIYGPPGSGKT+LARTVAK+LE +ED+L HI+FVSCS+LALEK
Sbjct: 558  ASGMWFSTYNLPLPGHVLIYGPPGSGKTLLARTVAKALEEQEDLLTHIVFVSCSQLALEK 617

Query: 393  VPIIRKELANHITEALNHAPSIVIFDDLDSII-STPDSEGSQPSMSVAGLTDFLVDIMDE 217
               IR+ L++++++AL+H PS+VIFDDLD II S+ D EGSQPS SV  LT++L DI+DE
Sbjct: 618  AVTIRQALSSYLSDALDHVPSLVIFDDLDLIISSSSDLEGSQPSTSVTALTEYLTDILDE 677

Query: 216  YGEKRQKSCGYGPIAFIAXXXXXXXXXXXXXXSGRFDFHIKLPAPAASERRAMLKHEIQR 37
            YGEKR+ SCG GP+AFIA              SGRFDFH++LPAPAA+ER A+LKHEIQ+
Sbjct: 678  YGEKRKNSCGIGPLAFIASAQSLENVPQSLSSSGRFDFHVQLPAPAATERMAILKHEIQK 737

Query: 36   RHLRCDEDILLD 1
            R L+C +DIL D
Sbjct: 738  RSLQCADDILSD 749


>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
          Length = 1134

 Score =  258 bits (660), Expect = 4e-67
 Identities = 126/192 (65%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
 Frame = -3

Query: 573  ASGLWFGSYNLPLPGHVLIYGPPGSGKTILARTVAKSLENREDILAHIIFVSCSKLALEK 394
            ASG+WF +YNLPLPGHVLIYGPPGSGKT+LARTVAK+LE +ED+L HI+FVSCS+LALEK
Sbjct: 578  ASGMWFSTYNLPLPGHVLIYGPPGSGKTLLARTVAKALEEQEDLLTHIVFVSCSQLALEK 637

Query: 393  VPIIRKELANHITEALNHAPSIVIFDDLDSII-STPDSEGSQPSMSVAGLTDFLVDIMDE 217
               IR+ L++++++AL+H PS+VIFDDLD II S+ D EGSQPS SV  LT++L DI+DE
Sbjct: 638  AVTIRQALSSYLSDALDHVPSLVIFDDLDLIISSSSDLEGSQPSTSVTALTEYLTDILDE 697

Query: 216  YGEKRQKSCGYGPIAFIAXXXXXXXXXXXXXXSGRFDFHIKLPAPAASERRAMLKHEIQR 37
            YGEKR+ SCG GP+AFIA              SGRFDFH++LPAPAA+ER A+LKHEIQ+
Sbjct: 698  YGEKRKNSCGIGPLAFIASAQSLENVPQSLSSSGRFDFHVQLPAPAATERMAILKHEIQK 757

Query: 36   RHLRCDEDILLD 1
            R L+C +DIL D
Sbjct: 758  RSLQCADDILSD 769


>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
            gi|223543202|gb|EEF44734.1| peroxisome biogenesis factor,
            putative [Ricinus communis]
          Length = 1137

 Score =  250 bits (638), Expect = 1e-64
 Identities = 129/192 (67%), Positives = 150/192 (78%), Gaps = 2/192 (1%)
 Frame = -3

Query: 570  SGLWFGSYNLPLPGHVLIYGPPGSGKTILARTVAKSLENREDILAHIIFVSCSKLALEKV 391
            SG+ F +YNLP PGHVLIYGP GSGKTILAR VAKSLE  ED+LAHI+FV CS LALEK 
Sbjct: 581  SGMLFSTYNLPFPGHVLIYGPHGSGKTILARAVAKSLEEHEDLLAHIVFVGCSALALEKA 640

Query: 390  PIIRKELANHITEALNHAPSIVIFDDLDSII-STPDSEG-SQPSMSVAGLTDFLVDIMDE 217
             IIR+ L+ +I+EAL+HAPS++IFDDLD+II S+ D EG  QPS SV  LT FL DIMDE
Sbjct: 641  SIIRQALSAYISEALDHAPSLIIFDDLDTIISSSSDGEGPPQPSTSVVALTKFLTDIMDE 700

Query: 216  YGEKRQKSCGYGPIAFIAXXXXXXXXXXXXXXSGRFDFHIKLPAPAASERRAMLKHEIQR 37
            YGEKR+ SCG GPIAFIA              SGRFDFH++LPAPAASER+A+L+HEI R
Sbjct: 701  YGEKRKSSCGIGPIAFIASVHTLESIPQSLSSSGRFDFHVQLPAPAASERQAILRHEIHR 760

Query: 36   RHLRCDEDILLD 1
            R L+C +DILLD
Sbjct: 761  RSLQCTDDILLD 772


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