BLASTX nr result

ID: Glycyrrhiza24_contig00015938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00015938
         (1064 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   484   e-134
ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Gl...   482   e-134
ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair h...   481   e-133
ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ric...   475   e-132
emb|CBI32371.3| unnamed protein product [Vitis vinifera]              473   e-131

>ref|XP_003548117.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  484 bits (1246), Expect = e-134
 Identities = 241/253 (95%), Positives = 246/253 (97%)
 Frame = -3

Query: 1062 KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKL 883
            KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVN+WNENGILKEIMQHKL
Sbjct: 507  KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQHKL 566

Query: 882  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 703
            VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ
Sbjct: 567  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 626

Query: 702  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 523
            YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR
Sbjct: 627  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 686

Query: 522  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGCTGKKTLLSQEDLE 343
            HDKRSKLP WILSHL DAHLNLSTDMALHIAREFLRKMAQPYDKTG TG+KTLLSQEDLE
Sbjct: 687  HDKRSKLPSWILSHLHDAHLNLSTDMALHIAREFLRKMAQPYDKTGGTGRKTLLSQEDLE 746

Query: 342  KMVFEGSMNDMLY 304
            KM   G ++DM+Y
Sbjct: 747  KMAVSG-LDDMMY 758


>ref|XP_003518602.1| PREDICTED: DNA repair helicase UVH6-like [Glycine max]
          Length = 758

 Score =  482 bits (1240), Expect = e-134
 Identities = 239/253 (94%), Positives = 245/253 (96%)
 Frame = -3

Query: 1062 KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKL 883
            KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVN+WNENGILKEIMQHKL
Sbjct: 507  KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNTWNENGILKEIMQHKL 566

Query: 882  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 703
            VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ
Sbjct: 567  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 626

Query: 702  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 523
            YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR
Sbjct: 627  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 686

Query: 522  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGCTGKKTLLSQEDLE 343
            HDKRSKLP WILSHL DAHLNLSTDMALH+AR+FLRKMAQPYDKTG TG+KTLLSQEDLE
Sbjct: 687  HDKRSKLPSWILSHLHDAHLNLSTDMALHVARDFLRKMAQPYDKTGGTGRKTLLSQEDLE 746

Query: 342  KMVFEGSMNDMLY 304
            KM   G M D++Y
Sbjct: 747  KMAVSG-MGDVMY 758


>ref|XP_004148902.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair helicase UVH6-like
            [Cucumis sativus]
          Length = 919

 Score =  481 bits (1238), Expect = e-133
 Identities = 238/253 (94%), Positives = 245/253 (96%)
 Frame = -3

Query: 1062 KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKL 883
            KFDMRSDLGVVRNYGRLLLEM S VPDGIVCFFVSYSYMDGI+NSWNE GILKEIMQHKL
Sbjct: 668  KFDMRSDLGVVRNYGRLLLEMVSAVPDGIVCFFVSYSYMDGIINSWNETGILKEIMQHKL 727

Query: 882  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 703
            VFIETQDVVETTLALDNYRKACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ
Sbjct: 728  VFIETQDVVETTLALDNYRKACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 787

Query: 702  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 523
            YTLSKILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR
Sbjct: 788  YTLSKILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 847

Query: 522  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGCTGKKTLLSQEDLE 343
            HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G +G+KTLLSQEDLE
Sbjct: 848  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGSSGRKTLLSQEDLE 907

Query: 342  KMVFEGSMNDMLY 304
            KM  E +MN+MLY
Sbjct: 908  KM-SEANMNEMLY 919


>ref|XP_002520757.1| DNA repair helicase rad3/xp-d, putative [Ricinus communis]
            gi|223540142|gb|EEF41719.1| DNA repair helicase
            rad3/xp-d, putative [Ricinus communis]
          Length = 758

 Score =  475 bits (1223), Expect = e-132
 Identities = 234/253 (92%), Positives = 243/253 (96%)
 Frame = -3

Query: 1062 KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKL 883
            KFDMRSD GV RNYG+LL+EM SVVPDGIVCFFVSYSYMDGI+NSWNE GILKEIMQHKL
Sbjct: 507  KFDMRSDPGVARNYGKLLVEMVSVVPDGIVCFFVSYSYMDGIINSWNETGILKEIMQHKL 566

Query: 882  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 703
            VFIETQDVVETTLALDNYR+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFG+PFQ
Sbjct: 567  VFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGIPFQ 626

Query: 702  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 523
            YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR
Sbjct: 627  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 686

Query: 522  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGCTGKKTLLSQEDLE 343
            HDKRSKLPGWILSHLRDA+LNLSTDMALHIAREFLRKMAQPYDKTG +G+KTLLSQEDLE
Sbjct: 687  HDKRSKLPGWILSHLRDANLNLSTDMALHIAREFLRKMAQPYDKTGASGRKTLLSQEDLE 746

Query: 342  KMVFEGSMNDMLY 304
            KM  E  M DMLY
Sbjct: 747  KMA-ESGMQDMLY 758


>emb|CBI32371.3| unnamed protein product [Vitis vinifera]
          Length = 922

 Score =  473 bits (1217), Expect = e-131
 Identities = 233/253 (92%), Positives = 246/253 (97%)
 Frame = -3

Query: 1062 KFDMRSDLGVVRNYGRLLLEMASVVPDGIVCFFVSYSYMDGIVNSWNENGILKEIMQHKL 883
            KFDMRSD GVVRNYGRLLLEM SVVPDGIVCFFVSYSYMDGIVN+WNE+GILKEIMQHKL
Sbjct: 671  KFDMRSDPGVVRNYGRLLLEMVSVVPDGIVCFFVSYSYMDGIVNTWNESGILKEIMQHKL 730

Query: 882  VFIETQDVVETTLALDNYRKACDCGRGAIFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 703
            VFIETQDVVETTLALDNYR+ACDCGRGA+FFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ
Sbjct: 731  VFIETQDVVETTLALDNYRRACDCGRGAVFFSVARGKVAEGIDFDRHYGRLVIMFGVPFQ 790

Query: 702  YTLSKILLARLEYLRDTFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 523
            YTLS+ILLARLEYLR+TFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR
Sbjct: 791  YTLSRILLARLEYLRETFQIKEGDFLTFDALRQAAQCVGRVIRSKADYGMMIFADKRYSR 850

Query: 522  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKTGCTGKKTLLSQEDLE 343
            HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDK G +G+KTLLS+EDLE
Sbjct: 851  HDKRSKLPGWILSHLRDAHLNLSTDMALHIAREFLRKMAQPYDKAGVSGRKTLLSEEDLE 910

Query: 342  KMVFEGSMNDMLY 304
            KM  +G+ N+ML+
Sbjct: 911  KM-GDGTTNEMLF 922


Top